RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 FDCSPQ8NFU4 85 aa6.71□□□□□ -1.34
HTT-208ENST00000510626 IGHV3-64A0A075B6Q5 118 aa6.71□□□□□ -1.34
HTT-208ENST00000510626 TRAV13-1A0A0B4J241 112 aa6.71□□□□□ -1.34
HTT-208ENST00000510626 TRAV3A0A0B4J244 114 aa6.71□□□□□ -1.34
HTT-208ENST00000510626 A4D1N5 150 aa6.71□□□□□ -1.34
HTT-208ENST00000510626 SUMO4Q6EEV6 95 aa6.71□□□□□ -1.34
HTT-208ENST00000510626 RMI2Q96E14 147 aa6.71□□□□□ -1.34
HTT-208ENST00000510626 USP9YO00507 2555 aaPredicted RBP6.7□□□□□ -1.34
HTT-208ENST00000510626 C17orf82Q86X59 251 aaPredicted RBP6.7□□□□□ -1.34
HTT-208ENST00000510626 Q6ZUT4 128 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 P0DMU3 169 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 FAM231AP0DMU4 169 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 FAM231CP0DMU5 169 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 TEX36Q5VZQ5 186 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 C1orf159Q96HA4 380 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 TIMM17AQ99595 171 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 IGHV1OR15-1A0A075B7D0 117 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 C1orf122Q6ZSJ8 110 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 RNF138Q8WVD3 245 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 IGKV1-6A0A0C4DH72 117 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 MRPL35Q9NZE8 188 aaKnown RBP6.7□□□□□ -1.34
HTT-208ENST00000510626 TMEM256-PLSCR3K7ERE1 68 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 PRR20EP86478 221 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 PRR20CP86479 221 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 PRR20DP86480 221 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 PRR20BP86481 221 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 PRR20AP86496 221 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 Q8TAT8 98 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 TRGV1A0A0A0MS02 117 aa6.7□□□□□ -1.34
HTT-208ENST00000510626 NUP210LQ5VU65 1888 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 S4R3C0 116 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 ACANP16112 2415 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 CYYR1Q96J86 154 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 M0QXV9 152 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 IGLV3-1P01715 115 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 FAM27E3Q08E93 113 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 ICOSQ9Y6W8 199 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 CRLF1O75462 422 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 EFNA4P52798 201 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 PPIFP30405 207 aaKnown RBP6.69□□□□□ -1.34
HTT-208ENST00000510626 FUSP35637 526 aaKnown RBP eCLIP6.69□□□□□ -1.34
HTT-208ENST00000510626 WIPF3A6NGB9 483 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 IGHV1-69P01742 117 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 EFNA2O43921 213 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 LINC01620Q4KN68 170 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 TMEM213A2RRL7 107 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 ABCA12Q86UK0 2595 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 CSRP1P21291 193 aaKnown RBP6.69□□□□□ -1.34
HTT-208ENST00000510626 LINC01560Q8TB33 94 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 SPRR3Q9UBC9 169 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 C11orf86A6NJI1 115 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 MORN5Q5VZ52 161 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 CFHR4Q92496 578 aa6.69□□□□□ -1.34
HTT-208ENST00000510626 TEX48A0A1B0GUV7 120 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 MRPL55Q7Z7F7 128 aaKnown RBP6.68□□□□□ -1.34
HTT-208ENST00000510626 ZC2HC1AQ96GY0 325 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 TRAV26-1A0A087WT03 109 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 SLC25A29Q8N8R3 303 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 CR1LQ2VPA4 569 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 K7ERJ3 54 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 EIF4EBP1Q13541 118 aaPredicted RBP6.68□□□□□ -1.34
HTT-208ENST00000510626 CTRLP40313 264 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 C10orf55Q5SWW7 151 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 CRIPAKQ8N1N5 446 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 B4DSR2 109 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 Q6ZSR3 168 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 TP73-AS1Q9UF72 201 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 C15orf65H3BRN8 121 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 FOXE3Q13461 319 aa6.68□□□□□ -1.34
HTT-208ENST00000510626 B3GALT5-AS1P59052 145 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 RHPN1-AS1Q9BWJ2 59 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 FAM201AQ5SY85 155 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 C8orf49Q96NF6 230 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 A0A0G2JRQ6 117 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 A0A1B0GUS0 222 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 FAM236AA0A1B0GUQ0 79 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 FAM236BA0A1B0GV22 79 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 SPAARA0A1B0GVQ0 90 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 MBD3L4A6NDZ8 208 aaPredicted RBP6.67□□□□□ -1.34
HTT-208ENST00000510626 MBD3L3A6NE82 208 aaPredicted RBP6.67□□□□□ -1.34
HTT-208ENST00000510626 MBD3L5A6NJ08 208 aaPredicted RBP6.67□□□□□ -1.34
HTT-208ENST00000510626 MBD3L2Q8NHZ7 208 aaPredicted RBP6.67□□□□□ -1.34
HTT-208ENST00000510626 KAAG1Q9UBP8 84 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 CEACAM8P31997 349 aaPredicted RBP6.67□□□□□ -1.34
HTT-208ENST00000510626 NKAPP1Q8N9T2 125 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 TRBV10-2A0A0K0K1G8 114 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 DAZ2Q13117 558 aaKnown RBP6.67□□□□□ -1.34
HTT-208ENST00000510626 DAZ4Q86SG3 579 aaKnown RBP6.67□□□□□ -1.34
HTT-208ENST00000510626 DAZ3Q9NR90 486 aaKnown RBP6.67□□□□□ -1.34
HTT-208ENST00000510626 CSRP2Q16527 193 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 HAMPP81172 84 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 SS18L2Q9UHA2 77 aa6.67□□□□□ -1.34
HTT-208ENST00000510626 RBX1P62877 108 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 MDS2Q8NDY4 140 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 C1orf43Q9BWL3 253 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 CEP192Q8TEP8 1941 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 PIP4P2Q8N4L2 257 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 A0A087WWL8 130 aa6.66□□□□□ -1.34
HTT-208ENST00000510626 CD59P13987 128 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms