RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 ABCA13Q86UQ4 5058 aa6.95□□□□□ -1.3
SCARB2-204ENST00000509994 TRAV21A0A0B4J279 112 aa6.94□□□□□ -1.3
SCARB2-204ENST00000509994 IGHV3-16A0A0C4DH30 117 aa6.94□□□□□ -1.3
SCARB2-204ENST00000509994 K7EQD1 137 aa6.94□□□□□ -1.3
SCARB2-204ENST00000509994 K7EQM0 130 aa6.94□□□□□ -1.3
SCARB2-204ENST00000509994 ORM1P02763 201 aa6.94□□□□□ -1.3
SCARB2-204ENST00000509994 FUSP35637 526 aaKnown RBP eCLIP6.94□□□□□ -1.3
SCARB2-204ENST00000509994 GNG5P63218 68 aa6.94□□□□□ -1.3
SCARB2-204ENST00000509994 NFE4Q86UQ8 179 aa6.94□□□□□ -1.3
SCARB2-204ENST00000509994 OR10G4Q8NGN3 311 aa6.94□□□□□ -1.3
SCARB2-204ENST00000509994 OR10G9Q8NGN4 311 aa6.94□□□□□ -1.3
SCARB2-204ENST00000509994 OR10G7Q8NGN6 311 aa6.94□□□□□ -1.3
SCARB2-204ENST00000509994 SDF2L1Q9HCN8 221 aa6.94□□□□□ -1.3
SCARB2-204ENST00000509994 TRAV8-1A0A0A6YYK1 113 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 TRAV4A0A0B4J268 109 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 M0R2P5 195 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 GNRH2O43555 120 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 ARL14EPLP0DKL9 152 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 CDC34P49427 236 aaPredicted RBP6.93□□□□□ -1.3
SCARB2-204ENST00000509994 ZFP69Q49AA0 526 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 WFDC10BQ8IUB3 73 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 HSD17B11Q8NBQ5 300 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 TMED6Q8WW62 240 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 ASB13Q8WXK3 278 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 SGK494Q96LW2 274 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 MSRB1Q9NZV6 116 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 TNFRSF18Q9Y5U5 241 aa6.93□□□□□ -1.3
SCARB2-204ENST00000509994 HSPG2P98160 4391 aa6.92□□□□□ -1.3
SCARB2-204ENST00000509994 PSCAO43653 123 aa6.92□□□□□ -1.3
SCARB2-204ENST00000509994 TYMSP04818 313 aa6.92□□□□□ -1.3
SCARB2-204ENST00000509994 DNAH10OSP0CZ25 163 aa6.92□□□□□ -1.3
SCARB2-204ENST00000509994 Q8N1X5 172 aa6.92□□□□□ -1.3
SCARB2-204ENST00000509994 RASL10AQ92737 203 aa6.92□□□□□ -1.3
SCARB2-204ENST00000509994 KCNS1Q96KK3 526 aa6.92□□□□□ -1.3
SCARB2-204ENST00000509994 WFDC1Q9HC57 220 aa6.92□□□□□ -1.3
SCARB2-204ENST00000509994 LOC100131303A0A0U1RQF7 123 aa6.91□□□□□ -1.3
SCARB2-204ENST00000509994 FBLL1A6NHQ2 334 aaKnown RBP6.91□□□□□ -1.3
SCARB2-204ENST00000509994 CRYGDP07320 174 aa6.91□□□□□ -1.3
SCARB2-204ENST00000509994 Q6ZRN7 208 aaPredicted RBP6.91□□□□□ -1.3
SCARB2-204ENST00000509994 SH2D6Q7Z4S9 175 aa6.91□□□□□ -1.3
SCARB2-204ENST00000509994 ALG5Q9Y673 324 aa6.91□□□□□ -1.3
SCARB2-204ENST00000509994 IGHV3-73A0A0B4J1V6 119 aa6.9□□□□□ -1.3
SCARB2-204ENST00000509994 SMCPP49901 116 aaPredicted RBP6.9□□□□□ -1.3
SCARB2-204ENST00000509994 TDRG1Q3Y452 100 aa6.9□□□□□ -1.3
SCARB2-204ENST00000509994 ZNF876PQ49A33 203 aa6.9□□□□□ -1.3
SCARB2-204ENST00000509994 OR10J3Q5JRS4 329 aa6.9□□□□□ -1.3
SCARB2-204ENST00000509994 CDPF1Q6NVV7 123 aa6.9□□□□□ -1.3
SCARB2-204ENST00000509994 PRNTQ86SH4 94 aa6.9□□□□□ -1.3
SCARB2-204ENST00000509994 C10orf126Q8N4M7 172 aa6.9□□□□□ -1.3
SCARB2-204ENST00000509994 C5orf17Q8NAS9 161 aa6.9□□□□□ -1.3
SCARB2-204ENST00000509994 PRADC1Q9BSG0 188 aa6.9□□□□□ -1.3
SCARB2-204ENST00000509994 MED28Q9H204 178 aa6.9□□□□□ -1.3
SCARB2-204ENST00000509994 TRAV8-6A0A0B4J262 113 aa6.89□□□□□ -1.31
SCARB2-204ENST00000509994 SERTM2A0A1B0GWG4 89 aa6.89□□□□□ -1.31
SCARB2-204ENST00000509994 TAAR5O14804 337 aa6.89□□□□□ -1.31
SCARB2-204ENST00000509994 GCGP01275 180 aa6.89□□□□□ -1.31
SCARB2-204ENST00000509994 MBP02144 154 aa6.89□□□□□ -1.31
SCARB2-204ENST00000509994 GCHFRP30047 84 aa6.89□□□□□ -1.31
SCARB2-204ENST00000509994 RAB24Q969Q5 203 aa6.89□□□□□ -1.31
SCARB2-204ENST00000509994 Q9HAA7 133 aa6.89□□□□□ -1.31
SCARB2-204ENST00000509994 A0A087WTM6 91 aa6.88□□□□□ -1.31
SCARB2-204ENST00000509994 EPM2AB3EWF7 344 aa6.88□□□□□ -1.31
SCARB2-204ENST00000509994 K7EP13 123 aa6.88□□□□□ -1.31
SCARB2-204ENST00000509994 CXorf1O96002 111 aa6.88□□□□□ -1.31
SCARB2-204ENST00000509994 IFNA7P01567 189 aa6.88□□□□□ -1.31
SCARB2-204ENST00000509994 TCRAP04437 139 aa6.88□□□□□ -1.31
SCARB2-204ENST00000509994 PFN1P07737 140 aaKnown RBP6.88□□□□□ -1.31
SCARB2-204ENST00000509994 GATA1P15976 413 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-204ENST00000509994 S100A4P26447 101 aaKnown RBP6.88□□□□□ -1.31
SCARB2-204ENST00000509994 SMUG1Q53HV7 270 aa6.88□□□□□ -1.31
SCARB2-204ENST00000509994 ARL6IP6Q8N6S5 226 aa6.88□□□□□ -1.31
SCARB2-204ENST00000509994 INO80EQ8NBZ0 244 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-204ENST00000509994 TVP23CQ96ET8 276 aa6.88□□□□□ -1.31
SCARB2-204ENST00000509994 ACTR3CQ9C0K3 210 aaPredicted RBP6.88□□□□□ -1.31
SCARB2-204ENST00000509994 TMEM167BQ9NRX6 74 aa6.88□□□□□ -1.31
SCARB2-204ENST00000509994 PSG8Q9UQ74 426 aa6.88□□□□□ -1.31
SCARB2-204ENST00000509994 LRP1BQ9NZR2 4599 aa6.88□□□□□ -1.31
SCARB2-204ENST00000509994 FXYD6-FXYD2A0A087WZ82 144 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 BORCS7-ASMTA0A0B4J1R7 106 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 IGHV3-38A0A0C4DH36 116 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 IGHV3-30P01768 117 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 IGHV3-33P01772 117 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 STAG3L2P0CL84 134 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 STAG3L3P0CL85 134 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 IGHV3-30-3P0DP02 117 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 IGHV3-30-5P0DP03 117 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 ATP6V0CP27449 155 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 SUMO1P63165 101 aaKnown RBP6.87□□□□□ -1.31
SCARB2-204ENST00000509994 FLI1Q01543 452 aaPredicted RBP6.87□□□□□ -1.31
SCARB2-204ENST00000509994 RHOHQ15669 191 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 CYB561D1Q8N8Q1 229 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 TMEM75Q8N9X5 138 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 OR2G3Q8NGZ4 309 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 PSMG3Q9BT73 122 aaPredicted RBP6.87□□□□□ -1.31
SCARB2-204ENST00000509994 SH3BGRL3Q9H299 93 aa6.87□□□□□ -1.31
SCARB2-204ENST00000509994 IGLV5-52A0A0A0MRZ9 124 aa6.86□□□□□ -1.31
SCARB2-204ENST00000509994 ZNF80P51504 273 aaPredicted RBP6.86□□□□□ -1.31
SCARB2-204ENST00000509994 UBE2G2P60604 165 aa6.86□□□□□ -1.31
SCARB2-204ENST00000509994 SERF2P84101 59 aa6.86□□□□□ -1.31
SCARB2-204ENST00000509994 LGALSLQ3ZCW2 172 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms