RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 K7EQM0 130 aa11.97□□□□□ -0.49
DDX41-217ENST00000515562 M0R2P5 195 aa11.97□□□□□ -0.49
DDX41-217ENST00000515562 ATP6V0CP27449 155 aa11.97□□□□□ -0.49
DDX41-217ENST00000515562 SERF2P84101 59 aa11.97□□□□□ -0.49
DDX41-217ENST00000515562 LYPD5Q6UWN5 251 aa11.97□□□□□ -0.49
DDX41-217ENST00000515562 RAB24Q969Q5 203 aa11.97□□□□□ -0.49
DDX41-217ENST00000515562 C9JCJ5 164 aa11.96□□□□□ -0.49
DDX41-217ENST00000515562 K7EQD1 137 aa11.96□□□□□ -0.49
DDX41-217ENST00000515562 TYMSP04818 313 aa11.96□□□□□ -0.49
DDX41-217ENST00000515562 GCHFRP30047 84 aa11.96□□□□□ -0.49
DDX41-217ENST00000515562 OR4C5Q8NGB2 326 aa11.96□□□□□ -0.49
DDX41-217ENST00000515562 SUN5Q8TC36 379 aa11.96□□□□□ -0.49
DDX41-217ENST00000515562 TVP23CQ96ET8 276 aa11.96□□□□□ -0.49
DDX41-217ENST00000515562 GNRH2O43555 120 aa11.95□□□□□ -0.5
DDX41-217ENST00000515562 TCRAP04437 139 aa11.95□□□□□ -0.5
DDX41-217ENST00000515562 GIPP09681 153 aaPredicted RBP11.95□□□□□ -0.5
DDX41-217ENST00000515562 GYPEP15421 78 aa11.95□□□□□ -0.5
DDX41-217ENST00000515562 TXNDC17Q9BRA2 123 aa11.95□□□□□ -0.5
DDX41-217ENST00000515562 TMEM167BQ9NRX6 74 aa11.95□□□□□ -0.5
DDX41-217ENST00000515562 LRP1BQ9NZR2 4599 aa11.94□□□□□ -0.5
DDX41-217ENST00000515562 TRAV9-2A0A087WT02 112 aa11.94□□□□□ -0.5
DDX41-217ENST00000515562 K7EP13 123 aa11.94□□□□□ -0.5
DDX41-217ENST00000515562 CXorf1O96002 111 aa11.94□□□□□ -0.5
DDX41-217ENST00000515562 ZFP69Q49AA0 526 aa11.94□□□□□ -0.5
DDX41-217ENST00000515562 Q6ZRN7 208 aaPredicted RBP11.94□□□□□ -0.5
DDX41-217ENST00000515562 INO80EQ8NBZ0 244 aaPredicted RBP11.94□□□□□ -0.5
DDX41-217ENST00000515562 ACTR3CQ9C0K3 210 aaPredicted RBP11.94□□□□□ -0.5
DDX41-217ENST00000515562 TNFSF18Q9UNG2 199 aa11.94□□□□□ -0.5
DDX41-217ENST00000515562 LY96Q9Y6Y9 160 aa11.94□□□□□ -0.5
DDX41-217ENST00000515562 HSPG2P98160 4391 aa11.94□□□□□ -0.5
DDX41-217ENST00000515562 FBLL1A6NHQ2 334 aaKnown RBP11.93□□□□□ -0.5
DDX41-217ENST00000515562 SH2D6Q7Z4S9 175 aa11.93□□□□□ -0.5
DDX41-217ENST00000515562 NFE4Q86UQ8 179 aa11.93□□□□□ -0.5
DDX41-217ENST00000515562 SGK494Q96LW2 274 aa11.93□□□□□ -0.5
DDX41-217ENST00000515562 SH3BGRL3Q9H299 93 aa11.93□□□□□ -0.5
DDX41-217ENST00000515562 BORCS7-ASMTA0A0B4J1R7 106 aa11.92□□□□□ -0.5
DDX41-217ENST00000515562 GGTLC3B5MD39 225 aa11.92□□□□□ -0.5
DDX41-217ENST00000515562 TAAR5O14804 337 aa11.92□□□□□ -0.5
DDX41-217ENST00000515562 KRTAP10-2P60368 255 aa11.92□□□□□ -0.5
DDX41-217ENST00000515562 CYB561D1Q8N8Q1 229 aa11.92□□□□□ -0.5
DDX41-217ENST00000515562 PSG8Q9UQ74 426 aa11.92□□□□□ -0.5
DDX41-217ENST00000515562 ABCA13Q86UQ4 5058 aa11.92□□□□□ -0.5
DDX41-217ENST00000515562 EREGO14944 169 aa11.91□□□□□ -0.5
DDX41-217ENST00000515562 GCGP01275 180 aa11.91□□□□□ -0.5
DDX41-217ENST00000515562 PFN1P07737 140 aaKnown RBP11.91□□□□□ -0.5
DDX41-217ENST00000515562 ERVFC1-1P60608 527 aa11.91□□□□□ -0.5
DDX41-217ENST00000515562 Q5BKY6 102 aa11.91□□□□□ -0.5
DDX41-217ENST00000515562 TMEM75Q8N9X5 138 aa11.91□□□□□ -0.5
DDX41-217ENST00000515562 EPDR1Q9UM22 224 aa11.91□□□□□ -0.5
DDX41-217ENST00000515562 FXYD6-FXYD2A0A087WZ82 144 aa11.9□□□□□ -0.5
DDX41-217ENST00000515562 RNF222A6NCQ9 220 aa11.9□□□□□ -0.5
DDX41-217ENST00000515562 CIDEAO60543 219 aa11.9□□□□□ -0.5
DDX41-217ENST00000515562 GATA1P15976 413 aaPredicted RBP11.9□□□□□ -0.5
DDX41-217ENST00000515562 EVI2AP22794 236 aa11.9□□□□□ -0.5
DDX41-217ENST00000515562 SUMO1P63165 101 aaKnown RBP11.9□□□□□ -0.5
DDX41-217ENST00000515562 FLI1Q01543 452 aaPredicted RBP11.9□□□□□ -0.5
DDX41-217ENST00000515562 SMUG1Q53HV7 270 aa11.9□□□□□ -0.5
DDX41-217ENST00000515562 WFDC10BQ8IUB3 73 aa11.9□□□□□ -0.5
DDX41-217ENST00000515562 MAPKAPK5-AS1Q8N8E1 139 aa11.9□□□□□ -0.5
DDX41-217ENST00000515562 A0A1W2PRE2 83 aa11.89□□□□□ -0.51
DDX41-217ENST00000515562 IGLV2-11P01706 119 aa11.89□□□□□ -0.51
DDX41-217ENST00000515562 DNAH10OSP0CZ25 163 aa11.89□□□□□ -0.51
DDX41-217ENST00000515562 ZNF80P51504 273 aaPredicted RBP11.89□□□□□ -0.51
DDX41-217ENST00000515562 ZNF876PQ49A33 203 aa11.89□□□□□ -0.51
DDX41-217ENST00000515562 SAPCD1Q5SSQ6 148 aa11.89□□□□□ -0.51
DDX41-217ENST00000515562 RPL7L1Q6DKI1 246 aaKnown RBP11.89□□□□□ -0.51
DDX41-217ENST00000515562 NHLRC2Q8NBF2 726 aa11.89□□□□□ -0.51
DDX41-217ENST00000515562 TIRAPP58753 221 aa11.88□□□□□ -0.51
DDX41-217ENST00000515562 PRNTQ86SH4 94 aa11.88□□□□□ -0.51
DDX41-217ENST00000515562 C10orf126Q8N4M7 172 aa11.88□□□□□ -0.51
DDX41-217ENST00000515562 OR2T35Q8NGX2 323 aa11.88□□□□□ -0.51
DDX41-217ENST00000515562 C9orf85Q96MD7 179 aa11.88□□□□□ -0.51
DDX41-217ENST00000515562 MSRB1Q9NZV6 116 aa11.88□□□□□ -0.51
DDX41-217ENST00000515562 C11orf21Q9P2W6 132 aa11.88□□□□□ -0.51
DDX41-217ENST00000515562 LOC100131303A0A0U1RQF7 123 aa11.87□□□□□ -0.51
DDX41-217ENST00000515562 CTXND1A0A1B0GTU2 59 aa11.87□□□□□ -0.51
DDX41-217ENST00000515562 PPT1P50897 306 aa11.87□□□□□ -0.51
DDX41-217ENST00000515562 CDPF1Q6NVV7 123 aa11.87□□□□□ -0.51
DDX41-217ENST00000515562 PRADC1Q9BSG0 188 aa11.87□□□□□ -0.51
DDX41-217ENST00000515562 KRTAP4-5Q9BYR2 181 aa11.87□□□□□ -0.51
DDX41-217ENST00000515562 PGPEP1Q9NXJ5 209 aa11.87□□□□□ -0.51
DDX41-217ENST00000515562 RS1O15537 224 aa11.86□□□□□ -0.51
DDX41-217ENST00000515562 RHOHQ15669 191 aa11.86□□□□□ -0.51
DDX41-217ENST00000515562 CFAP126Q5VTH2 177 aa11.86□□□□□ -0.51
DDX41-217ENST00000515562 PTH2Q96A98 100 aa11.86□□□□□ -0.51
DDX41-217ENST00000515562 BOLA1Q9Y3E2 137 aa11.86□□□□□ -0.51
DDX41-217ENST00000515562 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
DDX41-217ENST00000515562 TRBV6-4A0A1B0GX49 114 aa11.85□□□□□ -0.51
DDX41-217ENST00000515562 IFNA7P01567 189 aa11.85□□□□□ -0.51
DDX41-217ENST00000515562 CRYGDP07320 174 aa11.85□□□□□ -0.51
DDX41-217ENST00000515562 ZNF726P1Q15940 193 aa11.85□□□□□ -0.51
DDX41-217ENST00000515562 AKR1C8PQ5T2L2 129 aa11.85□□□□□ -0.51
DDX41-217ENST00000515562 SLC25A29Q8N8R3 303 aa11.85□□□□□ -0.51
DDX41-217ENST00000515562 NKX6-2Q9C056 277 aaPredicted RBP11.85□□□□□ -0.51
DDX41-217ENST00000515562 APOBP04114 4563 aaKnown RBP11.85□□□□□ -0.51
DDX41-217ENST00000515562 DNAH5Q8TE73 4624 aa11.84□□□□□ -0.51
DDX41-217ENST00000515562 MGST1P10620 155 aaKnown RBP11.84□□□□□ -0.51
DDX41-217ENST00000515562 ZNF506Q5JVG8 444 aa11.84□□□□□ -0.51
DDX41-217ENST00000515562 Q8N1X5 172 aa11.84□□□□□ -0.51
DDX41-217ENST00000515562 ARL2-SNX15V9GYD0 113 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms