RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 CDC42EP2O14613 210 aa0.39□□□□□ -2.35
GYPB-210ENST00000508841 S100GP29377 79 aa0.39□□□□□ -2.35
GYPB-210ENST00000508841 MED23Q9ULK4 1368 aa0.38□□□□□ -2.35
GYPB-210ENST00000508841 SDC4P31431 198 aa0.38□□□□□ -2.35
GYPB-210ENST00000508841 KLKP1Q107X0 134 aa0.38□□□□□ -2.35
GYPB-210ENST00000508841 Q5XG85 94 aa0.38□□□□□ -2.35
GYPB-210ENST00000508841 SMIM15Q7Z3B0 74 aa0.38□□□□□ -2.35
GYPB-210ENST00000508841 OTOSQ8NHW6 89 aa0.38□□□□□ -2.35
GYPB-210ENST00000508841 MEGF8Q7Z7M0 2845 aa0.37□□□□□ -2.35
GYPB-210ENST00000508841 RBBP6Q7Z6E9 1792 aaKnown RBP0.37□□□□□ -2.35
GYPB-210ENST00000508841 AHNAKQ09666 5890 aaKnown RBP0.37□□□□□ -2.35
GYPB-210ENST00000508841 PSPHP78330 225 aa0.37□□□□□ -2.35
GYPB-210ENST00000508841 IGKCP01834 107 aa0.36□□□□□ -2.35
GYPB-210ENST00000508841 IL7P13232 177 aa0.36□□□□□ -2.35
GYPB-210ENST00000508841 RPS28P62857 69 aaKnown RBP0.36□□□□□ -2.35
GYPB-210ENST00000508841 UNQ5815/PRO19632Q6UWF5 114 aa0.36□□□□□ -2.35
GYPB-210ENST00000508841 OR4S1Q8NGB4 309 aa0.36□□□□□ -2.35
GYPB-210ENST00000508841 ESPL1Q14674 2120 aa0.35□□□□□ -2.35
GYPB-210ENST00000508841 HIST1H1BP16401 226 aaKnown RBP0.35□□□□□ -2.35
GYPB-210ENST00000508841 ADCYAP1P18509 176 aa0.35□□□□□ -2.35
GYPB-210ENST00000508841 TMEM14BQ9NUH8 114 aa0.35□□□□□ -2.35
GYPB-210ENST00000508841 PTPRGP23470 1445 aa0.35□□□□□ -2.35
GYPB-210ENST00000508841 CDK12Q9NYV4 1490 aaPredicted RBP0.35□□□□□ -2.35
GYPB-210ENST00000508841 DLEC1Q9Y238 1755 aa0.34□□□□□ -2.35
GYPB-210ENST00000508841 GPR98Q8WXG9 6306 aa0.34□□□□□ -2.35
GYPB-210ENST00000508841 SPAG17Q6Q759 2223 aa0.34□□□□□ -2.35
GYPB-210ENST00000508841 TSTD3H0UI37 97 aa0.34□□□□□ -2.36
GYPB-210ENST00000508841 PCBD1P61457 104 aa0.34□□□□□ -2.36
GYPB-210ENST00000508841 SELENOSQ9BQE4 189 aa0.34□□□□□ -2.36
GYPB-210ENST00000508841 WDR97A6NE52 1622 aa0.34□□□□□ -2.36
GYPB-210ENST00000508841 BLMP54132 1417 aaPredicted RBP0.33□□□□□ -2.36
GYPB-210ENST00000508841 KIDINS220Q9ULH0 1771 aa0.33□□□□□ -2.36
GYPB-210ENST00000508841 SLC25A5P05141 298 aaKnown RBP0.33□□□□□ -2.36
GYPB-210ENST00000508841 CCKP06307 115 aa0.33□□□□□ -2.36
GYPB-210ENST00000508841 POLR2JP52435 117 aaKnown RBP0.33□□□□□ -2.36
GYPB-210ENST00000508841 VPS25Q9BRG1 176 aa0.33□□□□□ -2.36
GYPB-210ENST00000508841 METTL1Q9UBP6 276 aaKnown RBP0.33□□□□□ -2.36
GYPB-210ENST00000508841 FAT4Q6V0I7 4981 aa0.33□□□□□ -2.36
GYPB-210ENST00000508841 MAST4O15021 2626 aa0.33□□□□□ -2.36
GYPB-210ENST00000508841 A0A096LNT2 108 aa0.32□□□□□ -2.36
GYPB-210ENST00000508841 TRBV10-1A0A0K0K1A3 114 aa0.32□□□□□ -2.36
GYPB-210ENST00000508841 MCRIP1C9JLW8 97 aa0.32□□□□□ -2.36
GYPB-210ENST00000508841 DPM2O94777 84 aa0.32□□□□□ -2.36
GYPB-210ENST00000508841 PPP1R1CQ8WVI7 109 aa0.32□□□□□ -2.36
GYPB-210ENST00000508841 HSPB11Q9Y547 144 aa0.32□□□□□ -2.36
GYPB-210ENST00000508841 ZCCHC6Q5VYS8 1495 aaKnown RBP0.32□□□□□ -2.36
GYPB-210ENST00000508841 RREB1Q92766 1687 aa0.32□□□□□ -2.36
GYPB-210ENST00000508841 BDP1A6H8Y1 2624 aa0.32□□□□□ -2.36
GYPB-210ENST00000508841 J3KT08 172 aa0.31□□□□□ -2.36
GYPB-210ENST00000508841 PLGLB1Q02325 96 aa0.31□□□□□ -2.36
GYPB-210ENST00000508841 IQCJQ1A5X6 159 aa0.31□□□□□ -2.36
GYPB-210ENST00000508841 OR8I2Q8N0Y5 310 aa0.31□□□□□ -2.36
GYPB-210ENST00000508841 XIRP1Q702N8 1843 aaKnown RBP0.31□□□□□ -2.36
GYPB-210ENST00000508841 OVOS2A0A0G2JMS6 1433 aa0.3□□□□□ -2.36
GYPB-210ENST00000508841 TEX49A0A1B0GTD5 131 aa0.3□□□□□ -2.36
GYPB-210ENST00000508841 APOC1P02654 83 aa0.3□□□□□ -2.36
GYPB-210ENST00000508841 TCRAP04437 139 aa0.3□□□□□ -2.36
GYPB-210ENST00000508841 HSD17B12Q53GQ0 312 aa0.3□□□□□ -2.36
GYPB-210ENST00000508841 PPDPFLQ8WWR9 84 aa0.3□□□□□ -2.36
GYPB-210ENST00000508841 SPANXCQ9NY87 97 aa0.3□□□□□ -2.36
GYPB-210ENST00000508841 HELZP42694 1942 aaKnown RBP0.29□□□□□ -2.36
GYPB-210ENST00000508841 SPANXA1Q9NS26 97 aa0.29□□□□□ -2.36
GYPB-210ENST00000508841 MAP2P11137 1827 aaKnown RBP0.29□□□□□ -2.36
GYPB-210ENST00000508841 TRAV2A0A0B4J234 112 aa0.28□□□□□ -2.36
GYPB-210ENST00000508841 DSCR8Q96T75 97 aa0.28□□□□□ -2.36
GYPB-210ENST00000508841 COA4Q9NYJ1 87 aa0.28□□□□□ -2.36
GYPB-210ENST00000508841 CALML5Q9NZT1 146 aa0.28□□□□□ -2.36
GYPB-210ENST00000508841 GINS2Q9Y248 185 aa0.28□□□□□ -2.36
GYPB-210ENST00000508841 TANC1Q9C0D5 1861 aa0.28□□□□□ -2.36
GYPB-210ENST00000508841 MUC5ACP98088 5654 aa0.28□□□□□ -2.36
GYPB-210ENST00000508841 CPDO75976 1380 aa0.28□□□□□ -2.36
GYPB-210ENST00000508841 SYNE1Q8NF91 8797 aaKnown RBP0.27□□□□□ -2.37
GYPB-210ENST00000508841 OR2H2O95918 312 aa0.27□□□□□ -2.37
GYPB-210ENST00000508841 CD3DP04234 171 aa0.27□□□□□ -2.37
GYPB-210ENST00000508841 MAGOHBQ96A72 148 aaKnown RBP0.27□□□□□ -2.37
GYPB-210ENST00000508841 TAS2R8Q9NYW2 309 aa0.27□□□□□ -2.37
GYPB-210ENST00000508841 NDUFAF1Q9Y375 327 aa0.27□□□□□ -2.37
GYPB-210ENST00000508841 A0A1B0GX51 115 aa0.26□□□□□ -2.37
GYPB-210ENST00000508841 PAEPP09466 180 aa0.26□□□□□ -2.37
GYPB-210ENST00000508841 SLC35B3Q9H1N7 401 aa0.26□□□□□ -2.37
GYPB-210ENST00000508841 LRP5O75197 1615 aa0.26□□□□□ -2.37
GYPB-210ENST00000508841 KDM6BO15054 1643 aa0.25□□□□□ -2.37
GYPB-210ENST00000508841 ARHGAP31Q2M1Z3 1444 aa0.25□□□□□ -2.37
GYPB-210ENST00000508841 TRAV12-2A0A075B6T6 113 aa0.25□□□□□ -2.37
GYPB-210ENST00000508841 TRAV36DV7A0A075B6V5 113 aa0.25□□□□□ -2.37
GYPB-210ENST00000508841 MPC1LP0DKB6 136 aa0.25□□□□□ -2.37
GYPB-210ENST00000508841 VMO1Q7Z5L0 202 aa0.25□□□□□ -2.37
GYPB-210ENST00000508841 SMIM24O75264 130 aa0.24□□□□□ -2.37
GYPB-210ENST00000508841 TMEM91Q6ZNR0 172 aa0.24□□□□□ -2.37
GYPB-210ENST00000508841 SLC25A26Q70HW3 274 aa0.24□□□□□ -2.37
GYPB-210ENST00000508841 TPRP12270 2363 aaKnown RBP0.24□□□□□ -2.37
GYPB-210ENST00000508841 SCTP09683 121 aa0.23□□□□□ -2.37
GYPB-210ENST00000508841 AKR1D1P51857 326 aa0.23□□□□□ -2.37
GYPB-210ENST00000508841 TMEM141Q96I45 108 aa0.23□□□□□ -2.37
GYPB-210ENST00000508841 PROK2Q9HC23 129 aa0.23□□□□□ -2.37
GYPB-210ENST00000508841 BET1LQ9NYM9 111 aa0.23□□□□□ -2.37
GYPB-210ENST00000508841 CXorf51AA0A1B0GTR3 108 aa0.22□□□□□ -2.37
GYPB-210ENST00000508841 GNG14A0A1W2PPG7 69 aa0.22□□□□□ -2.37
GYPB-210ENST00000508841 YPEL1O60688 119 aa0.22□□□□□ -2.37
GYPB-210ENST00000508841 PLXNA2O75051 1894 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms