RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 SFTA3P0C7M3 94 aa7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 IFITM2Q01629 132 aa7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 EIF4EBP1Q13541 118 aaPredicted RBP7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 C9orf62Q8N4C0 152 aa7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 RITA1Q96K30 269 aa7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 VCX2Q9H322 139 aa7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 HHLA3Q9XRX5 114 aa7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 KRTAP1-1Q07627 177 aa7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 F8P00451 2351 aa7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 KIAA1549Q9HCM3 1950 aa7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 GYPEP15421 78 aa7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 NUDT10Q8NFP7 164 aa7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 NUDT11Q96G61 164 aa7.28□□□□□ -1.24
POLR2J3-215ENST00000511313 IZUMO1RA6ND01 250 aa7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 K7EQD1 137 aa7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 TCL1AP56279 114 aa7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 H2BFSP57053 126 aa7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 LINC00205P59089 165 aa7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 EXOC3-AS1Q8N2X6 119 aa7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 H7C423 109 aa7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 P0C879 139 aa7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 BEAN1Q3B7T3 259 aa7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 PGLYRP4Q96LB8 373 aa7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 RANBP2P49792 3224 aaKnown RBP7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 PHOX2AO14813 284 aa7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 CEMP1Q6PRD7 247 aaPredicted RBP7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 PARLQ9H300 379 aa7.27□□□□□ -1.25
POLR2J3-215ENST00000511313 TET2Q6N021 2002 aaPredicted RBP7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 RASL10AQ92737 203 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 MUC3AQ02505 3323 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 IGHV3-53P01767 116 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 ARMS2P0C7Q2 107 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 CKS1BP61024 79 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 LYRM7Q5U5X0 104 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 TMEM88Q6PEY1 159 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 PRELID3AQ96N28 172 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 IL36BQ9NZH7 164 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 DOCK11Q5JSL3 2073 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 C8orf49Q96NF6 230 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 LINC00467Q9BRT7 94 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 MED13LQ71F56 2210 aa7.26□□□□□ -1.25
POLR2J3-215ENST00000511313 PRUNE2Q8WUY3 3088 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 KIAA2026Q5HYC2 2103 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 I3L3M4 83 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 M0R2Z0 102 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 TMEM191AQ9H0A3 160 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 ZFAND3Q9H8U3 227 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 IGHV4-28A0A0C4DH34 117 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 C7orf77A4D0Y5 90 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 KLK9Q2XQG4 91 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 FAM222AQ5U5X8 452 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 OR10AG1Q8NH19 301 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 KLK9Q9UKQ9 250 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 ZFYVE26Q68DK2 2539 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 UNC80Q8N2C7 3258 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 GRIFINA4D1Z8 144 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 GAGE12JA6NER3 117 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 GAGE1Q13065 139 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 GAGE4Q13068 117 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 GAGE5Q13069 117 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 GAGE13Q4V321 117 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 UNQ9165/PRO28630Q6UXU0 137 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 SLC25A2Q9BXI2 301 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 AGPAT4-IT1Q9H0P7 198 aa7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 SONP18583 2426 aaKnown RBP7.25□□□□□ -1.25
POLR2J3-215ENST00000511313 G3V4G9 280 aa7.24□□□□□ -1.25
POLR2J3-215ENST00000511313 GSN-AS1Q9NRJ2 163 aa7.24□□□□□ -1.25
POLR2J3-215ENST00000511313 PIEZO2Q9H5I5 2752 aa7.24□□□□□ -1.25
POLR2J3-215ENST00000511313 RAI1Q7Z5J4 1906 aaPredicted RBP7.24□□□□□ -1.25
POLR2J3-215ENST00000511313 ZNF25P17030 456 aaPredicted RBP7.24□□□□□ -1.25
POLR2J3-215ENST00000511313 TMEM136Q6ZRR5 245 aa7.24□□□□□ -1.25
POLR2J3-215ENST00000511313 PRSS46E5RG02 174 aa7.24□□□□□ -1.25
POLR2J3-215ENST00000511313 FAM231DQ6ZW35 169 aa7.24□□□□□ -1.25
POLR2J3-215ENST00000511313 SIVA1O15304 175 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 EGFEM1PQ0D2K5 195 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 LINC00336Q6ZUF6 198 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 NIT2Q9NQR4 276 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 TMEM218A2RU14 115 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 H3BNG1 76 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 H3BQ15 152 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 EGR2P11161 476 aaPredicted RBP7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 FXYD5Q96DB9 178 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 IGKV2D-24A0A075B6R9 120 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 TRBV6-4A0A1B0GX49 114 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 SNRPEP62304 92 aaKnown RBP7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 MLANAQ16655 118 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 ASPHD1Q5U4P2 390 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 ZFAND6Q6FIF0 208 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 CRIP3Q6Q6R5 217 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 ZNF503Q96F45 646 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 TRBV12-3P01733 135 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 GNG5P63218 68 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 MRPL54Q6P161 138 aaKnown RBP7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 RNF182Q8N6D2 247 aa7.23□□□□□ -1.25
POLR2J3-215ENST00000511313 SCO2A0A1W2PP80 73 aa7.22□□□□□ -1.25
POLR2J3-215ENST00000511313 TEX43Q6ZNM6 134 aa7.22□□□□□ -1.25
POLR2J3-215ENST00000511313 PRIMA1Q86XR5 153 aa7.22□□□□□ -1.25
POLR2J3-215ENST00000511313 C20orf78Q9BR46 151 aa7.22□□□□□ -1.25
POLR2J3-215ENST00000511313 C1orf134Q5TEV5 83 aa7.22□□□□□ -1.25
POLR2J3-215ENST00000511313 M0R3E3 92 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms