RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TRAV4A0A0B4J268 109 aa10.48□□□□□ -0.73
TPM3-219ENST00000509409 A6NHS1 94 aa10.48□□□□□ -0.73
TPM3-219ENST00000509409 F6UZH7 168 aa10.48□□□□□ -0.73
TPM3-219ENST00000509409 M0R2P5 195 aa10.48□□□□□ -0.73
TPM3-219ENST00000509409 EVI2AP22794 236 aa10.48□□□□□ -0.73
TPM3-219ENST00000509409 FUSP35637 526 aaKnown RBP eCLIP10.48□□□□□ -0.73
TPM3-219ENST00000509409 RAB2AP61019 212 aa10.48□□□□□ -0.73
TPM3-219ENST00000509409 OR10G9Q8NGN4 311 aa10.48□□□□□ -0.73
TPM3-219ENST00000509409 OR10G7Q8NGN6 311 aa10.48□□□□□ -0.73
TPM3-219ENST00000509409 TRAV8-1A0A0A6YYK1 113 aa10.47□□□□□ -0.73
TPM3-219ENST00000509409 C9JCJ5 164 aa10.47□□□□□ -0.73
TPM3-219ENST00000509409 GNG5P63218 68 aa10.47□□□□□ -0.73
TPM3-219ENST00000509409 TDRG1Q3Y452 100 aa10.47□□□□□ -0.73
TPM3-219ENST00000509409 SDF2L1Q9HCN8 221 aa10.47□□□□□ -0.73
TPM3-219ENST00000509409 IGHV3-16A0A0C4DH30 117 aa10.46□□□□□ -0.73
TPM3-219ENST00000509409 WFDC10BQ8IUB3 73 aa10.46□□□□□ -0.73
TPM3-219ENST00000509409 ARL6IP6Q8N6S5 226 aa10.46□□□□□ -0.73
TPM3-219ENST00000509409 KCNS1Q96KK3 526 aa10.46□□□□□ -0.73
TPM3-219ENST00000509409 SGK494Q96LW2 274 aa10.46□□□□□ -0.73
TPM3-219ENST00000509409 NDFIP1Q9BT67 221 aa10.46□□□□□ -0.73
TPM3-219ENST00000509409 MSRB1Q9NZV6 116 aa10.46□□□□□ -0.73
TPM3-219ENST00000509409 TYMSP04818 313 aa10.45□□□□□ -0.74
TPM3-219ENST00000509409 NHLRC2Q8NBF2 726 aa10.45□□□□□ -0.74
TPM3-219ENST00000509409 ASB13Q8WXK3 278 aa10.45□□□□□ -0.74
TPM3-219ENST00000509409 TVP23CQ96ET8 276 aa10.45□□□□□ -0.74
TPM3-219ENST00000509409 LOC100131303A0A0U1RQF7 123 aa10.44□□□□□ -0.74
TPM3-219ENST00000509409 K7EP13 123 aa10.44□□□□□ -0.74
TPM3-219ENST00000509409 CRYGDP07320 174 aa10.44□□□□□ -0.74
TPM3-219ENST00000509409 ARL14EPLP0DKL9 152 aa10.44□□□□□ -0.74
TPM3-219ENST00000509409 CDC34P49427 236 aaPredicted RBP10.44□□□□□ -0.74
TPM3-219ENST00000509409 SH2D6Q7Z4S9 175 aa10.44□□□□□ -0.74
TPM3-219ENST00000509409 HSD17B11Q8NBQ5 300 aa10.44□□□□□ -0.74
TPM3-219ENST00000509409 A0A087WTM6 91 aa10.43□□□□□ -0.74
TPM3-219ENST00000509409 K7EQM0 130 aa10.43□□□□□ -0.74
TPM3-219ENST00000509409 DNAH10OSP0CZ25 163 aa10.43□□□□□ -0.74
TPM3-219ENST00000509409 PPT1P50897 306 aa10.43□□□□□ -0.74
TPM3-219ENST00000509409 CDPF1Q6NVV7 123 aa10.43□□□□□ -0.74
TPM3-219ENST00000509409 ALG5Q9Y673 324 aa10.43□□□□□ -0.74
TPM3-219ENST00000509409 SERTM2A0A1B0GWG4 89 aa10.42□□□□□ -0.74
TPM3-219ENST00000509409 FBLL1A6NHQ2 334 aaKnown RBP10.42□□□□□ -0.74
TPM3-219ENST00000509409 GATA1P15976 413 aaPredicted RBP10.42□□□□□ -0.74
TPM3-219ENST00000509409 ZNF876PQ49A33 203 aa10.42□□□□□ -0.74
TPM3-219ENST00000509409 C10orf126Q8N4M7 172 aa10.42□□□□□ -0.74
TPM3-219ENST00000509409 IGHV3-73A0A0B4J1V6 119 aa10.41□□□□□ -0.74
TPM3-219ENST00000509409 EPM2AB3EWF7 344 aa10.41□□□□□ -0.74
TPM3-219ENST00000509409 TAAR5O14804 337 aa10.41□□□□□ -0.74
TPM3-219ENST00000509409 MBP02144 154 aa10.41□□□□□ -0.74
TPM3-219ENST00000509409 PFN1P07737 140 aaKnown RBP10.41□□□□□ -0.74
TPM3-219ENST00000509409 STAG3L2P0CL84 134 aa10.41□□□□□ -0.74
TPM3-219ENST00000509409 STAG3L3P0CL85 134 aa10.41□□□□□ -0.74
TPM3-219ENST00000509409 GCHFRP30047 84 aa10.41□□□□□ -0.74
TPM3-219ENST00000509409 SUMO1P63165 101 aaKnown RBP10.41□□□□□ -0.74
TPM3-219ENST00000509409 C5orf17Q8NAS9 161 aa10.41□□□□□ -0.74
TPM3-219ENST00000509409 RAB24Q969Q5 203 aa10.41□□□□□ -0.74
TPM3-219ENST00000509409 PRADC1Q9BSG0 188 aa10.41□□□□□ -0.74
TPM3-219ENST00000509409 PSG8Q9UQ74 426 aa10.41□□□□□ -0.74
TPM3-219ENST00000509409 TRAV8-6A0A0B4J262 113 aa10.4□□□□□ -0.74
TPM3-219ENST00000509409 PSCAO43653 123 aa10.4□□□□□ -0.74
TPM3-219ENST00000509409 GCGP01275 180 aa10.4□□□□□ -0.74
TPM3-219ENST00000509409 TCRAP04437 139 aa10.4□□□□□ -0.74
TPM3-219ENST00000509409 ZNF80P51504 273 aaPredicted RBP10.4□□□□□ -0.74
TPM3-219ENST00000509409 SMUG1Q53HV7 270 aa10.4□□□□□ -0.74
TPM3-219ENST00000509409 PRNTQ86SH4 94 aa10.4□□□□□ -0.74
TPM3-219ENST00000509409 OR2G3Q8NGZ4 309 aa10.4□□□□□ -0.74
TPM3-219ENST00000509409 MED28Q9H204 178 aa10.4□□□□□ -0.74
TPM3-219ENST00000509409 IGHV3-38A0A0C4DH36 116 aa10.39□□□□□ -0.75
TPM3-219ENST00000509409 RS1O15537 224 aa10.39□□□□□ -0.75
TPM3-219ENST00000509409 CIDEAO60543 219 aa10.39□□□□□ -0.75
TPM3-219ENST00000509409 ATP6V0CP27449 155 aa10.39□□□□□ -0.75
TPM3-219ENST00000509409 ZFP69Q49AA0 526 aa10.39□□□□□ -0.75
TPM3-219ENST00000509409 OR10J3Q5JRS4 329 aa10.39□□□□□ -0.75
TPM3-219ENST00000509409 CFAP126Q5VTH2 177 aa10.39□□□□□ -0.75
TPM3-219ENST00000509409 SLC25A29Q8N8R3 303 aa10.39□□□□□ -0.75
TPM3-219ENST00000509409 PSMG3Q9BT73 122 aaPredicted RBP10.39□□□□□ -0.75
TPM3-219ENST00000509409 ACTR3CQ9C0K3 210 aaPredicted RBP10.39□□□□□ -0.75
TPM3-219ENST00000509409 TMEM167BQ9NRX6 74 aa10.39□□□□□ -0.75
TPM3-219ENST00000509409 EPDR1Q9UM22 224 aa10.39□□□□□ -0.75
TPM3-219ENST00000509409 CXorf1O96002 111 aa10.38□□□□□ -0.75
TPM3-219ENST00000509409 TIRAPP58753 221 aa10.38□□□□□ -0.75
TPM3-219ENST00000509409 SERF2P84101 59 aa10.38□□□□□ -0.75
TPM3-219ENST00000509409 FLI1Q01543 452 aaPredicted RBP10.38□□□□□ -0.75
TPM3-219ENST00000509409 RHOHQ15669 191 aa10.38□□□□□ -0.75
TPM3-219ENST00000509409 SUN5Q8TC36 379 aa10.38□□□□□ -0.75
TPM3-219ENST00000509409 AQP10Q96PS8 301 aa10.38□□□□□ -0.75
TPM3-219ENST00000509409 C11orf21Q9P2W6 132 aa10.38□□□□□ -0.75
TPM3-219ENST00000509409 GCSHP23434 173 aa10.37□□□□□ -0.75
TPM3-219ENST00000509409 XGP55808 180 aa10.37□□□□□ -0.75
TPM3-219ENST00000509409 KRTAP10-1P60331 282 aa10.37□□□□□ -0.75
TPM3-219ENST00000509409 DPPA3Q6W0C5 159 aa10.37□□□□□ -0.75
TPM3-219ENST00000509409 CYB561D1Q8N8Q1 229 aa10.37□□□□□ -0.75
TPM3-219ENST00000509409 TMEM75Q8N9X5 138 aa10.37□□□□□ -0.75
TPM3-219ENST00000509409 TRBV6-4A0A1B0GX49 114 aa10.36□□□□□ -0.75
TPM3-219ENST00000509409 PGPEP1LA6NFU8 196 aa10.36□□□□□ -0.75
TPM3-219ENST00000509409 S100A4P26447 101 aaKnown RBP10.36□□□□□ -0.75
TPM3-219ENST00000509409 LINC01556Q5JQF7 62 aa10.36□□□□□ -0.75
TPM3-219ENST00000509409 SAPCD1Q5SSQ6 148 aa10.36□□□□□ -0.75
TPM3-219ENST00000509409 INO80EQ8NBZ0 244 aaPredicted RBP10.36□□□□□ -0.75
TPM3-219ENST00000509409 SH3BGRL3Q9H299 93 aa10.36□□□□□ -0.75
TPM3-219ENST00000509409 Q9HAA7 133 aa10.36□□□□□ -0.75
TPM3-219ENST00000509409 TNFSF18Q9UNG2 199 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms