RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 EIF3GO75821 320 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 CA1P00915 261 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 PRSS2P07478 247 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 BCL2P10415 239 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 VPREB1P12018 145 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 RPL35AP18077 110 aaKnown RBP3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 ZNF138P52744 262 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 TAS2R60P59551 318 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 UBE2G2P60604 165 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 MEF2BQ02080 365 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 NDUFA5Q16718 116 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 GDF5OSQ5U4N7 250 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 AMTNQ6UX39 209 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 GOLT1AQ6ZVE7 132 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 TMEM256Q8N2U0 113 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 C11orf52Q96A22 123 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 SMIM12Q96EX1 92 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 FMC1Q96HJ9 113 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 FAM19A4Q96LR4 140 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 IGF2BP2-AS1Q96M15 143 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 RCHY1Q96PM5 261 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 TM2D3Q9BRN9 247 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 NDFIP1Q9BT67 221 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 AGPAT4-IT1Q9H0P7 198 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 ZFP30Q9Y2G7 519 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 KLF12Q9Y4X4 402 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 YTHDF2Q9Y5A9 579 aaKnown RBP3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 IGKV2D-30A0A075B6S6 120 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 A0A1B0GV50 99 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 RBFOX3A6NFN3 312 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 KLLNB2CW77 178 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 TMEM250H0YL14 139 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 INSP01308 110 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 CT45A10P0DMU9 189 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 AKR1C3P42330 323 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 UBE2G1P62253 170 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 CCL20P78556 96 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 FLI1Q01543 452 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 GAGE2BQ13066 116 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 PEA15Q15121 130 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 TMEM183BQ1AE95 376 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 GAGE2EQ4V326 116 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 ZNF506Q5JVG8 444 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 CLLU1Q5K131 121 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 GAGE2AQ6NT46 116 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 COX8CQ7Z4L0 72 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 SBSPONQ8IVN8 264 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 CSNK1G2-AS1Q8NCQ2 148 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 VGLL1Q99990 258 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 GAGE2DQ9UEU5 116 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 PSG8Q9UQ74 426 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 GOLT1BQ9Y3E0 138 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 STAB2Q8WWQ8 2551 aa3.98□□□□□ -1.77
HMGB1P44-201ENST00000508597 IGKV2-40A0A087WW87 121 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 C7orf71A4D174 169 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 RAB19A4D1S5 217 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 TMEM189A5PLL7 270 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 H7BYZ3 331 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 CRXO43186 299 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 IGKV2D-40P01614 121 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 IGKV3-20P01619 116 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 GPX1P07203 203 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 GIG44P09565 113 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 ZNF705DP0CH99 300 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 ZNF705BP0CI00 300 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 MIFP14174 115 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 S100A1P23297 94 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 ATP5G3P48201 142 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 DEFB1P60022 68 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 GNG5P63218 68 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 ERCC8Q13216 396 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 SMUG1Q53HV7 270 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 Q6AWC8 147 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 ZNF705AQ6ZN79 300 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 Q75L30 129 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 ASCL2Q99929 193 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 PYGO2Q9BRQ0 406 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 LINC00467Q9BRT7 94 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 NIPSNAP3BQ9BS92 247 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 EIF5A2Q9GZV4 153 aaKnown RBP3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 SLC35B3Q9H1N7 401 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 TREM1Q9NP99 234 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 BIN3Q9NQY0 253 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 MED9Q9NWA0 146 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 XCL2Q9UBD3 114 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 RPH3ALQ9UNE2 315 aa3.97□□□□□ -1.77
HMGB1P44-201ENST00000508597 TRAV21A0A0B4J279 112 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 TEX48A0A1B0GUV7 120 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 FABP5P3A8MUU1 101 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 M0R2Z0 102 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 LTAP01374 205 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 IGLV2-11P01706 119 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 IFITM2Q01629 132 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 SPINK13Q1W4C9 94 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 DEFB135Q30KP9 77 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 FAM74A3Q4VXF1 159 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 ZNF493Q6ZR52 646 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 PRNTQ86SH4 94 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 TMEM183AQ8IXX5 376 aa3.96□□□□□ -1.78
HMGB1P44-201ENST00000508597 ZFAND2AQ8N6M9 145 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms