RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 A0A087X0K7 114 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 SMIM30A4D0T7 59 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 CCSO14618 274 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 PDCD5O14737 125 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 TAAR5O14804 337 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 MRPS12O15235 138 aaKnown RBP3.51□□□□□ -1.85
USP53-206ENST00000510737 MPDU1O75352 247 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 SLC25A5P05141 298 aaKnown RBP3.51□□□□□ -1.85
USP53-206ENST00000510737 FABP1P07148 127 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 RAB3BP20337 219 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 RNASE4P34096 147 aaKnown RBP3.51□□□□□ -1.85
USP53-206ENST00000510737 GPX4P36969 197 aaPredicted RBP3.51□□□□□ -1.85
USP53-206ENST00000510737 AKR1C2P52895 323 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 TRIM16LQ309B1 348 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 SP6Q3SY56 376 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 ATRAIDQ6UW56 229 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 ZNF555Q8NEP9 628 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 LRRC20Q8TCA0 184 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 SPACA4Q8TDM5 124 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 ODF3Q96PU9 254 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 TRGV9Q99603 122 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 MND1Q9BWT6 205 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 TMEM222Q9H0R3 208 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 GTSF1LQ9H1H1 148 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 AUNIPQ9H7T9 357 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 ZNF331Q9NQX6 463 aaPredicted RBP3.51□□□□□ -1.85
USP53-206ENST00000510737 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.51□□□□□ -1.85
USP53-206ENST00000510737 PSORS1C2Q9UIG4 136 aa3.51□□□□□ -1.85
USP53-206ENST00000510737 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
USP53-206ENST00000510737 TRAV26-2A0A0B4J265 109 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 CRYM-AS1A6NIL9 109 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 CEBPZOSA8MTT3 80 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 H3BRN7 92 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 GABARAPH6UMI1 98 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 SCGNO76038 276 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 GABARAPO95166 117 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 RPL7P18124 248 aaKnown RBP3.5□□□□□ -1.85
USP53-206ENST00000510737 RPL19P84098 196 aaKnown RBP3.5□□□□□ -1.85
USP53-206ENST00000510737 TRAM1Q15629 374 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 C1orf146Q5VVC0 180 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 LPCAT3Q6P1A2 487 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 ZNF664Q8N3J9 261 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 SLC25A29Q8N8R3 303 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 UBE2WQ96B02 151 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 FAM19A4Q96LR4 140 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 C2orf50Q96LR7 162 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 SHANK2-AS3Q9BTD1 123 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 TMEM147Q9BVK8 224 aa3.5□□□□□ -1.85
USP53-206ENST00000510737 IGHV1OR15-1A0A075B7D0 117 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 TRAV4A0A0B4J268 109 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 C5orf52A6NGY3 159 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 CFDP00746 253 aaPredicted RBP3.49□□□□□ -1.85
USP53-206ENST00000510737 S100GP29377 79 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 ERCC8Q13216 396 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 PRR9Q5T870 116 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 NIT1Q86X76 327 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 BPIFCQ8NFQ6 507 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 OR4C5Q8NGB2 326 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 OR5H6Q8NGV6 325 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 LYPD6BQ8NI32 183 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 LINC00477Q96M19 166 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 C9orf16Q9BUW7 83 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 ACOT13Q9NPJ3 140 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 RHBDL2Q9NX52 303 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 ANAPC10Q9UM13 185 aa3.49□□□□□ -1.85
USP53-206ENST00000510737 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
USP53-206ENST00000510737 C3orf85A0A1B0GTC6 90 aa3.48□□□□□ -1.85
USP53-206ENST00000510737 H3BTX0 84 aa3.48□□□□□ -1.85
USP53-206ENST00000510737 SLC17A3O00476 420 aa3.48□□□□□ -1.85
USP53-206ENST00000510737 OR10J4P0C629 311 aa3.48□□□□□ -1.85
USP53-206ENST00000510737 ENHOQ6UWT2 76 aa3.48□□□□□ -1.85
USP53-206ENST00000510737 LGI3Q8N145 548 aa3.48□□□□□ -1.85
USP53-206ENST00000510737 DHRSXQ8N5I4 330 aa3.48□□□□□ -1.85
USP53-206ENST00000510737 OR5H2Q8NGV7 314 aa3.48□□□□□ -1.85
USP53-206ENST00000510737 Q8TAT8 98 aa3.48□□□□□ -1.85
USP53-206ENST00000510737 SLC25A38Q96DW6 304 aa3.48□□□□□ -1.85
USP53-206ENST00000510737 AGPAT4-IT1Q9H0P7 198 aa3.48□□□□□ -1.85
USP53-206ENST00000510737 U3KQ87 197 aa3.48□□□□□ -1.85
USP53-206ENST00000510737 IGLV8-61A0A075B6I0 122 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 FABP12A6NFH5 140 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 GPX1P07203 203 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 GNAO1P09471 354 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 HLA-DMAP28067 261 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 PIGPP57054 158 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 RND3P61587 244 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 TSPAN5P62079 268 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 CNBPP62633 177 aaKnown RBP3.47□□□□□ -1.85
USP53-206ENST00000510737 CACNG7P62955 275 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 GNGT1P63211 74 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 PATE2Q6UY27 113 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 ACOT7LQ6ZUV0 252 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 LHFPL5Q8TAF8 219 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 IFT46Q9NQC8 304 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 RAB26Q9ULW5 256 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 SSR3Q9UNL2 185 aa3.47□□□□□ -1.85
USP53-206ENST00000510737 IGHV3-64A0A075B6Q5 118 aa3.46□□□□□ -1.86
USP53-206ENST00000510737 TRBV6-4A0A1B0GX49 114 aa3.46□□□□□ -1.86
USP53-206ENST00000510737 HYPMO75409 117 aa3.46□□□□□ -1.86
USP53-206ENST00000510737 CDS2O95674 445 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms