RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 H3BNG1 76 aa8.21□□□□□ -1.1
HMGXB3-203ENST00000510472 IFNA7P01567 189 aa8.21□□□□□ -1.1
HMGXB3-203ENST00000510472 H2AFB1P0C5Y9 115 aa8.21□□□□□ -1.1
HMGXB3-203ENST00000510472 RAB5CP51148 216 aa8.21□□□□□ -1.1
HMGXB3-203ENST00000510472 PRNTQ86SH4 94 aa8.21□□□□□ -1.1
HMGXB3-203ENST00000510472 C9orf62Q8N4C0 152 aa8.21□□□□□ -1.1
HMGXB3-203ENST00000510472 RASL10AQ92737 203 aa8.21□□□□□ -1.1
HMGXB3-203ENST00000510472 TCEAL7Q9BRU2 100 aa8.21□□□□□ -1.1
HMGXB3-203ENST00000510472 NDFIP1Q9BT67 221 aa8.21□□□□□ -1.1
HMGXB3-203ENST00000510472 TRGV11A0A075B6L2 103 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 TRBV6-1A0A0K0K1D8 114 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 PAGE4O60829 102 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 GCGP01275 180 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 PFN1P07737 140 aaKnown RBP8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 SULT1A2P50226 295 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 CCL20P78556 96 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 ZNF415Q09FC8 603 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 TMEM183BQ1AE95 376 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 RNF212Q495C1 297 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 SMUG1Q53HV7 270 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 SLC51BQ86UW2 128 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 TMEM183AQ8IXX5 376 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 SPXQ9BT56 116 aa8.2□□□□□ -1.1
HMGXB3-203ENST00000510472 TRGV2A0A075B6R0 118 aa8.19□□□□□ -1.1
HMGXB3-203ENST00000510472 TYMSP04818 313 aa8.19□□□□□ -1.1
HMGXB3-203ENST00000510472 CRIP1P50238 77 aa8.19□□□□□ -1.1
HMGXB3-203ENST00000510472 PPT1P50897 306 aa8.19□□□□□ -1.1
HMGXB3-203ENST00000510472 EIF5AL1Q6IS14 154 aaKnown RBP8.19□□□□□ -1.1
HMGXB3-203ENST00000510472 Q86TA4 180 aa8.19□□□□□ -1.1
HMGXB3-203ENST00000510472 ZNF575Q86XF7 245 aa8.19□□□□□ -1.1
HMGXB3-203ENST00000510472 VSIG2Q96IQ7 327 aa8.19□□□□□ -1.1
HMGXB3-203ENST00000510472 KCNS1Q96KK3 526 aa8.19□□□□□ -1.1
HMGXB3-203ENST00000510472 MRPL16Q9NX20 251 aaKnown RBP8.19□□□□□ -1.1
HMGXB3-203ENST00000510472 TRAV26-1A0A087WT03 109 aa8.18□□□□□ -1.1
HMGXB3-203ENST00000510472 IGKV3D-20A0A0C4DH25 116 aa8.18□□□□□ -1.1
HMGXB3-203ENST00000510472 OR5I1Q13606 314 aa8.18□□□□□ -1.1
HMGXB3-203ENST00000510472 CST9LP1Q5W188 147 aa8.18□□□□□ -1.1
HMGXB3-203ENST00000510472 FMC1Q96HJ9 113 aa8.18□□□□□ -1.1
HMGXB3-203ENST00000510472 SDF2L1Q9HCN8 221 aa8.18□□□□□ -1.1
HMGXB3-203ENST00000510472 NAGKQ9UJ70 344 aa8.18□□□□□ -1.1
HMGXB3-203ENST00000510472 ZFP30Q9Y2G7 519 aa8.18□□□□□ -1.1
HMGXB3-203ENST00000510472 FABP5P3A8MUU1 101 aa8.17□□□□□ -1.1
HMGXB3-203ENST00000510472 M0R2P5 195 aa8.17□□□□□ -1.1
HMGXB3-203ENST00000510472 LTAP01374 205 aa8.17□□□□□ -1.1
HMGXB3-203ENST00000510472 FHL2Q14192 279 aa8.17□□□□□ -1.1
HMGXB3-203ENST00000510472 A0A0J9YY99 117 aa8.16□□□□□ -1.1
HMGXB3-203ENST00000510472 A0A1B0GV50 99 aa8.16□□□□□ -1.1
HMGXB3-203ENST00000510472 NUDT3O95989 172 aa8.16□□□□□ -1.1
HMGXB3-203ENST00000510472 FAM3BP58499 235 aaPredicted RBP8.16□□□□□ -1.1
HMGXB3-203ENST00000510472 ZFP69Q49AA0 526 aa8.16□□□□□ -1.1
HMGXB3-203ENST00000510472 PTH2Q96A98 100 aa8.16□□□□□ -1.1
HMGXB3-203ENST00000510472 ZC2HC1AQ96GY0 325 aa8.16□□□□□ -1.1
HMGXB3-203ENST00000510472 C9orf85Q96MD7 179 aa8.16□□□□□ -1.1
HMGXB3-203ENST00000510472 MUC4Q99102 2169 aa8.16□□□□□ -1.1
HMGXB3-203ENST00000510472 DNAH2Q9P225 4427 aa8.15□□□□□ -1.1
HMGXB3-203ENST00000510472 SCO2A0A1W2PP80 73 aa8.15□□□□□ -1.1
HMGXB3-203ENST00000510472 S100A9P06702 114 aaKnown RBP8.15□□□□□ -1.1
HMGXB3-203ENST00000510472 RNASE3P12724 160 aaKnown RBP8.15□□□□□ -1.1
HMGXB3-203ENST00000510472 ZNF674Q2M3X9 581 aa8.15□□□□□ -1.1
HMGXB3-203ENST00000510472 DNLZQ5SXM8 178 aa8.15□□□□□ -1.1
HMGXB3-203ENST00000510472 Q6ZR54 194 aa8.15□□□□□ -1.1
HMGXB3-203ENST00000510472 ZNF479Q96JC4 524 aa8.15□□□□□ -1.1
HMGXB3-203ENST00000510472 MLST8Q9BVC4 326 aa8.15□□□□□ -1.1
HMGXB3-203ENST00000510472 LINC00588Q9Y4M8 146 aa8.15□□□□□ -1.1
HMGXB3-203ENST00000510472 A0A096LPF7 62 aa8.14□□□□□ -1.11
HMGXB3-203ENST00000510472 IGHV3-53P01767 116 aa8.14□□□□□ -1.11
HMGXB3-203ENST00000510472 CRYBA4P53673 196 aa8.14□□□□□ -1.11
HMGXB3-203ENST00000510472 SLAQ13239 276 aa8.14□□□□□ -1.11
HMGXB3-203ENST00000510472 ZNRF2Q8NHG8 242 aa8.14□□□□□ -1.11
HMGXB3-203ENST00000510472 C11orf52Q96A22 123 aa8.14□□□□□ -1.11
HMGXB3-203ENST00000510472 MANBALQ9NQG1 85 aa8.14□□□□□ -1.11
HMGXB3-203ENST00000510472 GNG13Q9P2W3 67 aa8.14□□□□□ -1.11
HMGXB3-203ENST00000510472 PRO0255Q9UI72 69 aa8.14□□□□□ -1.11
HMGXB3-203ENST00000510472 HHLA3Q9XRX5 114 aa8.14□□□□□ -1.11
HMGXB3-203ENST00000510472 TRAV4A0A0B4J268 109 aa8.13□□□□□ -1.11
HMGXB3-203ENST00000510472 KRBOX1C9JBD0 128 aa8.13□□□□□ -1.11
HMGXB3-203ENST00000510472 SH2D1AO60880 128 aa8.13□□□□□ -1.11
HMGXB3-203ENST00000510472 SFTA3P0C7M3 94 aa8.13□□□□□ -1.11
HMGXB3-203ENST00000510472 AKR1C3P42330 323 aa8.13□□□□□ -1.11
HMGXB3-203ENST00000510472 UBE2G1P62253 170 aa8.13□□□□□ -1.11
HMGXB3-203ENST00000510472 ESRGQ1W209 222 aa8.13□□□□□ -1.11
HMGXB3-203ENST00000510472 TXNDC17Q9BRA2 123 aa8.13□□□□□ -1.11
HMGXB3-203ENST00000510472 FRAS1Q86XX4 4008 aa8.12□□□□□ -1.11
HMGXB3-203ENST00000510472 FAT2Q9NYQ8 4349 aa8.12□□□□□ -1.11
HMGXB3-203ENST00000510472 PGPEP1LA6NFU8 196 aa8.12□□□□□ -1.11
HMGXB3-203ENST00000510472 PAX4O43316 350 aa8.12□□□□□ -1.11
HMGXB3-203ENST00000510472 NKX2-5P52952 324 aaPredicted RBP8.12□□□□□ -1.11
HMGXB3-203ENST00000510472 CCL18P55774 89 aa8.12□□□□□ -1.11
HMGXB3-203ENST00000510472 LINC01559Q495D7 138 aa8.12□□□□□ -1.11
HMGXB3-203ENST00000510472 ZNF876PQ49A33 203 aa8.12□□□□□ -1.11
HMGXB3-203ENST00000510472 PIK3CD-AS1Q5SR53 167 aa8.12□□□□□ -1.11
HMGXB3-203ENST00000510472 FAM162BQ5T6X4 162 aa8.12□□□□□ -1.11
HMGXB3-203ENST00000510472 UBE2DNLQ8IWF7 75 aa8.12□□□□□ -1.11
HMGXB3-203ENST00000510472 LYPD6BQ8NI32 183 aa8.12□□□□□ -1.11
HMGXB3-203ENST00000510472 DNAH17Q9UFH2 4485 aa8.11□□□□□ -1.11
HMGXB3-203ENST00000510472 B4DEV8 164 aa8.11□□□□□ -1.11
HMGXB3-203ENST00000510472 TEX46H3BTG2 121 aa8.11□□□□□ -1.11
HMGXB3-203ENST00000510472 RS1O15537 224 aa8.11□□□□□ -1.11
HMGXB3-203ENST00000510472 RPL35P42766 123 aaKnown RBP8.11□□□□□ -1.11
HMGXB3-203ENST00000510472 CFAP126Q5VTH2 177 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms