RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 FAM74A7A6NL05 159 aa7.95□□□□□ -1.14
VCAN-212ENST00000515397 ARL6IP6Q8N6S5 226 aa7.95□□□□□ -1.14
VCAN-212ENST00000515397 CYB561D1Q8N8Q1 229 aa7.95□□□□□ -1.14
VCAN-212ENST00000515397 NDFIP1Q9BT67 221 aa7.95□□□□□ -1.14
VCAN-212ENST00000515397 ZNF471Q9BX82 626 aaPredicted RBP7.95□□□□□ -1.14
VCAN-212ENST00000515397 MAP1LC3BQ9GZQ8 125 aa7.95□□□□□ -1.14
VCAN-212ENST00000515397 Q9H8V8 135 aa7.95□□□□□ -1.14
VCAN-212ENST00000515397 HHLA3Q9XRX5 114 aa7.95□□□□□ -1.14
VCAN-212ENST00000515397 TRGV4A0A0C4DH28 118 aa7.94□□□□□ -1.14
VCAN-212ENST00000515397 NBDYA0A0U1RRE5 68 aa7.94□□□□□ -1.14
VCAN-212ENST00000515397 A0A1W2PRE2 83 aa7.94□□□□□ -1.14
VCAN-212ENST00000515397 C9JCJ5 164 aa7.94□□□□□ -1.14
VCAN-212ENST00000515397 K7EQM0 130 aa7.94□□□□□ -1.14
VCAN-212ENST00000515397 C1orf134Q5TEV5 83 aa7.94□□□□□ -1.14
VCAN-212ENST00000515397 FAM213BQ8TBF2 198 aa7.94□□□□□ -1.14
VCAN-212ENST00000515397 C18orf15Q96N68 181 aa7.94□□□□□ -1.14
VCAN-212ENST00000515397 SDF2L1Q9HCN8 221 aa7.94□□□□□ -1.14
VCAN-212ENST00000515397 IGHV3-73A0A0B4J1V6 119 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 A0A1B0GVY2 172 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 SERTM2A0A1B0GWG4 89 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 HMSDA8MTL9 139 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 PEX7O00628 323 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 CRYBA4P53673 196 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 TDRG1Q3Y452 100 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 SMUG1Q53HV7 270 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 CST9LP1Q5W188 147 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 LINC00336Q6ZUF6 198 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 TMUB2Q71RG4 321 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 SFT2D1Q8WV19 159 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 RASL10AQ92737 203 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 SPXQ9BT56 116 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 KRTAP1-5Q9BYS1 174 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 PRO0255Q9UI72 69 aa7.93□□□□□ -1.14
VCAN-212ENST00000515397 A0A0D9SG52 128 aa7.92□□□□□ -1.14
VCAN-212ENST00000515397 LOC100131303A0A0U1RQF7 123 aa7.92□□□□□ -1.14
VCAN-212ENST00000515397 KANTRA0A1W2PQU2 76 aa7.92□□□□□ -1.14
VCAN-212ENST00000515397 H3BNG1 76 aa7.92□□□□□ -1.14
VCAN-212ENST00000515397 M0R2P5 195 aa7.92□□□□□ -1.14
VCAN-212ENST00000515397 BCL2L11O43521 198 aa7.92□□□□□ -1.14
VCAN-212ENST00000515397 PAGE4O60829 102 aa7.92□□□□□ -1.14
VCAN-212ENST00000515397 FAM3BP58499 235 aaPredicted RBP7.92□□□□□ -1.14
VCAN-212ENST00000515397 ZNF345Q14585 488 aa7.92□□□□□ -1.14
VCAN-212ENST00000515397 DPPA3Q6W0C5 159 aa7.92□□□□□ -1.14
VCAN-212ENST00000515397 OR4C5Q8NGB2 326 aa7.92□□□□□ -1.14
VCAN-212ENST00000515397 ARL2-SNX15V9GYD0 113 aa7.92□□□□□ -1.14
VCAN-212ENST00000515397 hCG_2014768A0A024R1R8 64 aa7.91□□□□□ -1.14
VCAN-212ENST00000515397 IGKV3D-20A0A0C4DH25 116 aa7.91□□□□□ -1.14
VCAN-212ENST00000515397 PGPEP1LA6NFU8 196 aa7.91□□□□□ -1.14
VCAN-212ENST00000515397 PFDN1O60925 122 aa7.91□□□□□ -1.14
VCAN-212ENST00000515397 PFN1P07737 140 aaKnown RBP7.91□□□□□ -1.14
VCAN-212ENST00000515397 SEC11BP0C7V7 166 aa7.91□□□□□ -1.14
VCAN-212ENST00000515397 GYPEP15421 78 aa7.91□□□□□ -1.14
VCAN-212ENST00000515397 CRIP1P50238 77 aa7.91□□□□□ -1.14
VCAN-212ENST00000515397 KCNS1Q96KK3 526 aa7.91□□□□□ -1.14
VCAN-212ENST00000515397 ICOSQ9Y6W8 199 aa7.91□□□□□ -1.14
VCAN-212ENST00000515397 CCL20P78556 96 aa7.9□□□□□ -1.14
VCAN-212ENST00000515397 TNP2Q05952 138 aa7.9□□□□□ -1.14
VCAN-212ENST00000515397 LGALSLQ3ZCW2 172 aaPredicted RBP7.9□□□□□ -1.14
VCAN-212ENST00000515397 ZNF876PQ49A33 203 aa7.9□□□□□ -1.14
VCAN-212ENST00000515397 ZFP69Q49AA0 526 aa7.9□□□□□ -1.14
VCAN-212ENST00000515397 SAPCD1Q5SSQ6 148 aa7.9□□□□□ -1.14
VCAN-212ENST00000515397 Q86TA4 180 aa7.9□□□□□ -1.14
VCAN-212ENST00000515397 NHLRC2Q8NBF2 726 aa7.9□□□□□ -1.14
VCAN-212ENST00000515397 STOML3Q8TAV4 291 aa7.9□□□□□ -1.14
VCAN-212ENST00000515397 ZC2HC1AQ96GY0 325 aa7.9□□□□□ -1.14
VCAN-212ENST00000515397 MRPS16Q9Y3D3 137 aaKnown RBP7.9□□□□□ -1.14
VCAN-212ENST00000515397 PKD1P98161 4303 aa7.9□□□□□ -1.15
VCAN-212ENST00000515397 TRAV4A0A0B4J268 109 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 GRIFINA4D1Z8 144 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 K7EQD1 137 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 M0R036 132 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 ORM1P02763 201 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 RNASE3P12724 160 aaKnown RBP7.89□□□□□ -1.15
VCAN-212ENST00000515397 PPT1P50897 306 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 SLAQ13239 276 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 MRPL23Q16540 153 aaKnown RBP7.89□□□□□ -1.15
VCAN-212ENST00000515397 SOHLH1Q5JUK2 328 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 LYPD5Q6UWN5 251 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 C6orf223Q8N319 242 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 MBD3L1Q8WWY6 194 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 HIST1H2BAQ96A08 127 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 TNFRSF18Q9Y5U5 241 aa7.89□□□□□ -1.15
VCAN-212ENST00000515397 TMSB15BA0A087X1C1 80 aa7.88□□□□□ -1.15
VCAN-212ENST00000515397 FABP5P3A8MUU1 101 aa7.88□□□□□ -1.15
VCAN-212ENST00000515397 SH2D1AO60880 128 aa7.88□□□□□ -1.15
VCAN-212ENST00000515397 NXPH4O95158 308 aa7.88□□□□□ -1.15
VCAN-212ENST00000515397 H2AFB1P0C5Y9 115 aa7.88□□□□□ -1.15
VCAN-212ENST00000515397 ZNF506Q5JVG8 444 aa7.88□□□□□ -1.15
VCAN-212ENST00000515397 CFAP126Q5VTH2 177 aa7.88□□□□□ -1.15
VCAN-212ENST00000515397 Q6ZNX1 250 aa7.88□□□□□ -1.15
VCAN-212ENST00000515397 C9orf85Q96MD7 179 aa7.88□□□□□ -1.15
VCAN-212ENST00000515397 NKX6-2Q9C056 277 aaPredicted RBP7.88□□□□□ -1.15
VCAN-212ENST00000515397 JPT2Q9H910 190 aa7.88□□□□□ -1.15
VCAN-212ENST00000515397 SCO2A0A1W2PP80 73 aa7.87□□□□□ -1.15
VCAN-212ENST00000515397 B4DEV8 164 aa7.87□□□□□ -1.15
VCAN-212ENST00000515397 UMAD1C9J7I0 102 aa7.87□□□□□ -1.15
VCAN-212ENST00000515397 RS1O15537 224 aa7.87□□□□□ -1.15
VCAN-212ENST00000515397 TPT1P13693 172 aaKnown RBP7.87□□□□□ -1.15
VCAN-212ENST00000515397 S100A4P26447 101 aaKnown RBP7.87□□□□□ -1.15
VCAN-212ENST00000515397 UBE2G1P62253 170 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms