RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 TMEM263Q8WUH6 116 aaKnown RBP15.14■□□□□ 0.01
LSM6-207ENST00000515311 CBY3A6NI87 242 aa15.13■□□□□ 0.01
LSM6-207ENST00000515311 HTN1P15515 57 aa15.13■□□□□ 0.01
LSM6-207ENST00000515311 OR5I1Q13606 314 aa15.13■□□□□ 0.01
LSM6-207ENST00000515311 LINC01559Q495D7 138 aa15.13■□□□□ 0.01
LSM6-207ENST00000515311 RNASE8Q8TDE3 154 aaKnown RBP15.13■□□□□ 0.01
LSM6-207ENST00000515311 SDF2L1Q9HCN8 221 aa15.13■□□□□ 0.01
LSM6-207ENST00000515311 DNAH9Q9NYC9 4486 aa15.12■□□□□ 0.01
LSM6-207ENST00000515311 IGHV4-28A0A0C4DH34 117 aa15.12■□□□□ 0.01
LSM6-207ENST00000515311 ORM1P02763 201 aa15.12■□□□□ 0.01
LSM6-207ENST00000515311 RPL23P62829 140 aaKnown RBP15.12■□□□□ 0.01
LSM6-207ENST00000515311 DAZAP1Q96EP5 407 aaKnown RBP15.12■□□□□ 0.01
LSM6-207ENST00000515311 C16orf74Q96GX8 76 aa15.12■□□□□ 0.01
LSM6-207ENST00000515311 SEC11CQ9BY50 192 aa15.12■□□□□ 0.01
LSM6-207ENST00000515311 TRGV11A0A075B6L2 103 aa15.11■□□□□ 0.01
LSM6-207ENST00000515311 IGKV3D-20A0A0C4DH25 116 aa15.11■□□□□ 0.01
LSM6-207ENST00000515311 TMEM189A5PLL7 270 aa15.11■□□□□ 0.01
LSM6-207ENST00000515311 B4DEV8 164 aa15.11■□□□□ 0.01
LSM6-207ENST00000515311 KRBOX1C9JBD0 128 aa15.11■□□□□ 0.01
LSM6-207ENST00000515311 PRM2P04554 102 aa15.11■□□□□ 0.01
LSM6-207ENST00000515311 ADCYAP1P18509 176 aa15.11■□□□□ 0.01
LSM6-207ENST00000515311 AZU1P20160 251 aa15.11■□□□□ 0.01
LSM6-207ENST00000515311 FAM231DQ6ZW35 169 aa15.11■□□□□ 0.01
LSM6-207ENST00000515311 C11orf68Q9H3H3 251 aaKnown RBP15.11■□□□□ 0.01
LSM6-207ENST00000515311 F8W036 122 aa15.1■□□□□ 0.01
LSM6-207ENST00000515311 M0R036 132 aa15.1■□□□□ 0.01
LSM6-207ENST00000515311 P01737 135 aa15.1■□□□□ 0.01
LSM6-207ENST00000515311 PNRC1Q12796 327 aaPredicted RBP15.1■□□□□ 0.01
LSM6-207ENST00000515311 ADIRFQ15847 76 aa15.1■□□□□ 0.01
LSM6-207ENST00000515311 IBA57Q5T440 356 aaKnown RBP15.1■□□□□ 0.01
LSM6-207ENST00000515311 TP53TG3Q9ULZ0 132 aa15.1■□□□□ 0.01
LSM6-207ENST00000515311 TYMSP04818 313 aa15.09■□□□□ 0.01
LSM6-207ENST00000515311 C10orf91Q5T1B1 145 aa15.09■□□□□ 0.01
LSM6-207ENST00000515311 C11orf72Q8NBR9 251 aa15.09■□□□□ 0.01
LSM6-207ENST00000515311 NUDT10Q8NFP7 164 aa15.09■□□□□ 0.01
LSM6-207ENST00000515311 ISOC2Q96AB3 205 aa15.09■□□□□ 0.01
LSM6-207ENST00000515311 NUDT11Q96G61 164 aa15.09■□□□□ 0.01
LSM6-207ENST00000515311 PLAC8L1A1L4L8 177 aa15.08■□□□□ 0
LSM6-207ENST00000515311 CXCL1P09341 107 aa15.08■□□□□ 0
LSM6-207ENST00000515311 ZNF415Q09FC8 603 aa15.08■□□□□ 0
LSM6-207ENST00000515311 DNLZQ5SXM8 178 aa15.08■□□□□ 0
LSM6-207ENST00000515311 SLC7A5P1Q8MH63 180 aa15.08■□□□□ 0
LSM6-207ENST00000515311 RNASE7Q9H1E1 156 aaKnown RBP15.08■□□□□ 0
LSM6-207ENST00000515311 STAB2Q8WWQ8 2551 aa15.07■□□□□ 0
LSM6-207ENST00000515311 IGHV3-16A0A0C4DH30 117 aa15.07■□□□□ 0
LSM6-207ENST00000515311 GNRH2O43555 120 aa15.07■□□□□ 0
LSM6-207ENST00000515311 ERVFC1-1P60608 527 aa15.07■□□□□ 0
LSM6-207ENST00000515311 ZNF575Q86XF7 245 aa15.07■□□□□ 0
LSM6-207ENST00000515311 OSTCQ9NRP0 149 aa15.07■□□□□ 0
LSM6-207ENST00000515311 U3KQK5 164 aa15.07■□□□□ 0
LSM6-207ENST00000515311 HUWE1Q7Z6Z7 4374 aaKnown RBP15.06■□□□□ 0
LSM6-207ENST00000515311 TCL1AP56279 114 aa15.06■□□□□ 0
LSM6-207ENST00000515311 RPS20P60866 119 aaKnown RBP15.06■□□□□ 0
LSM6-207ENST00000515311 OR2D3Q8NGH3 330 aa15.06■□□□□ 0
LSM6-207ENST00000515311 IL17DQ8TAD2 202 aa15.06■□□□□ 0
LSM6-207ENST00000515311 SFRP2Q96HF1 295 aa15.06■□□□□ 0
LSM6-207ENST00000515311 RPP21Q9H633 154 aaKnown RBP15.06■□□□□ 0
LSM6-207ENST00000515311 GSN-AS1Q9NRJ2 163 aa15.06■□□□□ 0
LSM6-207ENST00000515311 MDFICQ9P1T7 246 aa15.06■□□□□ 0
LSM6-207ENST00000515311 CARHSP1Q9Y2V2 147 aaKnown RBP15.06■□□□□ 0
LSM6-207ENST00000515311 TMSB15BA0A087X1C1 80 aa15.05■□□□□ -0
LSM6-207ENST00000515311 XKRY2A2RUG3 117 aa15.05■□□□□ -0
LSM6-207ENST00000515311 SNURFLB1AK76 121 aa15.05■□□□□ -0
LSM6-207ENST00000515311 ASIPP42127 132 aa15.05■□□□□ -0
LSM6-207ENST00000515311 RPL19P84098 196 aaKnown RBP15.05■□□□□ -0
LSM6-207ENST00000515311 DAZ2Q13117 558 aaKnown RBP15.05■□□□□ -0
LSM6-207ENST00000515311 C15orf54Q8N8G6 183 aa15.05■□□□□ -0
LSM6-207ENST00000515311 A0A0J9YWU9 116 aa15.04■□□□□ -0
LSM6-207ENST00000515311 DEFB4AO15263 64 aa15.04■□□□□ -0
LSM6-207ENST00000515311 GATCO43716 136 aaKnown RBP15.04■□□□□ -0
LSM6-207ENST00000515311 CT83Q5H943 113 aa15.04■□□□□ -0
LSM6-207ENST00000515311 TIMM8BQ9Y5J9 83 aaPredicted RBP15.04■□□□□ -0
LSM6-207ENST00000515311 EMP1P54849 157 aa15.03■□□□□ -0
LSM6-207ENST00000515311 SPXQ9BT56 116 aa15.03■□□□□ -0
LSM6-207ENST00000515311 IL36BQ9NZH7 164 aa15.03■□□□□ -0
LSM6-207ENST00000515311 TEX48A0A1B0GUV7 120 aa15.02■□□□□ -0
LSM6-207ENST00000515311 GRIFINA4D1Z8 144 aa15.02■□□□□ -0
LSM6-207ENST00000515311 LYRM9A8MSI8 78 aa15.02■□□□□ -0
LSM6-207ENST00000515311 MED14OSP0DP75 135 aa15.02■□□□□ -0
LSM6-207ENST00000515311 RNASE3P12724 160 aaKnown RBP15.02■□□□□ -0
LSM6-207ENST00000515311 S100A4P26447 101 aaKnown RBP15.02■□□□□ -0
LSM6-207ENST00000515311 OR10G8Q8NGN5 311 aa15.02■□□□□ -0
LSM6-207ENST00000515311 C9orf85Q96MD7 179 aa15.02■□□□□ -0
LSM6-207ENST00000515311 TGP01266 2768 aa15.01□□□□□ -0.01
LSM6-207ENST00000515311 NOP10Q9NPE3 64 aaKnown RBP15.01□□□□□ -0.01
LSM6-207ENST00000515311 DKK2Q9UBU2 259 aa15.01□□□□□ -0.01
LSM6-207ENST00000515311 A8MWL6 223 aa15□□□□□ -0.01
LSM6-207ENST00000515311 H3BVH4 76 aa15□□□□□ -0.01
LSM6-207ENST00000515311 SPART-AS1P0CW21 52 aa15□□□□□ -0.01
LSM6-207ENST00000515311 LGALS9BQ3B8N2 356 aa15□□□□□ -0.01
LSM6-207ENST00000515311 SCRT2Q9NQ03 307 aa15□□□□□ -0.01
LSM6-207ENST00000515311 V9GYV3 84 aa15□□□□□ -0.01
LSM6-207ENST00000515311 PPP1R2P9O14990 202 aa14.99□□□□□ -0.01
LSM6-207ENST00000515311 SPINK4O60575 86 aa14.99□□□□□ -0.01
LSM6-207ENST00000515311 ARMS2P0C7Q2 107 aa14.99□□□□□ -0.01
LSM6-207ENST00000515311 FAM222AQ5U5X8 452 aa14.99□□□□□ -0.01
LSM6-207ENST00000515311 SSBP4Q9BWG4 385 aaPredicted RBP14.99□□□□□ -0.01
LSM6-207ENST00000515311 EDA2RQ9HAV5 297 aa14.99□□□□□ -0.01
LSM6-207ENST00000515311 M0R2P5 195 aa14.98□□□□□ -0.01
LSM6-207ENST00000515311 MT-ND4LP03901 98 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms