RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 SRIP30626 198 aa8.85□□□□□ -0.99
HMGCS1-205ENST00000508319 GNG5P63218 68 aa8.85□□□□□ -0.99
HMGCS1-205ENST00000508319 Q8N1X5 172 aa8.85□□□□□ -0.99
HMGCS1-205ENST00000508319 ARL6IP6Q8N6S5 226 aa8.85□□□□□ -0.99
HMGCS1-205ENST00000508319 TVP23CQ96ET8 276 aa8.85□□□□□ -0.99
HMGCS1-205ENST00000508319 TRAV4A0A0B4J268 109 aa8.84□□□□□ -0.99
HMGCS1-205ENST00000508319 A0A1W2PPV4 95 aa8.84□□□□□ -0.99
HMGCS1-205ENST00000508319 GNRH2O43555 120 aa8.84□□□□□ -0.99
HMGCS1-205ENST00000508319 TYMSP04818 313 aa8.84□□□□□ -0.99
HMGCS1-205ENST00000508319 ARL14EPLP0DKL9 152 aa8.84□□□□□ -0.99
HMGCS1-205ENST00000508319 GYPEP15421 78 aa8.84□□□□□ -0.99
HMGCS1-205ENST00000508319 FAM74A1Q5RGS3 127 aa8.84□□□□□ -0.99
HMGCS1-205ENST00000508319 WFDC10BQ8IUB3 73 aa8.84□□□□□ -0.99
HMGCS1-205ENST00000508319 TREM1Q9NP99 234 aa8.84□□□□□ -0.99
HMGCS1-205ENST00000508319 TNFRSF18Q9Y5U5 241 aa8.84□□□□□ -0.99
HMGCS1-205ENST00000508319 TRAV21A0A0B4J279 112 aa8.83□□□□□ -1
HMGCS1-205ENST00000508319 M0R2P5 195 aa8.83□□□□□ -1
HMGCS1-205ENST00000508319 ORM1P02763 201 aa8.83□□□□□ -1
HMGCS1-205ENST00000508319 OR10G9Q8NGN4 311 aa8.83□□□□□ -1
HMGCS1-205ENST00000508319 OR10G7Q8NGN6 311 aa8.83□□□□□ -1
HMGCS1-205ENST00000508319 OR2G3Q8NGZ4 309 aa8.83□□□□□ -1
HMGCS1-205ENST00000508319 PCNPQ8WW12 178 aaKnown RBP8.83□□□□□ -1
HMGCS1-205ENST00000508319 ALG5Q9Y673 324 aa8.83□□□□□ -1
HMGCS1-205ENST00000508319 LY96Q9Y6Y9 160 aa8.83□□□□□ -1
HMGCS1-205ENST00000508319 C9JCJ5 164 aa8.82□□□□□ -1
HMGCS1-205ENST00000508319 STAG3L2P0CL84 134 aa8.82□□□□□ -1
HMGCS1-205ENST00000508319 STAG3L3P0CL85 134 aa8.82□□□□□ -1
HMGCS1-205ENST00000508319 CDC34P49427 236 aaPredicted RBP8.82□□□□□ -1
HMGCS1-205ENST00000508319 ERVFC1-1P60608 527 aa8.82□□□□□ -1
HMGCS1-205ENST00000508319 OR4C5Q8NGB2 326 aa8.82□□□□□ -1
HMGCS1-205ENST00000508319 SDF2L1Q9HCN8 221 aa8.82□□□□□ -1
HMGCS1-205ENST00000508319 FAT1Q14517 4588 aa8.81□□□□□ -1
HMGCS1-205ENST00000508319 LOC100131303A0A0U1RQF7 123 aa8.81□□□□□ -1
HMGCS1-205ENST00000508319 DNAH10OSP0CZ25 163 aa8.81□□□□□ -1
HMGCS1-205ENST00000508319 FUSP35637 526 aaKnown RBP eCLIP8.81□□□□□ -1
HMGCS1-205ENST00000508319 NFE4Q86UQ8 179 aa8.81□□□□□ -1
HMGCS1-205ENST00000508319 C5orf17Q8NAS9 161 aa8.81□□□□□ -1
HMGCS1-205ENST00000508319 HSD17B11Q8NBQ5 300 aa8.81□□□□□ -1
HMGCS1-205ENST00000508319 SUN5Q8TC36 379 aa8.81□□□□□ -1
HMGCS1-205ENST00000508319 ASB13Q8WXK3 278 aa8.81□□□□□ -1
HMGCS1-205ENST00000508319 SGK494Q96LW2 274 aa8.81□□□□□ -1
HMGCS1-205ENST00000508319 PSMG3Q9BT73 122 aaPredicted RBP8.81□□□□□ -1
HMGCS1-205ENST00000508319 SCRT2Q9NQ03 307 aa8.81□□□□□ -1
HMGCS1-205ENST00000508319 SERTM2A0A1B0GWG4 89 aa8.8□□□□□ -1
HMGCS1-205ENST00000508319 K7EP13 123 aa8.8□□□□□ -1
HMGCS1-205ENST00000508319 IGLV2-11P01706 119 aa8.8□□□□□ -1
HMGCS1-205ENST00000508319 TCRAP04437 139 aa8.8□□□□□ -1
HMGCS1-205ENST00000508319 GATA1P15976 413 aaPredicted RBP8.8□□□□□ -1
HMGCS1-205ENST00000508319 ATP6V0CP27449 155 aa8.8□□□□□ -1
HMGCS1-205ENST00000508319 ZNF80P51504 273 aaPredicted RBP8.8□□□□□ -1
HMGCS1-205ENST00000508319 CDPF1Q6NVV7 123 aa8.8□□□□□ -1
HMGCS1-205ENST00000508319 RAB24Q969Q5 203 aa8.8□□□□□ -1
HMGCS1-205ENST00000508319 KCNS1Q96KK3 526 aa8.8□□□□□ -1
HMGCS1-205ENST00000508319 AQP10Q96PS8 301 aa8.8□□□□□ -1
HMGCS1-205ENST00000508319 TXNDC17Q9BRA2 123 aa8.8□□□□□ -1
HMGCS1-205ENST00000508319 MSRB1Q9NZV6 116 aa8.8□□□□□ -1
HMGCS1-205ENST00000508319 C11orf21Q9P2W6 132 aa8.8□□□□□ -1
HMGCS1-205ENST00000508319 TRAV9-2A0A087WT02 112 aa8.79□□□□□ -1
HMGCS1-205ENST00000508319 A0A087WTM6 91 aa8.79□□□□□ -1
HMGCS1-205ENST00000508319 GGTLC3B5MD39 225 aa8.79□□□□□ -1
HMGCS1-205ENST00000508319 EVI2AP22794 236 aa8.79□□□□□ -1
HMGCS1-205ENST00000508319 GCHFRP30047 84 aa8.79□□□□□ -1
HMGCS1-205ENST00000508319 NDFIP1Q9BT67 221 aa8.79□□□□□ -1
HMGCS1-205ENST00000508319 PTTG1O95997 202 aa8.78□□□□□ -1
HMGCS1-205ENST00000508319 CRYGDP07320 174 aa8.78□□□□□ -1
HMGCS1-205ENST00000508319 LORP23490 312 aaPredicted RBP8.78□□□□□ -1
HMGCS1-205ENST00000508319 TIRAPP58753 221 aa8.78□□□□□ -1
HMGCS1-205ENST00000508319 DPPA3Q6W0C5 159 aa8.78□□□□□ -1
HMGCS1-205ENST00000508319 TMEM75Q8N9X5 138 aa8.78□□□□□ -1
HMGCS1-205ENST00000508319 SH3BGRL3Q9H299 93 aa8.78□□□□□ -1
HMGCS1-205ENST00000508319 FBLL1A6NHQ2 334 aaKnown RBP8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 GCGP01275 180 aa8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 PFN1P07737 140 aaKnown RBP8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 SERF2P84101 59 aa8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 ZNF876PQ49A33 203 aa8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 Q5BKY6 102 aa8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 CFAP126Q5VTH2 177 aa8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 SH2D6Q7Z4S9 175 aa8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 C10orf126Q8N4M7 172 aa8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 SLC25A29Q8N8R3 303 aa8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 NHLRC2Q8NBF2 726 aa8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 C9orf85Q96MD7 179 aa8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 MED28Q9H204 178 aa8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 PSG8Q9UQ74 426 aa8.77□□□□□ -1.01
HMGCS1-205ENST00000508319 K7EQM0 130 aa8.76□□□□□ -1.01
HMGCS1-205ENST00000508319 RS1O15537 224 aa8.76□□□□□ -1.01
HMGCS1-205ENST00000508319 MBP02144 154 aa8.76□□□□□ -1.01
HMGCS1-205ENST00000508319 PPT1P50897 306 aa8.76□□□□□ -1.01
HMGCS1-205ENST00000508319 FLI1Q01543 452 aaPredicted RBP8.76□□□□□ -1.01
HMGCS1-205ENST00000508319 CYB561D1Q8N8Q1 229 aa8.76□□□□□ -1.01
HMGCS1-205ENST00000508319 TMEM167BQ9NRX6 74 aa8.76□□□□□ -1.01
HMGCS1-205ENST00000508319 EPDR1Q9UM22 224 aa8.76□□□□□ -1.01
HMGCS1-205ENST00000508319 IGHV3-38A0A0C4DH36 116 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 TRBV6-4A0A1B0GX49 114 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 RNF222A6NCQ9 220 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 TAAR5O14804 337 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 CXorf1O96002 111 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 RNASE3P12724 160 aaKnown RBP8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 XGP55808 180 aa8.75□□□□□ -1.01
HMGCS1-205ENST00000508319 KRTAP10-1P60331 282 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms