RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 DUX3Q96PT4 197 aa7.36□□□□□ -1.23
TPM3-221ENST00000513769 PHOX2AO14813 284 aa7.35□□□□□ -1.23
TPM3-221ENST00000513769 AMBPP02760 352 aa7.35□□□□□ -1.23
TPM3-221ENST00000513769 S100A6P06703 90 aa7.35□□□□□ -1.23
TPM3-221ENST00000513769 ZNF688P0C7X2 276 aa7.35□□□□□ -1.23
TPM3-221ENST00000513769 CDKN1BP46527 198 aa7.35□□□□□ -1.23
TPM3-221ENST00000513769 ZNF80P51504 273 aaPredicted RBP7.35□□□□□ -1.23
TPM3-221ENST00000513769 C21orf62-AS1Q17RA5 79 aa7.35□□□□□ -1.23
TPM3-221ENST00000513769 NSUN5P1Q3KNT7 163 aa7.35□□□□□ -1.23
TPM3-221ENST00000513769 ACTL10Q5JWF8 245 aa7.35□□□□□ -1.23
TPM3-221ENST00000513769 C20orf144Q9BQM9 153 aa7.35□□□□□ -1.23
TPM3-221ENST00000513769 CNFNQ9BYD5 112 aa7.35□□□□□ -1.23
TPM3-221ENST00000513769 GPR61Q9BZJ8 451 aa7.35□□□□□ -1.23
TPM3-221ENST00000513769 CUBNO60494 3623 aa7.35□□□□□ -1.23
TPM3-221ENST00000513769 IGHV4-4A0A075B6R2 117 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 A0A1B0GXF2 115 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 KRTAP9-7A8MTY7 169 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 H3BMM0 161 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 OR5AL1P0C617 328 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 HLA-DRB4P13762 266 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 TFPI2P48307 235 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 LINC00310P59036 64 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 NUTF2P61970 127 aaKnown RBP7.34□□□□□ -1.23
TPM3-221ENST00000513769 HBBP68871 147 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 BEAN1Q3B7T3 259 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 TDRG1Q3Y452 100 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 ZNF575Q86XF7 245 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.34□□□□□ -1.23
TPM3-221ENST00000513769 LINC00482Q8N8I6 264 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 GATD1Q8NB37 220 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 SVIPQ8NHG7 77 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 Q8TAT8 98 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 ZNF747Q9BV97 191 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 HLA-DRB4X5D2U9 266 aa7.34□□□□□ -1.23
TPM3-221ENST00000513769 IGKV3D-20A0A0C4DH25 116 aa7.33□□□□□ -1.24
TPM3-221ENST00000513769 SAP30O75446 220 aa7.33□□□□□ -1.24
TPM3-221ENST00000513769 ZNF324O75467 553 aaPredicted RBP7.33□□□□□ -1.24
TPM3-221ENST00000513769 CA1P00915 261 aaPredicted RBP7.33□□□□□ -1.24
TPM3-221ENST00000513769 TRGC1P0CF51 173 aa7.33□□□□□ -1.24
TPM3-221ENST00000513769 IGLC6P0CF74 106 aa7.33□□□□□ -1.24
TPM3-221ENST00000513769 DEFB131AP59861 70 aa7.33□□□□□ -1.24
TPM3-221ENST00000513769 FABP9Q0Z7S8 132 aa7.33□□□□□ -1.24
TPM3-221ENST00000513769 C9orf66Q5T8R8 295 aa7.33□□□□□ -1.24
TPM3-221ENST00000513769 ZNF493Q6ZR52 646 aa7.33□□□□□ -1.24
TPM3-221ENST00000513769 TMEM136Q6ZRR5 245 aa7.33□□□□□ -1.24
TPM3-221ENST00000513769 C5orf52A6NGY3 159 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 SNURFLB1AK76 121 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 OR11H12B2RN74 326 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 F6UB75 175 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 HIST1H2BKO60814 126 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 HIST1H2BJP06899 126 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 ZNF705DP0CH99 300 aaPredicted RBP7.32□□□□□ -1.24
TPM3-221ENST00000513769 ZNF705BP0CI00 300 aaPredicted RBP7.32□□□□□ -1.24
TPM3-221ENST00000513769 HIST1H2BOP23527 126 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 HIST1H2BBP33778 126 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 RNASE4P34096 147 aaKnown RBP7.32□□□□□ -1.24
TPM3-221ENST00000513769 HIST1H2BDP58876 126 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 HIST1H2BCP62807 126 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 CACNG7P62955 275 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 Q0VG73 95 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 HIST2H2BEQ16778 126 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 COA6Q5JTJ3 125 aaKnown RBP7.32□□□□□ -1.24
TPM3-221ENST00000513769 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.32□□□□□ -1.24
TPM3-221ENST00000513769 LYZL1Q6UWQ5 148 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 FAM159AQ6UWV7 190 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 FER1L6-AS1Q8NA97 138 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 FRZBQ92765 325 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 HIST1H2BHQ93079 126 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 PGLYRP4Q96LB8 373 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 HIST1H2BNQ99877 126 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 HIST1H2BMQ99879 126 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 TP53TG3Q9ULZ0 132 aa7.32□□□□□ -1.24
TPM3-221ENST00000513769 ANK3Q12955 4377 aaKnown RBP7.31□□□□□ -1.24
TPM3-221ENST00000513769 C7orf71A4D174 169 aa7.31□□□□□ -1.24
TPM3-221ENST00000513769 SNAI2O43623 268 aa7.31□□□□□ -1.24
TPM3-221ENST00000513769 APCSP02743 223 aa7.31□□□□□ -1.24
TPM3-221ENST00000513769 HOXA5P20719 270 aa7.31□□□□□ -1.24
TPM3-221ENST00000513769 CTRLP40313 264 aa7.31□□□□□ -1.24
TPM3-221ENST00000513769 TCL1AP56279 114 aa7.31□□□□□ -1.24
TPM3-221ENST00000513769 OR10J3Q5JRS4 329 aa7.31□□□□□ -1.24
TPM3-221ENST00000513769 GDF5OSQ5U4N7 250 aa7.31□□□□□ -1.24
TPM3-221ENST00000513769 AMTNQ6UX39 209 aa7.31□□□□□ -1.24
TPM3-221ENST00000513769 C12orf54Q6X4T0 127 aa7.31□□□□□ -1.24
TPM3-221ENST00000513769 LINC00467Q9BRT7 94 aa7.31□□□□□ -1.24
TPM3-221ENST00000513769 MAP6D1Q9H9H5 199 aa7.31□□□□□ -1.24
TPM3-221ENST00000513769 ZMAT5Q9UDW3 170 aaKnown RBP7.31□□□□□ -1.24
TPM3-221ENST00000513769 SPINK4O60575 86 aa7.3□□□□□ -1.24
TPM3-221ENST00000513769 NTF3P20783 257 aa7.3□□□□□ -1.24
TPM3-221ENST00000513769 RAB4BP61018 213 aa7.3□□□□□ -1.24
TPM3-221ENST00000513769 MRPL54Q6P161 138 aaKnown RBP7.3□□□□□ -1.24
TPM3-221ENST00000513769 TMEM191AQ9H0A3 160 aa7.3□□□□□ -1.24
TPM3-221ENST00000513769 LOC105371267A0A1B0GV96 52 aa7.29□□□□□ -1.24
TPM3-221ENST00000513769 PPBPP02775 128 aa7.29□□□□□ -1.24
TPM3-221ENST00000513769 GZMBP10144 247 aa7.29□□□□□ -1.24
TPM3-221ENST00000513769 CAMPP49913 170 aa7.29□□□□□ -1.24
TPM3-221ENST00000513769 NDUFA6P56556 154 aa7.29□□□□□ -1.24
TPM3-221ENST00000513769 PIK3CD-AS1Q5SR53 167 aa7.29□□□□□ -1.24
TPM3-221ENST00000513769 SMIM15Q7Z3B0 74 aa7.29□□□□□ -1.24
TPM3-221ENST00000513769 STHQ8IWL8 128 aa7.29□□□□□ -1.24
TPM3-221ENST00000513769 TMEM256Q8N2U0 113 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms