RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 TRGV11A0A075B6L2 103 aa10.64□□□□□ -0.71
CXCL1-202ENST00000509101 ZNF266Q14584 549 aa10.64□□□□□ -0.71
CXCL1-202ENST00000509101 SERTAD4-AS1Q5TG53 156 aa10.64□□□□□ -0.71
CXCL1-202ENST00000509101 Q6ZSA8 131 aa10.64□□□□□ -0.71
CXCL1-202ENST00000509101 PHYHIPLQ96FC7 376 aa10.64□□□□□ -0.71
CXCL1-202ENST00000509101 IGHV3-16A0A0C4DH30 117 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 TRBV7-9A0A0J9YWB2 115 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 IGHV3-30P01768 117 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 IGHV3-33P01772 117 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 OR10J4P0C629 311 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 NBEAP1P0C6P0 100 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 IGHV3-30-3P0DP02 117 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 IGHV3-30-5P0DP03 117 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 TIRAPP58753 221 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 WFDC2Q14508 124 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 OR10J3Q5JRS4 329 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 FAM159AQ6UWV7 190 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 MIR17HGQ75NE6 70 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 SH2D6Q7Z4S9 175 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 THAP6Q8TBB0 222 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 FAM167A-AS1Q96KT0 104 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 MBD2Q9UBB5 411 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 NAGKQ9UJ70 344 aa10.63□□□□□ -0.71
CXCL1-202ENST00000509101 TRAV8-6A0A0B4J262 113 aa10.62□□□□□ -0.71
CXCL1-202ENST00000509101 Q6AWC8 147 aa10.62□□□□□ -0.71
CXCL1-202ENST00000509101 CHAC2Q8WUX2 184 aa10.62□□□□□ -0.71
CXCL1-202ENST00000509101 NPCDR1Q9BY65 106 aa10.62□□□□□ -0.71
CXCL1-202ENST00000509101 GATA1P15976 413 aaPredicted RBP10.61□□□□□ -0.71
CXCL1-202ENST00000509101 MED28Q9H204 178 aa10.61□□□□□ -0.71
CXCL1-202ENST00000509101 OR51M1Q9H341 326 aa10.61□□□□□ -0.71
CXCL1-202ENST00000509101 HSPB11Q9Y547 144 aa10.61□□□□□ -0.71
CXCL1-202ENST00000509101 M0R2P5 195 aa10.6□□□□□ -0.71
CXCL1-202ENST00000509101 LECT2O14960 151 aa10.6□□□□□ -0.71
CXCL1-202ENST00000509101 RPL12P30050 165 aaKnown RBP10.6□□□□□ -0.71
CXCL1-202ENST00000509101 CSN1S1P47710 185 aa10.6□□□□□ -0.71
CXCL1-202ENST00000509101 RGS21Q2M5E4 152 aa10.6□□□□□ -0.71
CXCL1-202ENST00000509101 Q5BKY6 102 aa10.6□□□□□ -0.71
CXCL1-202ENST00000509101 FXYD5Q96DB9 178 aa10.6□□□□□ -0.71
CXCL1-202ENST00000509101 PAXXQ9BUH6 204 aa10.6□□□□□ -0.71
CXCL1-202ENST00000509101 SMIM3Q9BZL3 60 aa10.6□□□□□ -0.71
CXCL1-202ENST00000509101 WDR61Q9GZS3 305 aaKnown RBP10.6□□□□□ -0.71
CXCL1-202ENST00000509101 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.59□□□□□ -0.71
CXCL1-202ENST00000509101 RBAKDNA6NC62 111 aa10.59□□□□□ -0.71
CXCL1-202ENST00000509101 PET100P0DJ07 73 aa10.59□□□□□ -0.71
CXCL1-202ENST00000509101 WFDC1Q9HC57 220 aa10.59□□□□□ -0.71
CXCL1-202ENST00000509101 GNRH2O43555 120 aa10.58□□□□□ -0.72
CXCL1-202ENST00000509101 LAGE3Q14657 143 aa10.58□□□□□ -0.72
CXCL1-202ENST00000509101 LINC01620Q4KN68 170 aa10.58□□□□□ -0.72
CXCL1-202ENST00000509101 SCXQ7RTU7 201 aa10.58□□□□□ -0.72
CXCL1-202ENST00000509101 ATP5SQ99766 215 aa10.58□□□□□ -0.72
CXCL1-202ENST00000509101 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
CXCL1-202ENST00000509101 PLA2G2DQ9UNK4 145 aa10.58□□□□□ -0.72
CXCL1-202ENST00000509101 PKHD1L1Q86WI1 4243 aa10.57□□□□□ -0.72
CXCL1-202ENST00000509101 FBLL1A6NHQ2 334 aaKnown RBP10.57□□□□□ -0.72
CXCL1-202ENST00000509101 OR7C2O60412 319 aa10.57□□□□□ -0.72
CXCL1-202ENST00000509101 PFN1P07737 140 aaKnown RBP10.57□□□□□ -0.72
CXCL1-202ENST00000509101 RANP62826 216 aaKnown RBP10.57□□□□□ -0.72
CXCL1-202ENST00000509101 TDRG1Q3Y452 100 aa10.57□□□□□ -0.72
CXCL1-202ENST00000509101 LELP1Q5T871 98 aa10.57□□□□□ -0.72
CXCL1-202ENST00000509101 Q8N3U1 123 aa10.57□□□□□ -0.72
CXCL1-202ENST00000509101 SLC25A29Q8N8R3 303 aa10.57□□□□□ -0.72
CXCL1-202ENST00000509101 BOLA1Q9Y3E2 137 aa10.57□□□□□ -0.72
CXCL1-202ENST00000509101 LENEPQ9Y5L5 61 aa10.57□□□□□ -0.72
CXCL1-202ENST00000509101 TYMSP04818 313 aa10.56□□□□□ -0.72
CXCL1-202ENST00000509101 UBE2L3P68036 154 aaKnown RBP10.56□□□□□ -0.72
CXCL1-202ENST00000509101 PRADC1Q9BSG0 188 aa10.56□□□□□ -0.72
CXCL1-202ENST00000509101 DIRC3C9JPN6 131 aa10.55□□□□□ -0.72
CXCL1-202ENST00000509101 KRTAP10-4P60372 401 aaPredicted RBP10.55□□□□□ -0.72
CXCL1-202ENST00000509101 RHOHQ15669 191 aa10.55□□□□□ -0.72
CXCL1-202ENST00000509101 RPH3ALQ9UNE2 315 aa10.55□□□□□ -0.72
CXCL1-202ENST00000509101 IGHV3-73A0A0B4J1V6 119 aa10.54□□□□□ -0.72
CXCL1-202ENST00000509101 F6UZH7 168 aa10.54□□□□□ -0.72
CXCL1-202ENST00000509101 OXTP01178 125 aa10.54□□□□□ -0.72
CXCL1-202ENST00000509101 GIPP09681 153 aaPredicted RBP10.54□□□□□ -0.72
CXCL1-202ENST00000509101 HYLS1Q96M11 299 aa10.54□□□□□ -0.72
CXCL1-202ENST00000509101 SDF2L1Q9HCN8 221 aa10.54□□□□□ -0.72
CXCL1-202ENST00000509101 TRAV21A0A0B4J279 112 aa10.53□□□□□ -0.72
CXCL1-202ENST00000509101 TRBV6-4A0A1B0GX49 114 aa10.53□□□□□ -0.72
CXCL1-202ENST00000509101 GTSF1LQ9H1H1 148 aa10.53□□□□□ -0.72
CXCL1-202ENST00000509101 KCNIP2Q9NS61 270 aa10.53□□□□□ -0.72
CXCL1-202ENST00000509101 C17orf112F2Z3M2 114 aa10.52□□□□□ -0.73
CXCL1-202ENST00000509101 G3V3Q6 166 aa10.52□□□□□ -0.73
CXCL1-202ENST00000509101 EIF3GO75821 320 aaKnown RBP eCLIP10.52□□□□□ -0.73
CXCL1-202ENST00000509101 FFAR4Q5NUL3 377 aa10.52□□□□□ -0.73
CXCL1-202ENST00000509101 CFAP126Q5VTH2 177 aa10.52□□□□□ -0.73
CXCL1-202ENST00000509101 DPPA3Q6W0C5 159 aa10.52□□□□□ -0.73
CXCL1-202ENST00000509101 ATP6V0E2Q8NHE4 81 aa10.52□□□□□ -0.73
CXCL1-202ENST00000509101 SCGB1C1Q8TD33 95 aa10.52□□□□□ -0.73
CXCL1-202ENST00000509101 TMED6Q8WW62 240 aa10.52□□□□□ -0.73
CXCL1-202ENST00000509101 BAALCQ8WXS3 180 aa10.52□□□□□ -0.73
CXCL1-202ENST00000509101 TRAV8-3A0A0A6YYJ7 113 aa10.51□□□□□ -0.73
CXCL1-202ENST00000509101 RS1O15537 224 aa10.51□□□□□ -0.73
CXCL1-202ENST00000509101 ZNF876PQ49A33 203 aa10.51□□□□□ -0.73
CXCL1-202ENST00000509101 DAZ4Q86SG3 579 aaKnown RBP10.51□□□□□ -0.73
CXCL1-202ENST00000509101 ASB13Q8WXK3 278 aa10.51□□□□□ -0.73
CXCL1-202ENST00000509101 AQP10Q96PS8 301 aa10.51□□□□□ -0.73
CXCL1-202ENST00000509101 CHAC1Q9BUX1 264 aa10.51□□□□□ -0.73
CXCL1-202ENST00000509101 DAZ3Q9NR90 486 aaKnown RBP10.51□□□□□ -0.73
CXCL1-202ENST00000509101 RBFOX3A6NFN3 312 aa10.5□□□□□ -0.73
CXCL1-202ENST00000509101 GOLT1AQ6ZVE7 132 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms