RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 SLC50A1Q9BRV3 221 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 TPPP3Q9BW30 176 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 DUSP21Q9H596 190 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 SLC25A22Q9H936 323 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 IFT46Q9NQC8 304 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 ANAPC10Q9UM13 185 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 TPRKBQ9Y3C4 175 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 KLF12Q9Y4X4 402 aa2.3□□□□□ -2.04
PDLIM5-218ENST00000513341 TRAV6A0A075B6T7 132 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 SERTM2A0A1B0GWG4 89 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 CEBPZOSA8MTT3 80 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 GGTLC3B5MD39 225 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 TAAR5O14804 337 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 LECT2O14960 151 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 PMP2P02689 132 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 TAGLN2P37802 199 aaKnown RBP2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 PPT1P50897 306 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 PLP1P60201 277 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 RAB11AP62491 216 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 SPINK6Q6UWN8 80 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 FAM159AQ6UWV7 190 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 LCN15Q6UWW0 184 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 ACOT7LQ6ZUV0 252 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 LGI3Q8N145 548 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 OR1S1Q8NH92 325 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 ZFAND1Q8TCF1 268 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 IL22RA2Q969J5 263 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 C2orf50Q96LR7 162 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 LINC00477Q96M19 166 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 SHANK2-AS3Q9BTD1 123 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 TMEM147Q9BVK8 224 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 OCR1Q9BZK8 76 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 FXYD6Q9H0Q3 95 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 ZNF331Q9NQX6 463 aaPredicted RBP2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 MBD2Q9UBB5 411 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 VAX2Q9UIW0 290 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 RPH3ALQ9UNE2 315 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 PRELID1Q9Y255 219 aa2.29□□□□□ -2.04
PDLIM5-218ENST00000513341 IGKV1OR2-108A0A075B7D4 117 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 LOC100506127A0A0U1RQW1 187 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 C7orf71A4D174 169 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 KLLNB2CW77 178 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 ATP6V1G1O75348 118 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 IGHV3-53P01767 116 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 IGHV3-30P01768 117 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 IGHV3-33P01772 117 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 CT45A10P0DMU9 189 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 IGHV3-30-3P0DP02 117 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 IGHV3-30-5P0DP03 117 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 ORM2P19652 201 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 GATA2P23769 480 aaPredicted RBP2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 PRSS3P35030 304 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 RCVRNP35243 200 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 FHITP49789 147 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 PIGPP57054 158 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 SELENOTP62341 195 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 POLR2GP62487 172 aaKnown RBP eCLIP2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 CIRBPQ14011 172 aaKnown RBP2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 ELOBQ15370 118 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 ATRAIDQ6UW56 229 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 DPPA3Q6W0C5 159 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 SDIM1Q6ZPB5 146 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 PRSS48Q7RTY5 328 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 CCDC71LQ8N9Z2 235 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 RNASE11Q8TAA1 199 aaKnown RBP2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 DTD1Q8TEA8 209 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 TP53RKQ96S44 253 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 TMEM222Q9H0R3 208 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 GTSF1LQ9H1H1 148 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 JPT2Q9H910 190 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 NUDT15Q9NV35 164 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 NDUFB11Q9NX14 153 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 COPZ2Q9P299 210 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 SSR3Q9UNL2 185 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 CBY1Q9Y3M2 126 aa2.28□□□□□ -2.04
PDLIM5-218ENST00000513341 IGKV2D-24A0A075B6R9 120 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 IGHV1OR15-1A0A075B7D0 117 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 A0A087WWC5 75 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 TRAV4A0A0B4J268 109 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 PIGBOS1A0A0B4J2F0 54 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 A0A0G2JRQ6 117 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 TRBV7-9A0A0J9YWB2 115 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 TRBV6-4A0A1B0GX49 114 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 H3BRN7 92 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 MRPS12O15235 138 aaKnown RBP2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 PITX3O75364 302 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 HYPMO75409 117 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 CCNKO75909 580 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 GPX1P07203 203 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 GNAO1P09471 354 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 SULT1A3P0DMM9 295 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 SULT1A4P0DMN0 295 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 PGAM2P15259 253 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 CRISP2P16562 243 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 HLA-DMAP28067 261 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 SSTP61278 116 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 RPL19P84098 196 aaKnown RBP2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 Q0VG73 95 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 RIGQ13278 110 aa2.27□□□□□ -2.05
PDLIM5-218ENST00000513341 GUK1Q16774 197 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms