RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ZNF471Q9BX82 626 aaPredicted RBP6.75□□□□□ -1.33
RNF4-221ENST00000513643 RPH3ALQ9UNE2 315 aa6.75□□□□□ -1.33
RNF4-221ENST00000513643 NACAE9PAV3 2078 aa6.75□□□□□ -1.33
RNF4-221ENST00000513643 TRGV11A0A075B6L2 103 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 TRAV26-1A0A087WT03 109 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 TRGV1A0A0A0MS02 117 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 TRAV1-1A0A0B4J248 108 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 KANTRA0A1W2PQU2 76 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 F6UZH7 168 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 K7EQM0 130 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 PEX7O00628 323 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 PFN1P07737 140 aaKnown RBP6.74□□□□□ -1.33
RNF4-221ENST00000513643 CRIP1P50238 77 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 EIF5AP63241 154 aaKnown RBP6.74□□□□□ -1.33
RNF4-221ENST00000513643 ZNF415Q09FC8 603 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 FHL2Q14192 279 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 TMEM183BQ1AE95 376 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 SAPCD1Q5SSQ6 148 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 FAM159AQ6UWV7 190 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 TMEM183AQ8IXX5 376 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 ZNRF2Q8NHG8 242 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 PTH2Q96A98 100 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 HERC2O95714 4834 aa6.74□□□□□ -1.33
RNF4-221ENST00000513643 KIAA1109Q2LD37 5005 aa6.73□□□□□ -1.33
RNF4-221ENST00000513643 TRAV34A0A0B4J273 112 aa6.73□□□□□ -1.33
RNF4-221ENST00000513643 TYMSP04818 313 aa6.73□□□□□ -1.33
RNF4-221ENST00000513643 TPT1P13693 172 aaKnown RBP6.73□□□□□ -1.33
RNF4-221ENST00000513643 UBE2G2P60604 165 aa6.73□□□□□ -1.33
RNF4-221ENST00000513643 OR5I1Q13606 314 aa6.73□□□□□ -1.33
RNF4-221ENST00000513643 SFT2D1Q8WV19 159 aa6.73□□□□□ -1.33
RNF4-221ENST00000513643 KCNS1Q96KK3 526 aa6.73□□□□□ -1.33
RNF4-221ENST00000513643 MRPL16Q9NX20 251 aaKnown RBP6.73□□□□□ -1.33
RNF4-221ENST00000513643 LINC00588Q9Y4M8 146 aa6.73□□□□□ -1.33
RNF4-221ENST00000513643 TRGV2A0A075B6R0 118 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 A0A096LPF7 62 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 IGKV3D-20A0A0C4DH25 116 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 M0R2P5 195 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 GCGP01275 180 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 RAB5CP51148 216 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 SMUG1Q53HV7 270 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 DNLZQ5SXM8 178 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 PRNTQ86SH4 94 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 Q86TA4 180 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 C9orf85Q96MD7 179 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 NDFIP1Q9BT67 221 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 UPK3BQ9BT76 320 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 ZFP30Q9Y2G7 519 aa6.72□□□□□ -1.33
RNF4-221ENST00000513643 LRP1BQ9NZR2 4599 aa6.71□□□□□ -1.33
RNF4-221ENST00000513643 A0A0J9YY99 117 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 RTL8CO15255 209 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 PAGE4O60829 102 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 NUDT3O95989 172 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 LTAP01374 205 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 IFNA7P01567 189 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 H2AFB1P0C5Y9 115 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 RNASE3P12724 160 aaKnown RBP6.71□□□□□ -1.34
RNF4-221ENST00000513643 SULT1A2P50226 295 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 CRYBA4P53673 196 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 CCL20P78556 96 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 SLAQ13239 276 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 ESRGQ1W209 222 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 C9orf62Q8N4C0 152 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 FAM213BQ8TBF2 198 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 FMC1Q96HJ9 113 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 ZNF479Q96JC4 524 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 SDF2L1Q9HCN8 221 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 PRO0255Q9UI72 69 aa6.71□□□□□ -1.34
RNF4-221ENST00000513643 TRAV4A0A0B4J268 109 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 A0A1B0GVY2 172 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 FABP5P3A8MUU1 101 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 PFDN1O60925 122 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 PPT1P50897 306 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 CCL18P55774 89 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 ZNF674Q2M3X9 581 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 PIK3CD-AS1Q5SR53 167 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 SLC51BQ86UW2 128 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 ZC2HC1AQ96GY0 325 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 MLST8Q9BVC4 326 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 NAGKQ9UJ70 344 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 HHLA3Q9XRX5 114 aa6.7□□□□□ -1.34
RNF4-221ENST00000513643 DNAH5Q8TE73 4624 aa6.69□□□□□ -1.34
RNF4-221ENST00000513643 EIF5AL1Q6IS14 154 aaKnown RBP6.69□□□□□ -1.34
RNF4-221ENST00000513643 LINC00336Q6ZUF6 198 aa6.69□□□□□ -1.34
RNF4-221ENST00000513643 AKAP14Q86UN6 197 aa6.69□□□□□ -1.34
RNF4-221ENST00000513643 MRPS16Q9Y3D3 137 aaKnown RBP6.69□□□□□ -1.34
RNF4-221ENST00000513643 NBDYA0A0U1RRE5 68 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 A0A1B0GVG6 124 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 PGPEP1LA6NFU8 196 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 KRBOX1C9JBD0 128 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 RS1O15537 224 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 PAX4O43316 350 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 CIDEAO60543 219 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 IGHV3-53P01767 116 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 S100A9P06702 114 aaKnown RBP6.68□□□□□ -1.34
RNF4-221ENST00000513643 SFTA3P0C7M3 94 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 GATA1P15976 413 aaPredicted RBP6.68□□□□□ -1.34
RNF4-221ENST00000513643 ZFP69Q49AA0 526 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 CFAP126Q5VTH2 177 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 CST9LP1Q5W188 147 aa6.68□□□□□ -1.34
RNF4-221ENST00000513643 UFSP1Q6NVU6 142 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms