RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 UFSP1Q6NVU6 142 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 CYP2G1PQ6ZSU1 146 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 TCF24Q7RTU0 167 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 TMEM61Q8N0U2 210 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 TMEM252Q8N6L7 170 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 OR10G8Q8NGN5 311 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 ST6GAL2Q96JF0 529 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 PRAC1Q96KF2 57 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 TRGV9Q99603 122 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 TMEM147Q9BVK8 224 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 GGACTQ9BVM4 153 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 NPVFQ9HCQ7 196 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 BIN3Q9NQY0 253 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 LYRM2Q9NU23 88 aaPredicted RBP2.03□□□□□ -2.08
SKP1-204ENST00000517691 UQCC1Q9NVA1 299 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 OR5AC2Q9NZP5 309 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 DOK5Q9P104 306 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 SMAD5-AS1Q9Y6J3 95 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 NOTCH3Q9UM47 2321 aa2.03□□□□□ -2.08
SKP1-204ENST00000517691 IGKV1OR2-108A0A075B7D4 117 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 TRAV8-4A0A0B4J246 113 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 UBE2L5PA0A1B0GUS4 154 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 A6NDN8 102 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 OR4C46A6NHA9 309 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 PMS2P5A8MQ11 134 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 AGPAT2O15120 278 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 HYPMO75409 117 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 NXPH4O95158 308 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 CFDP00746 253 aaPredicted RBP2.02□□□□□ -2.09
SKP1-204ENST00000517691 P01737 135 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 CD7P09564 240 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 LINC00869P0C866 280 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 FGF7P21781 194 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 PFN2P35080 140 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 CTRLP40313 264 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 SELENOTP62341 195 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 MUC21Q5SSG8 566 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 OR8I2Q8N0Y5 310 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 DEFB125Q8N687 156 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 ZNF709Q8N972 641 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 OR11H7Q8NGC8 314 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 OR5C1Q8NGR4 320 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 C11orf52Q96A22 123 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 SMIM12Q96EX1 92 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 SMIM3Q9BZL3 60 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 SLC25A22Q9H936 323 aa2.02□□□□□ -2.09
SKP1-204ENST00000517691 FXYD6-FXYD2A0A087WZ82 144 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 IGHV3-38A0A0C4DH36 116 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 C8orf87E5RJ46 101 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 FNDC10F2Z333 226 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 K7EQG2 157 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 COX7A2P2O60397 106 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 CRYGDP07320 174 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 AKR1C3P42330 323 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 CMC4P56277 68 aaPredicted RBP2.01□□□□□ -2.09
SKP1-204ENST00000517691 RAB2AP61019 212 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 GAGE5Q13069 117 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 GAGE6Q13070 117 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 Q5BKY6 102 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 SPATA31B1PQ5VZV4 182 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 LEMD1Q68G75 181 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 NEGR1Q7Z3B1 354 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 OR2T35Q8NGX2 323 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 SCGB1C1Q8TD33 95 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 ZNF414Q96IQ9 312 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 BTF3L4Q96K17 158 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 C9orf85Q96MD7 179 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 LINC00052Q96N35 136 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 MGST2Q99735 147 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 WFDC10AQ9H1F0 79 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 C11orf1Q9H5F2 150 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 HIGD1AQ9Y241 93 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 IGHV3OR16-12A0A075B7B8 117 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 FAM236DA0A1B0GTK5 79 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 A0A1B0GXF2 115 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 C17orf112F2Z3M2 114 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 PDE6DO43924 150 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 SNRPCP09234 159 aaKnown RBP2.01□□□□□ -2.09
SKP1-204ENST00000517691 OR10J4P0C629 311 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 ZNF688P0C7X2 276 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 FAM236CP0DP71 79 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 DEFB131AP59861 70 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 ERVFC1-1P60608 527 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 SNRPD3P62318 126 aaKnown RBP2.01□□□□□ -2.09
SKP1-204ENST00000517691 REG3AQ06141 175 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 TTC32Q5I0X7 151 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 PSMG4Q5JS54 123 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 C1orf194Q5T5A4 169 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 FAM78BQ5VT40 261 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 C10orf113Q5VZT2 155 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 MIC13Q5XKP0 118 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 Q6ZRP5 223 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 LINC00305Q7Z4B0 112 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 C11orf72Q8NBR9 251 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 OR13C6PQ8NH95 151 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 RPL36ALQ969Q0 106 aaKnown RBP2.01□□□□□ -2.09
SKP1-204ENST00000517691 FMC1Q96HJ9 113 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 C12orf57Q99622 126 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 SCRT1Q9BWW7 348 aa2.01□□□□□ -2.09
SKP1-204ENST00000517691 SLC39A9Q9NUM3 307 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 1246.3 ms