RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 S100A16Q96FQ6 103 aaKnown RBP7.8□□□□□ -1.16
SMAD1-216ENST00000515527 GFRA4Q9GZZ7 299 aa7.8□□□□□ -1.16
SMAD1-216ENST00000515527 COX7A2P2O60397 106 aa7.79□□□□□ -1.16
SMAD1-216ENST00000515527 TYMSP04818 313 aa7.79□□□□□ -1.16
SMAD1-216ENST00000515527 RPP30P78346 268 aaKnown RBP7.79□□□□□ -1.16
SMAD1-216ENST00000515527 ASB16-AS1Q495Z4 193 aa7.79□□□□□ -1.16
SMAD1-216ENST00000515527 LHFPL1Q86WI0 220 aa7.79□□□□□ -1.16
SMAD1-216ENST00000515527 RAB2BQ8WUD1 216 aa7.79□□□□□ -1.16
SMAD1-216ENST00000515527 NDUFB11Q9NX14 153 aa7.79□□□□□ -1.16
SMAD1-216ENST00000515527 TRBV7-9A0A0J9YWB2 115 aa7.78□□□□□ -1.16
SMAD1-216ENST00000515527 IGLV7-43P04211 117 aa7.78□□□□□ -1.16
SMAD1-216ENST00000515527 CYCSP99999 105 aaKnown RBP7.78□□□□□ -1.16
SMAD1-216ENST00000515527 MXD1Q05195 221 aa7.78□□□□□ -1.16
SMAD1-216ENST00000515527 PXDC1Q5TGL8 231 aa7.78□□□□□ -1.16
SMAD1-216ENST00000515527 LINC00269Q8N2A0 174 aa7.78□□□□□ -1.16
SMAD1-216ENST00000515527 EXOC3-AS1Q8N2X6 119 aa7.78□□□□□ -1.16
SMAD1-216ENST00000515527 NAA60Q9H7X0 242 aa7.78□□□□□ -1.16
SMAD1-216ENST00000515527 TIMM9Q9Y5J7 89 aa7.78□□□□□ -1.16
SMAD1-216ENST00000515527 TRBV19A0A075B6N1 114 aa7.77□□□□□ -1.17
SMAD1-216ENST00000515527 AGPAT2O15120 278 aa7.77□□□□□ -1.17
SMAD1-216ENST00000515527 C14orf178Q8N769 122 aaPredicted RBP7.77□□□□□ -1.17
SMAD1-216ENST00000515527 OR51S1Q8NGJ8 323 aa7.77□□□□□ -1.17
SMAD1-216ENST00000515527 OR10G7Q8NGN6 311 aa7.77□□□□□ -1.17
SMAD1-216ENST00000515527 PRR34Q9NV39 138 aa7.77□□□□□ -1.17
SMAD1-216ENST00000515527 FAM24AA6NFZ4 105 aa7.76□□□□□ -1.17
SMAD1-216ENST00000515527 ZNF506Q5JVG8 444 aa7.76□□□□□ -1.17
SMAD1-216ENST00000515527 C10orf113Q5VZT2 155 aa7.76□□□□□ -1.17
SMAD1-216ENST00000515527 AAMDCQ9H7C9 122 aa7.76□□□□□ -1.17
SMAD1-216ENST00000515527 TXNL4BQ9NX01 149 aaKnown RBP7.76□□□□□ -1.17
SMAD1-216ENST00000515527 WRBO00258 174 aa7.75□□□□□ -1.17
SMAD1-216ENST00000515527 GOSR2O14653 212 aa7.75□□□□□ -1.17
SMAD1-216ENST00000515527 CAV2P51636 162 aa7.75□□□□□ -1.17
SMAD1-216ENST00000515527 SLC38A11Q08AI6 406 aa7.75□□□□□ -1.17
SMAD1-216ENST00000515527 SPANXN5Q5MJ07 72 aa7.75□□□□□ -1.17
SMAD1-216ENST00000515527 PRSS48Q7RTY5 328 aa7.75□□□□□ -1.17
SMAD1-216ENST00000515527 KCNS1Q96KK3 526 aa7.75□□□□□ -1.17
SMAD1-216ENST00000515527 PRR13Q9NZ81 148 aa7.75□□□□□ -1.17
SMAD1-216ENST00000515527 C14orf166Q9Y224 244 aaKnown RBP7.75□□□□□ -1.17
SMAD1-216ENST00000515527 PGPEP1LA6NFU8 196 aa7.74□□□□□ -1.17
SMAD1-216ENST00000515527 M0R2T5 61 aa7.74□□□□□ -1.17
SMAD1-216ENST00000515527 NDUFB4O95168 129 aa7.74□□□□□ -1.17
SMAD1-216ENST00000515527 SDC2P34741 201 aa7.74□□□□□ -1.17
SMAD1-216ENST00000515527 RAB5CP51148 216 aa7.74□□□□□ -1.17
SMAD1-216ENST00000515527 SCGB2B2Q4G0G5 96 aa7.74□□□□□ -1.17
SMAD1-216ENST00000515527 RNASE10Q5GAN6 216 aaKnown RBP7.74□□□□□ -1.17
SMAD1-216ENST00000515527 ZFP2Q6ZN57 461 aa7.74□□□□□ -1.17
SMAD1-216ENST00000515527 CIB3Q96Q77 187 aaPredicted RBP7.74□□□□□ -1.17
SMAD1-216ENST00000515527 SOSTQ9BQB4 213 aa7.74□□□□□ -1.17
SMAD1-216ENST00000515527 CHCHD5Q9BSY4 110 aa7.74□□□□□ -1.17
SMAD1-216ENST00000515527 PARLQ9H300 379 aa7.74□□□□□ -1.17
SMAD1-216ENST00000515527 H3BP45 60 aa7.73□□□□□ -1.17
SMAD1-216ENST00000515527 PKIAP61925 76 aa7.73□□□□□ -1.17
SMAD1-216ENST00000515527 EIF5AP63241 154 aaKnown RBP7.73□□□□□ -1.17
SMAD1-216ENST00000515527 HIGD2BQ4VC39 106 aa7.73□□□□□ -1.17
SMAD1-216ENST00000515527 PRR27Q6MZM9 219 aa7.73□□□□□ -1.17
SMAD1-216ENST00000515527 PKIGQ9Y2B9 76 aa7.73□□□□□ -1.17
SMAD1-216ENST00000515527 CARHSP1Q9Y2V2 147 aaKnown RBP7.73□□□□□ -1.17
SMAD1-216ENST00000515527 TPRKBQ9Y3C4 175 aa7.73□□□□□ -1.17
SMAD1-216ENST00000515527 TRBV6-8A0A0A6YYG3 113 aa7.72□□□□□ -1.17
SMAD1-216ENST00000515527 RRAS2P62070 204 aaPredicted RBP7.72□□□□□ -1.17
SMAD1-216ENST00000515527 LYZL2Q7Z4W2 148 aa7.72□□□□□ -1.17
SMAD1-216ENST00000515527 TERB2Q8NHR7 220 aa7.72□□□□□ -1.17
SMAD1-216ENST00000515527 ASB13Q8WXK3 278 aa7.72□□□□□ -1.17
SMAD1-216ENST00000515527 K7EPK0 472 aa7.71□□□□□ -1.18
SMAD1-216ENST00000515527 MED6O75586 246 aa7.71□□□□□ -1.18
SMAD1-216ENST00000515527 AMTP48728 403 aa7.71□□□□□ -1.18
SMAD1-216ENST00000515527 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.18
SMAD1-216ENST00000515527 UBE2NLQ5JXB2 153 aa7.71□□□□□ -1.18
SMAD1-216ENST00000515527 CFAP161Q6P656 301 aa7.71□□□□□ -1.18
SMAD1-216ENST00000515527 C15orf56Q8N910 161 aa7.71□□□□□ -1.18
SMAD1-216ENST00000515527 RTBDNQ9BSG5 229 aaPredicted RBP7.71□□□□□ -1.18
SMAD1-216ENST00000515527 STRAPQ9Y3F4 350 aaKnown RBP7.71□□□□□ -1.18
SMAD1-216ENST00000515527 A0A0B4J2A0 478 aa7.7□□□□□ -1.18
SMAD1-216ENST00000515527 GZMBP10144 247 aa7.7□□□□□ -1.18
SMAD1-216ENST00000515527 RBX1P62877 108 aa7.7□□□□□ -1.18
SMAD1-216ENST00000515527 REG3AQ06141 175 aa7.7□□□□□ -1.18
SMAD1-216ENST00000515527 PDE6HQ13956 83 aa7.7□□□□□ -1.18
SMAD1-216ENST00000515527 LINC00173Q6ZV60 143 aa7.7□□□□□ -1.18
SMAD1-216ENST00000515527 LINC00337Q8N6G1 96 aa7.7□□□□□ -1.18
SMAD1-216ENST00000515527 PPDPFQ9H3Y8 114 aa7.7□□□□□ -1.18
SMAD1-216ENST00000515527 GPN1Q9HCN4 374 aaPredicted RBP7.7□□□□□ -1.18
SMAD1-216ENST00000515527 NPVFQ9HCQ7 196 aa7.7□□□□□ -1.18
SMAD1-216ENST00000515527 S100A14Q9HCY8 104 aa7.7□□□□□ -1.18
SMAD1-216ENST00000515527 SHPKQ9UHJ6 478 aa7.7□□□□□ -1.18
SMAD1-216ENST00000515527 TRAV21A0A0B4J279 112 aa7.69□□□□□ -1.18
SMAD1-216ENST00000515527 A8MWV9 139 aa7.69□□□□□ -1.18
SMAD1-216ENST00000515527 PTTG1O95997 202 aa7.69□□□□□ -1.18
SMAD1-216ENST00000515527 CD3DP04234 171 aa7.69□□□□□ -1.18
SMAD1-216ENST00000515527 TBPP20226 339 aa7.69□□□□□ -1.18
SMAD1-216ENST00000515527 IZUMO2Q6UXV1 221 aa7.69□□□□□ -1.18
SMAD1-216ENST00000515527 SNX29P2Q8IUI4 249 aa7.69□□□□□ -1.18
SMAD1-216ENST00000515527 NAA50Q9GZZ1 169 aaKnown RBP7.69□□□□□ -1.18
SMAD1-216ENST00000515527 TRAV8-4A0A0B4J246 113 aa7.68□□□□□ -1.18
SMAD1-216ENST00000515527 SYNGR2O43760 224 aa7.68□□□□□ -1.18
SMAD1-216ENST00000515527 P01737 135 aa7.68□□□□□ -1.18
SMAD1-216ENST00000515527 RAB2AP61019 212 aa7.68□□□□□ -1.18
SMAD1-216ENST00000515527 KRTAP19-2Q3LHN2 52 aa7.68□□□□□ -1.18
SMAD1-216ENST00000515527 LGALSLQ3ZCW2 172 aaPredicted RBP7.68□□□□□ -1.18
SMAD1-216ENST00000515527 SAMD12Q8N8I0 201 aa7.68□□□□□ -1.18
SMAD1-216ENST00000515527 KCNIP3Q9Y2W7 256 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms