RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 K7ENP7 123 aa8.68□□□□□ -1.02
CPNE4-209ENST00000512055 WFDC2Q14508 124 aa8.68□□□□□ -1.02
CPNE4-209ENST00000512055 SS18Q15532 418 aa8.68□□□□□ -1.02
CPNE4-209ENST00000512055 C11orf53Q8IXP5 236 aa8.68□□□□□ -1.02
CPNE4-209ENST00000512055 TRGV1A0A0A0MS02 117 aa8.68□□□□□ -1.02
CPNE4-209ENST00000512055 DKK4Q9UBT3 224 aa8.68□□□□□ -1.02
CPNE4-209ENST00000512055 SPRNQ5BIV9 151 aa8.68□□□□□ -1.02
CPNE4-209ENST00000512055 CACNA1AO00555 2505 aa8.68□□□□□ -1.02
CPNE4-209ENST00000512055 F5H768 121 aa8.68□□□□□ -1.02
CPNE4-209ENST00000512055 DEFB125Q8N687 156 aa8.68□□□□□ -1.02
CPNE4-209ENST00000512055 NKAPP1Q8N9T2 125 aa8.68□□□□□ -1.02
CPNE4-209ENST00000512055 A0A1W2PRX2 142 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 SIVA1O15304 175 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 ARMS2P0C7Q2 107 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 C8orf46Q8TAG6 207 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 C15orf65H3BRN8 121 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 C20orf173Q96LM9 149 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 OVOL1O14753 267 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 MRPL35Q9NZE8 188 aaKnown RBP8.67□□□□□ -1.02
CPNE4-209ENST00000512055 KLF2Q9Y5W3 355 aaPredicted RBP8.67□□□□□ -1.02
CPNE4-209ENST00000512055 TRAV13-2A0A0B4J235 113 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 IGHV1-3A0A0C4DH29 117 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 CFHR2P36980 270 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 C17orf58Q2M2W7 97 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 CDPF1Q6NVV7 123 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 ACACBO00763 2458 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 ORMDL1Q9P0S3 153 aa8.67□□□□□ -1.02
CPNE4-209ENST00000512055 PROP1O75360 226 aa8.66□□□□□ -1.02
CPNE4-209ENST00000512055 CR1LQ2VPA4 569 aa8.66□□□□□ -1.02
CPNE4-209ENST00000512055 TEN1Q86WV5 123 aa8.66□□□□□ -1.02
CPNE4-209ENST00000512055 LY96Q9Y6Y9 160 aa8.66□□□□□ -1.02
CPNE4-209ENST00000512055 RPL15P61313 204 aaKnown RBP8.66□□□□□ -1.02
CPNE4-209ENST00000512055 IGHV2-5P01817 119 aa8.66□□□□□ -1.02
CPNE4-209ENST00000512055 DEFB105AQ8NG35 78 aa8.66□□□□□ -1.02
CPNE4-209ENST00000512055 WIPF2Q8TF74 440 aaPredicted RBP8.66□□□□□ -1.02
CPNE4-209ENST00000512055 MSRB2Q9Y3D2 182 aa8.66□□□□□ -1.02
CPNE4-209ENST00000512055 IGF2RP11717 2491 aa8.66□□□□□ -1.02
CPNE4-209ENST00000512055 TMEM213A2RRL7 107 aa8.66□□□□□ -1.02
CPNE4-209ENST00000512055 GATA4P43694 442 aa8.66□□□□□ -1.02
CPNE4-209ENST00000512055 IGFL2Q6UWQ7 119 aa8.66□□□□□ -1.02
CPNE4-209ENST00000512055 FAM168AQ92567 244 aa8.66□□□□□ -1.02
CPNE4-209ENST00000512055 NDUFC2-KCTD14E9PQ53 114 aa8.65□□□□□ -1.02
CPNE4-209ENST00000512055 PSCAO43653 123 aa8.65□□□□□ -1.02
CPNE4-209ENST00000512055 ZNF726P1Q15940 193 aa8.65□□□□□ -1.02
CPNE4-209ENST00000512055 IGLV3-9A0A075B6K5 115 aa8.65□□□□□ -1.02
CPNE4-209ENST00000512055 BUB3O43684 328 aa8.65□□□□□ -1.02
CPNE4-209ENST00000512055 LGALS9BQ3B8N2 356 aa8.65□□□□□ -1.02
CPNE4-209ENST00000512055 LGALS9CQ6DKI2 356 aa8.65□□□□□ -1.02
CPNE4-209ENST00000512055 MED12LQ86YW9 2145 aa8.65□□□□□ -1.02
CPNE4-209ENST00000512055 C20orf197Q8N268 126 aa8.65□□□□□ -1.02
CPNE4-209ENST00000512055 FAM236DA0A1B0GTK5 79 aa8.65□□□□□ -1.03
CPNE4-209ENST00000512055 FAM236CP0DP71 79 aa8.65□□□□□ -1.03
CPNE4-209ENST00000512055 FOXI1Q12951 378 aa8.65□□□□□ -1.03
CPNE4-209ENST00000512055 TRBV12-3P01733 135 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 SIGLEC15Q6ZMC9 328 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 NUP210LQ5VU65 1888 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 IGLL5B9A064 214 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 PFN1P07737 140 aaKnown RBP8.64□□□□□ -1.03
CPNE4-209ENST00000512055 IGLC1P0CG04 106 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 CRIP3Q6Q6R5 217 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 C7orf69Q9H7B7 122 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 LRP4O75096 1905 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 ZC2HC1AQ96GY0 325 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 LINC00479Q96M42 142 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 PTPRQQ9UMZ3 2332 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 BUB1B-PAK6H3BSN5 160 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 J3QQQ9 107 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 ZNF561-AS1K7EIQ3 104 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 GNLYP22749 145 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 NDUFV3P56181 108 aaKnown RBP8.64□□□□□ -1.03
CPNE4-209ENST00000512055 RNF152Q8N8N0 203 aa8.64□□□□□ -1.03
CPNE4-209ENST00000512055 FOXE3Q13461 319 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 SPANXB1Q9NS25 103 aaPredicted RBP8.63□□□□□ -1.03
CPNE4-209ENST00000512055 IGFL4Q6B9Z1 124 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 FOXI2Q6ZQN5 318 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 C10orf105Q8TEF2 133 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 FUSP35637 526 aaKnown RBP eCLIP8.63□□□□□ -1.03
CPNE4-209ENST00000512055 DIAPH2-AS1Q14236 149 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 SIGLEC8Q9NYZ4 499 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 SIGLEC9Q9Y336 463 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 THAP8Q8NA92 274 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 TMEM14BQ9NUH8 114 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 PLA2G2EQ9NZK7 142 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 K7ERS5 55 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 Q6ZUT4 128 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 SEM1Q6ZVN7 128 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 VMO1Q7Z5L0 202 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 Q8TCH9 128 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 TMEM141Q96I45 108 aa8.63□□□□□ -1.03
CPNE4-209ENST00000512055 NCOR2Q9Y618 2525 aa8.62□□□□□ -1.03
CPNE4-209ENST00000512055 CXCL5P42830 114 aa8.62□□□□□ -1.03
CPNE4-209ENST00000512055 LOXL1Q08397 574 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-209ENST00000512055 UNQ6494/PRO21346Q6UXR6 183 aa8.62□□□□□ -1.03
CPNE4-209ENST00000512055 TLN1Q9Y490 2541 aaKnown RBP8.62□□□□□ -1.03
CPNE4-209ENST00000512055 NREPQ16612 68 aa8.62□□□□□ -1.03
CPNE4-209ENST00000512055 PCP2Q8IVA1 136 aa8.62□□□□□ -1.03
CPNE4-209ENST00000512055 DKK2Q9UBU2 259 aa8.62□□□□□ -1.03
CPNE4-209ENST00000512055 LOXP28300 417 aaPredicted RBP8.62□□□□□ -1.03
CPNE4-209ENST00000512055 M0QXV9 152 aa8.61□□□□□ -1.03
CPNE4-209ENST00000512055 Q8N8P6 123 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms