RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ADORA2A-AS1P86434 159 aa10.35□□□□□ -0.75
TCOF1-213ENST00000514442 A0A087WX48 190 aa10.35□□□□□ -0.75
TCOF1-213ENST00000514442 P0C879 139 aa10.35□□□□□ -0.75
TCOF1-213ENST00000514442 GATA3P23771 443 aa10.35□□□□□ -0.75
TCOF1-213ENST00000514442 LHBP01229 141 aa10.35□□□□□ -0.75
TCOF1-213ENST00000514442 RNASE1P07998 156 aaKnown RBP10.35□□□□□ -0.75
TCOF1-213ENST00000514442 TMEM14CQ9P0S9 112 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 NUP210LQ5VU65 1888 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 TRBV19A0A075B6N1 114 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 IGHV3-53P01767 116 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 SPG11Q96JI7 2443 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 J3QKU1 62 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 MT-ATP8P03928 68 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 HLA-DRB4P13762 266 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 C2orf91Q6ZV80 131 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 PRADC1Q9BSG0 188 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 PRO1854Q9UHT4 67 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 HLA-DRB4X5D2U9 266 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 F8VRH5 84 aa10.34□□□□□ -0.75
TCOF1-213ENST00000514442 C14orf178Q8N769 122 aaPredicted RBP10.34□□□□□ -0.75
TCOF1-213ENST00000514442 HOXB4P17483 251 aaPredicted RBP10.33□□□□□ -0.76
TCOF1-213ENST00000514442 NRGNQ92686 78 aa10.33□□□□□ -0.76
TCOF1-213ENST00000514442 LINC00477Q96M19 166 aa10.33□□□□□ -0.76
TCOF1-213ENST00000514442 FAM167A-AS1Q96KT0 104 aa10.33□□□□□ -0.76
TCOF1-213ENST00000514442 TMEM126AQ9H061 195 aa10.33□□□□□ -0.76
TCOF1-213ENST00000514442 KMT2EQ8IZD2 1858 aa10.33□□□□□ -0.76
TCOF1-213ENST00000514442 PDE6HQ13956 83 aa10.33□□□□□ -0.76
TCOF1-213ENST00000514442 MORN5Q5VZ52 161 aa10.33□□□□□ -0.76
TCOF1-213ENST00000514442 TTTY13Q9BZ97 58 aa10.33□□□□□ -0.76
TCOF1-213ENST00000514442 HLA-DMBP28068 263 aa10.32□□□□□ -0.76
TCOF1-213ENST00000514442 DEFB131AP59861 70 aa10.32□□□□□ -0.76
TCOF1-213ENST00000514442 POU2AF1Q16633 256 aa10.32□□□□□ -0.76
TCOF1-213ENST00000514442 MSMPQ1L6U9 139 aa10.32□□□□□ -0.76
TCOF1-213ENST00000514442 NTN5Q8WTR8 489 aaPredicted RBP10.32□□□□□ -0.76
TCOF1-213ENST00000514442 TRGV1A0A0A0MS02 117 aa10.32□□□□□ -0.76
TCOF1-213ENST00000514442 E9PLD3 99 aa10.32□□□□□ -0.76
TCOF1-213ENST00000514442 PLEKHB2Q96CS7 222 aa10.32□□□□□ -0.76
TCOF1-213ENST00000514442 ARHGAP21Q5T5U3 1957 aa10.32□□□□□ -0.76
TCOF1-213ENST00000514442 IGHV3-64A0A075B6Q5 118 aa10.32□□□□□ -0.76
TCOF1-213ENST00000514442 CD28P10747 220 aa10.32□□□□□ -0.76
TCOF1-213ENST00000514442 A0A087WWL8 130 aa10.31□□□□□ -0.76
TCOF1-213ENST00000514442 FGF6P10767 208 aa10.31□□□□□ -0.76
TCOF1-213ENST00000514442 Q8NA96 180 aa10.31□□□□□ -0.76
TCOF1-213ENST00000514442 MBD6Q96DN6 1003 aa10.31□□□□□ -0.76
TCOF1-213ENST00000514442 OTOGLQ3ZCN5 2332 aa10.31□□□□□ -0.76
TCOF1-213ENST00000514442 ACACBO00763 2458 aa10.31□□□□□ -0.76
TCOF1-213ENST00000514442 ZNF503Q96F45 646 aa10.31□□□□□ -0.76
TCOF1-213ENST00000514442 IGHV4-61A0A0C4DH41 118 aa10.31□□□□□ -0.76
TCOF1-213ENST00000514442 RITA1Q96K30 269 aa10.3□□□□□ -0.76
TCOF1-213ENST00000514442 ARFGEF3Q5TH69 2177 aa10.3□□□□□ -0.76
TCOF1-213ENST00000514442 SPANXCQ9NY87 97 aa10.3□□□□□ -0.76
TCOF1-213ENST00000514442 PLCE1Q9P212 2302 aa10.3□□□□□ -0.76
TCOF1-213ENST00000514442 DPH3P1Q9H4G8 78 aa10.3□□□□□ -0.76
TCOF1-213ENST00000514442 TRBV7-9A0A0J9YWB2 115 aa10.3□□□□□ -0.76
TCOF1-213ENST00000514442 PMVKQ15126 192 aa10.3□□□□□ -0.76
TCOF1-213ENST00000514442 ZNF876PQ49A33 203 aa10.3□□□□□ -0.76
TCOF1-213ENST00000514442 ANKRD29Q8N6D5 301 aa10.29□□□□□ -0.76
TCOF1-213ENST00000514442 DPH3Q96FX2 82 aa10.29□□□□□ -0.76
TCOF1-213ENST00000514442 TRAV8-3A0A0A6YYJ7 113 aa10.29□□□□□ -0.76
TCOF1-213ENST00000514442 PCNX3Q9H6A9 2034 aa10.29□□□□□ -0.76
TCOF1-213ENST00000514442 IGHV4-30-2A0A087WSY4 118 aa10.29□□□□□ -0.76
TCOF1-213ENST00000514442 CHCHD5Q9BSY4 110 aa10.29□□□□□ -0.76
TCOF1-213ENST00000514442 NCOA6Q14686 2063 aaPredicted RBP10.29□□□□□ -0.76
TCOF1-213ENST00000514442 C19orf71A6NCJ1 209 aa10.28□□□□□ -0.76
TCOF1-213ENST00000514442 H3BRN7 92 aa10.28□□□□□ -0.76
TCOF1-213ENST00000514442 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
TCOF1-213ENST00000514442 C2orf66Q6UXQ4 117 aa10.28□□□□□ -0.76
TCOF1-213ENST00000514442 MUC22E2RYF6 1773 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-213ENST00000514442 IGHV4-59P01825 116 aa10.28□□□□□ -0.76
TCOF1-213ENST00000514442 PATE2Q6UY27 113 aa10.28□□□□□ -0.76
TCOF1-213ENST00000514442 DTX2Q86UW9 622 aa10.28□□□□□ -0.76
TCOF1-213ENST00000514442 DEFB112Q30KQ8 113 aa10.28□□□□□ -0.76
TCOF1-213ENST00000514442 A0A0U1RRA0 63 aa10.28□□□□□ -0.76
TCOF1-213ENST00000514442 ZNF415Q09FC8 603 aa10.28□□□□□ -0.76
TCOF1-213ENST00000514442 GAGE2AQ6NT46 116 aa10.28□□□□□ -0.76
TCOF1-213ENST00000514442 PRR25Q96S07 402 aa10.28□□□□□ -0.76
TCOF1-213ENST00000514442 KLK9Q9UKQ9 250 aa10.27□□□□□ -0.76
TCOF1-213ENST00000514442 LINC01619G3V211 115 aa10.27□□□□□ -0.77
TCOF1-213ENST00000514442 KNCNA6PVL3 124 aa10.27□□□□□ -0.77
TCOF1-213ENST00000514442 IGHV4-38-2P0DP08 117 aa10.27□□□□□ -0.77
TCOF1-213ENST00000514442 ODF1Q14990 250 aa10.27□□□□□ -0.77
TCOF1-213ENST00000514442 TM2D2Q9BX73 214 aa10.27□□□□□ -0.77
TCOF1-213ENST00000514442 XCL2Q9UBD3 114 aa10.27□□□□□ -0.77
TCOF1-213ENST00000514442 INSP01308 110 aa10.27□□□□□ -0.77
TCOF1-213ENST00000514442 C17orf77Q96MU5 243 aa10.27□□□□□ -0.77
TCOF1-213ENST00000514442 WDR87Q6ZQQ6 2873 aa10.27□□□□□ -0.77
TCOF1-213ENST00000514442 ANKHD1Q8IWZ3 2542 aaKnown RBP10.26□□□□□ -0.77
TCOF1-213ENST00000514442 IGKV1OR2-108A0A075B7D4 117 aa10.26□□□□□ -0.77
TCOF1-213ENST00000514442 GP9P14770 177 aa10.26□□□□□ -0.77
TCOF1-213ENST00000514442 NDUFV3P56181 108 aaKnown RBP10.26□□□□□ -0.77
TCOF1-213ENST00000514442 LGALS1P09382 135 aaKnown RBP10.26□□□□□ -0.77
TCOF1-213ENST00000514442 TNRC6AQ8NDV7 1962 aaKnown RBP10.26□□□□□ -0.77
TCOF1-213ENST00000514442 PTPRSQ13332 1948 aa10.26□□□□□ -0.77
TCOF1-213ENST00000514442 TRAV26-2A0A0B4J265 109 aa10.26□□□□□ -0.77
TCOF1-213ENST00000514442 NOTCH2Q04721 2471 aa10.26□□□□□ -0.77
TCOF1-213ENST00000514442 MORN3Q6PF18 240 aaPredicted RBP10.26□□□□□ -0.77
TCOF1-213ENST00000514442 PTH2Q96A98 100 aa10.26□□□□□ -0.77
TCOF1-213ENST00000514442 PRR14LQ5THK1 2151 aa10.25□□□□□ -0.77
TCOF1-213ENST00000514442 TRAV12-2A0A075B6T6 113 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms