RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 RBAKDNA6NC62 111 aa7.07□□□□□ -1.28
LIMCH1-215ENST00000512632 G3V4G9 280 aa7.07□□□□□ -1.28
LIMCH1-215ENST00000512632 AJUBAQ96IF1 538 aa7.07□□□□□ -1.28
LIMCH1-215ENST00000512632 CENPVL3A0A0U1RRI6 287 aa7.07□□□□□ -1.28
LIMCH1-215ENST00000512632 UBE2E1P51965 193 aa7.07□□□□□ -1.28
LIMCH1-215ENST00000512632 MTURNQ8N3F0 131 aa7.07□□□□□ -1.28
LIMCH1-215ENST00000512632 BPESC1Q9GZL8 116 aa7.07□□□□□ -1.28
LIMCH1-215ENST00000512632 C14orf178Q8N769 122 aaPredicted RBP7.07□□□□□ -1.28
LIMCH1-215ENST00000512632 OR5A1Q8NGJ0 315 aa7.07□□□□□ -1.28
LIMCH1-215ENST00000512632 C20orf173Q96LM9 149 aa7.07□□□□□ -1.28
LIMCH1-215ENST00000512632 TRBV12-3P01733 135 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 ATP5G2Q06055 141 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 SRSF1Q07955 248 aaKnown RBP eCLIP7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 NEGR1Q7Z3B1 354 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 PIFOQ8TCI5 191 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 HIGD1BQ9P298 99 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 TEX48A0A1B0GUV7 120 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 F6UB75 175 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 IGHV3-11P01762 117 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 AMTNQ6UX39 209 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 LCNL1Q6ZST4 164 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 RPL39LQ96EH5 51 aaKnown RBP7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 HIST1H4GQ99525 98 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 SMPXQ9UHP9 88 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 LINC01546A6NGU7 62 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 UNQ9165/PRO28630Q6UXU0 137 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 CEND1Q8N111 149 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 RAXQ9Y2V3 346 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 SORL1Q92673 2214 aa7.06□□□□□ -1.28
LIMCH1-215ENST00000512632 MGPP08493 103 aa7.05□□□□□ -1.28
LIMCH1-215ENST00000512632 A0A087WX48 190 aa7.05□□□□□ -1.28
LIMCH1-215ENST00000512632 NBL1P41271 181 aa7.05□□□□□ -1.28
LIMCH1-215ENST00000512632 BRD3OSQ6XYD6 125 aa7.05□□□□□ -1.28
LIMCH1-215ENST00000512632 SCGB3A1Q96QR1 104 aa7.05□□□□□ -1.28
LIMCH1-215ENST00000512632 C9orf47Q6ZRZ4 202 aa7.05□□□□□ -1.28
LIMCH1-215ENST00000512632 DOPEY2Q9Y3R5 2298 aa7.05□□□□□ -1.28
LIMCH1-215ENST00000512632 NPFFO15130 113 aa7.05□□□□□ -1.28
LIMCH1-215ENST00000512632 WFDC2Q14508 124 aa7.05□□□□□ -1.28
LIMCH1-215ENST00000512632 PHLDA1Q8WV24 401 aaPredicted RBP7.05□□□□□ -1.28
LIMCH1-215ENST00000512632 WFDC12Q8WWY7 111 aa7.05□□□□□ -1.28
LIMCH1-215ENST00000512632 SMIM2Q9BVW6 85 aa7.05□□□□□ -1.28
LIMCH1-215ENST00000512632 TRBV7-1A0A0A6YYK4 115 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 SRD5A1P18405 259 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 CYSLTR1Q9Y271 337 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 GNRH2O43555 120 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 TM2D2Q9BX73 214 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 PHLDA3Q9Y5J5 127 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 TRAV41A0A0B4J266 112 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 H3BMG7 143 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 ARL3P36405 182 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 LMO4P61968 165 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 LY6EQ16553 131 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 C5orf56Q8N8D9 126 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 ZNF479Q96JC4 524 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 IGLL5B9A064 214 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 RNASE4P34096 147 aaKnown RBP7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 SUMO2P61956 95 aaKnown RBP7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 C12orf74Q32Q52 190 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 ANXA2RQ3ZCQ2 193 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 PSMG4Q5JS54 123 aa7.04□□□□□ -1.28
LIMCH1-215ENST00000512632 OR11H12B2RN74 326 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 OR11H1Q8NG94 326 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 OR11H2Q8NH07 326 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 U3KQE9 123 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 F8VRH5 84 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 KLRB1Q12918 225 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 SFTA2Q6UW10 78 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 RASL10AQ92737 203 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 CHTOPQ9Y3Y2 248 aaKnown RBP7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 EMP1P54849 157 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 SH2D6Q7Z4S9 175 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 ZFAND2AQ8N6M9 145 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 H7C1H1 209 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 SCGB2A2Q13296 93 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 OR10J6PQ8NGY7 276 aa7.03□□□□□ -1.28
LIMCH1-215ENST00000512632 ETDBQ3ZM63 59 aa7.02□□□□□ -1.29
LIMCH1-215ENST00000512632 GPHB5Q86YW7 130 aa7.02□□□□□ -1.29
LIMCH1-215ENST00000512632 TMEM238C9JI98 176 aa7.02□□□□□ -1.29
LIMCH1-215ENST00000512632 E9PLD3 99 aa7.02□□□□□ -1.29
LIMCH1-215ENST00000512632 PLNP26678 52 aa7.02□□□□□ -1.29
LIMCH1-215ENST00000512632 C2orf66Q6UXQ4 117 aa7.02□□□□□ -1.29
LIMCH1-215ENST00000512632 C9orf139Q6ZV77 190 aa7.02□□□□□ -1.29
LIMCH1-215ENST00000512632 MRPL53Q96EL3 112 aaKnown RBP7.02□□□□□ -1.29
LIMCH1-215ENST00000512632 IGHV4-4A0A075B6R2 117 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 TRAV21A0A0B4J279 112 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 ASIPP42127 132 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 MRAP2Q96G30 205 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 PF4V1P10720 104 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 FOXI2Q6ZQN5 318 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 KLHL30-AS1Q8NEE0 82 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 LINC00477Q96M19 166 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 GTSF1LQ9H1H1 148 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 DPH3P1Q9H4G8 78 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 JPT2Q9H910 190 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 PRSS29PA6NIE9 313 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 PRSS47A8MTI9 375 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 ORMDL2Q53FV1 153 aa7.01□□□□□ -1.29
LIMCH1-215ENST00000512632 CD300EQ496F6 205 aaPredicted RBP7□□□□□ -1.29
LIMCH1-215ENST00000512632 PRADC1Q9BSG0 188 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms