RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 CYB561D1Q8N8Q1 229 aa16.93■□□□□ 0.3
SNF8-213ENST00000514929 RASL10AQ92737 203 aa16.93■□□□□ 0.3
SNF8-213ENST00000514929 SDF2L1Q9HCN8 221 aa16.93■□□□□ 0.3
SNF8-213ENST00000514929 IGHV3-16A0A0C4DH30 117 aa16.92■□□□□ 0.3
SNF8-213ENST00000514929 A0A1W2PRE2 83 aa16.92■□□□□ 0.3
SNF8-213ENST00000514929 TYMSP04818 313 aa16.92■□□□□ 0.3
SNF8-213ENST00000514929 CRYBA4P53673 196 aa16.92■□□□□ 0.3
SNF8-213ENST00000514929 FLI1Q01543 452 aaPredicted RBP16.92■□□□□ 0.3
SNF8-213ENST00000514929 TTC32Q5I0X7 151 aa16.92■□□□□ 0.3
SNF8-213ENST00000514929 SMLR1H3BR10 107 aa16.91■□□□□ 0.3
SNF8-213ENST00000514929 SFTA3P0C7M3 94 aa16.91■□□□□ 0.3
SNF8-213ENST00000514929 ZFP69Q49AA0 526 aa16.91■□□□□ 0.3
SNF8-213ENST00000514929 PRNTQ86SH4 94 aa16.91■□□□□ 0.3
SNF8-213ENST00000514929 ZNF479Q96JC4 524 aa16.91■□□□□ 0.3
SNF8-213ENST00000514929 M0R2P5 195 aa16.9■□□□□ 0.3
SNF8-213ENST00000514929 GCGP01275 180 aa16.9■□□□□ 0.3
SNF8-213ENST00000514929 TMEM75Q8N9X5 138 aa16.9■□□□□ 0.3
SNF8-213ENST00000514929 CYTL1Q9NRR1 136 aa16.9■□□□□ 0.3
SNF8-213ENST00000514929 FBLL1A6NHQ2 334 aaKnown RBP16.89■□□□□ 0.29
SNF8-213ENST00000514929 IFNA7P01567 189 aa16.89■□□□□ 0.29
SNF8-213ENST00000514929 IGLV2-11P01706 119 aa16.89■□□□□ 0.29
SNF8-213ENST00000514929 ZNF80P51504 273 aaPredicted RBP16.89■□□□□ 0.29
SNF8-213ENST00000514929 FGF8P55075 233 aaPredicted RBP16.89■□□□□ 0.29
SNF8-213ENST00000514929 UBE2G2P60604 165 aa16.89■□□□□ 0.29
SNF8-213ENST00000514929 SMUG1Q53HV7 270 aa16.89■□□□□ 0.29
SNF8-213ENST00000514929 MRPL23Q16540 153 aaKnown RBP16.88■□□□□ 0.29
SNF8-213ENST00000514929 TRAV4A0A0B4J268 109 aa16.87■□□□□ 0.29
SNF8-213ENST00000514929 TNP2Q05952 138 aa16.87■□□□□ 0.29
SNF8-213ENST00000514929 SAPCD1Q5SSQ6 148 aa16.87■□□□□ 0.29
SNF8-213ENST00000514929 OR4C5Q8NGB2 326 aa16.87■□□□□ 0.29
SNF8-213ENST00000514929 MAP1LC3B2A6NCE7 125 aa16.86■□□□□ 0.29
SNF8-213ENST00000514929 PFN1P07737 140 aaKnown RBP16.86■□□□□ 0.29
SNF8-213ENST00000514929 PCNPQ8WW12 178 aaKnown RBP16.86■□□□□ 0.29
SNF8-213ENST00000514929 KRTAP1-5Q9BYS1 174 aa16.86■□□□□ 0.29
SNF8-213ENST00000514929 MAP1LC3BQ9GZQ8 125 aa16.86■□□□□ 0.29
SNF8-213ENST00000514929 C11orf21Q9P2W6 132 aa16.86■□□□□ 0.29
SNF8-213ENST00000514929 PKD1P98161 4303 aa16.86■□□□□ 0.29
SNF8-213ENST00000514929 PKHD1P08F94 4074 aa16.86■□□□□ 0.29
SNF8-213ENST00000514929 TRAV34A0A0B4J273 112 aa16.85■□□□□ 0.29
SNF8-213ENST00000514929 A0A1W2PPQ1 181 aa16.85■□□□□ 0.29
SNF8-213ENST00000514929 PPT1P50897 306 aa16.85■□□□□ 0.29
SNF8-213ENST00000514929 KCNRGQ8N5I3 272 aa16.85■□□□□ 0.29
SNF8-213ENST00000514929 LINC00479Q96M42 142 aa16.85■□□□□ 0.29
SNF8-213ENST00000514929 NKX6-2Q9C056 277 aaPredicted RBP16.85■□□□□ 0.29
SNF8-213ENST00000514929 FAM74A7A6NL05 159 aa16.84■□□□□ 0.29
SNF8-213ENST00000514929 ZNF345Q14585 488 aa16.84■□□□□ 0.29
SNF8-213ENST00000514929 NEGR1Q7Z3B1 354 aa16.84■□□□□ 0.29
SNF8-213ENST00000514929 C9JCJ5 164 aa16.83■□□□□ 0.28
SNF8-213ENST00000514929 PEX7O00628 323 aa16.83■□□□□ 0.28
SNF8-213ENST00000514929 SIVA1O15304 175 aa16.83■□□□□ 0.28
SNF8-213ENST00000514929 NXPH4O95158 308 aa16.83■□□□□ 0.28
SNF8-213ENST00000514929 ORM1P02763 201 aa16.83■□□□□ 0.28
SNF8-213ENST00000514929 SRIP30626 198 aa16.83■□□□□ 0.28
SNF8-213ENST00000514929 LYPD5Q6UWN5 251 aa16.83■□□□□ 0.28
SNF8-213ENST00000514929 K7EQD1 137 aa16.82■□□□□ 0.28
SNF8-213ENST00000514929 GYPEP15421 78 aa16.82■□□□□ 0.28
SNF8-213ENST00000514929 STOML3Q8TAV4 291 aa16.82■□□□□ 0.28
SNF8-213ENST00000514929 HIST1H2BAQ96A08 127 aa16.82■□□□□ 0.28
SNF8-213ENST00000514929 ARL2-SNX15V9GYD0 113 aa16.82■□□□□ 0.28
SNF8-213ENST00000514929 HMSDA8MTL9 139 aa16.81■□□□□ 0.28
SNF8-213ENST00000514929 ZNF876PQ49A33 203 aa16.81■□□□□ 0.28
SNF8-213ENST00000514929 OR11H4Q8NGC9 324 aa16.8■□□□□ 0.28
SNF8-213ENST00000514929 HERC2O95714 4834 aa16.8■□□□□ 0.28
SNF8-213ENST00000514929 A0A0D9SG52 128 aa16.79■□□□□ 0.28
SNF8-213ENST00000514929 MED14OSP0DP75 135 aa16.79■□□□□ 0.28
SNF8-213ENST00000514929 FHITP49789 147 aa16.79■□□□□ 0.28
SNF8-213ENST00000514929 Q86TA4 180 aa16.79■□□□□ 0.28
SNF8-213ENST00000514929 TXNDC17Q9BRA2 123 aa16.79■□□□□ 0.28
SNF8-213ENST00000514929 KANTRA0A1W2PQU2 76 aa16.78■□□□□ 0.28
SNF8-213ENST00000514929 ZNF575Q86XF7 245 aa16.78■□□□□ 0.28
SNF8-213ENST00000514929 C9orf85Q96MD7 179 aa16.78■□□□□ 0.28
SNF8-213ENST00000514929 ZNF471Q9BX82 626 aaPredicted RBP16.78■□□□□ 0.28
SNF8-213ENST00000514929 KIAA1109Q2LD37 5005 aa16.78■□□□□ 0.28
SNF8-213ENST00000514929 FABP5P3A8MUU1 101 aa16.77■□□□□ 0.28
SNF8-213ENST00000514929 SEC11BP0C7V7 166 aa16.77■□□□□ 0.28
SNF8-213ENST00000514929 BTF3P20290 206 aaKnown RBP16.77■□□□□ 0.28
SNF8-213ENST00000514929 CST9LP1Q5W188 147 aa16.77■□□□□ 0.28
SNF8-213ENST00000514929 UMAD1C9J7I0 102 aa16.76■□□□□ 0.27
SNF8-213ENST00000514929 BCL2L11O43521 198 aa16.76■□□□□ 0.27
SNF8-213ENST00000514929 RNASE3P12724 160 aaKnown RBP16.76■□□□□ 0.27
SNF8-213ENST00000514929 GATA1P15976 413 aaPredicted RBP16.76■□□□□ 0.27
SNF8-213ENST00000514929 UBE2G1P62253 170 aa16.76■□□□□ 0.27
SNF8-213ENST00000514929 FAM213BQ8TBF2 198 aa16.76■□□□□ 0.27
SNF8-213ENST00000514929 LOC100131303A0A0U1RQF7 123 aa16.75■□□□□ 0.27
SNF8-213ENST00000514929 RS1O15537 224 aa16.75■□□□□ 0.27
SNF8-213ENST00000514929 S100A4P26447 101 aaKnown RBP16.75■□□□□ 0.27
SNF8-213ENST00000514929 CFAP126Q5VTH2 177 aa16.75■□□□□ 0.27
SNF8-213ENST00000514929 FMC1Q96HJ9 113 aa16.75■□□□□ 0.27
SNF8-213ENST00000514929 DNAH11Q96DT5 4516 aa16.75■□□□□ 0.27
SNF8-213ENST00000514929 IGKV3D-20A0A0C4DH25 116 aa16.74■□□□□ 0.27
SNF8-213ENST00000514929 PGPEP1LA6NFU8 196 aa16.74■□□□□ 0.27
SNF8-213ENST00000514929 CIDEAO60543 219 aa16.74■□□□□ 0.27
SNF8-213ENST00000514929 LINC00315P59091 139 aa16.74■□□□□ 0.27
SNF8-213ENST00000514929 ZNF506Q5JVG8 444 aa16.74■□□□□ 0.27
SNF8-213ENST00000514929 DPPA3Q6W0C5 159 aa16.74■□□□□ 0.27
SNF8-213ENST00000514929 NHLRC2Q8NBF2 726 aa16.74■□□□□ 0.27
SNF8-213ENST00000514929 SFT2D1Q8WV19 159 aa16.74■□□□□ 0.27
SNF8-213ENST00000514929 PTH2Q96A98 100 aa16.74■□□□□ 0.27
SNF8-213ENST00000514929 TCEAL7Q9BRU2 100 aa16.74■□□□□ 0.27
SNF8-213ENST00000514929 ZFP30Q9Y2G7 519 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms