RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TMEM190Q8WZ59 177 aa11.04□□□□□ -0.64
DDX41-208ENST00000507955 NF1P21359 2839 aa11.04□□□□□ -0.64
DDX41-208ENST00000507955 TMEM78Q5T7P6 136 aa11.04□□□□□ -0.64
DDX41-208ENST00000507955 TGFAP01135 160 aa11.03□□□□□ -0.64
DDX41-208ENST00000507955 WFDC3Q8IUB2 231 aa11.03□□□□□ -0.64
DDX41-208ENST00000507955 TMEM8BA6NDV4 472 aa11.03□□□□□ -0.64
DDX41-208ENST00000507955 EVI2AP22794 236 aa11.03□□□□□ -0.64
DDX41-208ENST00000507955 S100A7P31151 101 aa11.03□□□□□ -0.64
DDX41-208ENST00000507955 CKS2P33552 79 aa11.03□□□□□ -0.64
DDX41-208ENST00000507955 CRIP2P52943 208 aaPredicted RBP11.03□□□□□ -0.64
DDX41-208ENST00000507955 CACNG7P62955 275 aa11.03□□□□□ -0.64
DDX41-208ENST00000507955 CCDC168Q8NDH2 2452 aa11.02□□□□□ -0.64
DDX41-208ENST00000507955 AMMECR1LQ6DCA0 310 aa11.02□□□□□ -0.65
DDX41-208ENST00000507955 WFDC12Q8WWY7 111 aa11.02□□□□□ -0.65
DDX41-208ENST00000507955 SPOCK3Q9BQ16 436 aa11.02□□□□□ -0.65
DDX41-208ENST00000507955 TRAV8-6A0A0B4J262 113 aa11.02□□□□□ -0.65
DDX41-208ENST00000507955 RNF223E7ERA6 249 aa11.02□□□□□ -0.65
DDX41-208ENST00000507955 ARL6IP6Q8N6S5 226 aa11.02□□□□□ -0.65
DDX41-208ENST00000507955 RNF185Q96GF1 192 aa11.01□□□□□ -0.65
DDX41-208ENST00000507955 TENM4Q6N022 2769 aa11.01□□□□□ -0.65
DDX41-208ENST00000507955 PCP4P48539 62 aa11.01□□□□□ -0.65
DDX41-208ENST00000507955 TRAV26-2A0A0B4J265 109 aa11□□□□□ -0.65
DDX41-208ENST00000507955 RBAKDNA6NC62 111 aa11□□□□□ -0.65
DDX41-208ENST00000507955 CD5LO43866 347 aa11□□□□□ -0.65
DDX41-208ENST00000507955 LINC01559Q495D7 138 aa11□□□□□ -0.65
DDX41-208ENST00000507955 NPFFR1Q9GZQ6 430 aa11□□□□□ -0.65
DDX41-208ENST00000507955 NDUFA4O00483 81 aa11□□□□□ -0.65
DDX41-208ENST00000507955 LGALS9BQ3B8N2 356 aa11□□□□□ -0.65
DDX41-208ENST00000507955 LGALS9CQ6DKI2 356 aa11□□□□□ -0.65
DDX41-208ENST00000507955 FBLL1A6NHQ2 334 aaKnown RBP10.99□□□□□ -0.65
DDX41-208ENST00000507955 IGLV1-40P01703 118 aa10.99□□□□□ -0.65
DDX41-208ENST00000507955 HBDP02042 147 aa10.99□□□□□ -0.65
DDX41-208ENST00000507955 DUX5Q96PT3 197 aa10.99□□□□□ -0.65
DDX41-208ENST00000507955 RHPN1-AS1Q9BWJ2 59 aa10.99□□□□□ -0.65
DDX41-208ENST00000507955 A0A096LNT2 108 aa10.99□□□□□ -0.65
DDX41-208ENST00000507955 RPS20P60866 119 aaKnown RBP10.99□□□□□ -0.65
DDX41-208ENST00000507955 HIST2H2BDQ6DRA6 164 aa10.99□□□□□ -0.65
DDX41-208ENST00000507955 C9orf47Q6ZRZ4 202 aa10.99□□□□□ -0.65
DDX41-208ENST00000507955 ZNF843Q8N446 348 aa10.99□□□□□ -0.65
DDX41-208ENST00000507955 IGHV7-4-1A0A0J9YVY3 117 aa10.98□□□□□ -0.65
DDX41-208ENST00000507955 TMEM97Q5BJF2 176 aa10.98□□□□□ -0.65
DDX41-208ENST00000507955 SETD2Q9BYW2 2564 aaPredicted RBP10.98□□□□□ -0.65
DDX41-208ENST00000507955 IFI27L1Q96BM0 104 aa10.98□□□□□ -0.65
DDX41-208ENST00000507955 USMG5Q96IX5 58 aa10.98□□□□□ -0.65
DDX41-208ENST00000507955 DKK2Q9UBU2 259 aa10.98□□□□□ -0.65
DDX41-208ENST00000507955 CHD6Q8TD26 2715 aa10.98□□□□□ -0.65
DDX41-208ENST00000507955 C7orf71A4D174 169 aa10.97□□□□□ -0.65
DDX41-208ENST00000507955 H3BVH4 76 aa10.97□□□□□ -0.65
DDX41-208ENST00000507955 SOCS3O14543 225 aa10.97□□□□□ -0.65
DDX41-208ENST00000507955 COX6B1P14854 86 aa10.97□□□□□ -0.65
DDX41-208ENST00000507955 BOD1L2Q8IYS8 172 aa10.97□□□□□ -0.65
DDX41-208ENST00000507955 LINC01356Q8N9X3 169 aa10.97□□□□□ -0.65
DDX41-208ENST00000507955 C18orf15Q96N68 181 aa10.97□□□□□ -0.65
DDX41-208ENST00000507955 UFC1Q9Y3C8 167 aa10.97□□□□□ -0.65
DDX41-208ENST00000507955 PRRC2AP48634 2157 aaKnown RBP10.97□□□□□ -0.65
DDX41-208ENST00000507955 CFHR3Q02985 330 aa10.97□□□□□ -0.65
DDX41-208ENST00000507955 PCP2Q8IVA1 136 aa10.97□□□□□ -0.65
DDX41-208ENST00000507955 DPF1Q92782 380 aa10.97□□□□□ -0.65
DDX41-208ENST00000507955 ITPR3Q14573 2671 aa10.96□□□□□ -0.65
DDX41-208ENST00000507955 C9orf139Q6ZV77 190 aa10.96□□□□□ -0.66
DDX41-208ENST00000507955 CNFNQ9BYD5 112 aa10.96□□□□□ -0.66
DDX41-208ENST00000507955 AGRNO00468 2067 aa10.96□□□□□ -0.66
DDX41-208ENST00000507955 CDKN1BP46527 198 aa10.95□□□□□ -0.66
DDX41-208ENST00000507955 ZFAND2AQ8N6M9 145 aa10.95□□□□□ -0.66
DDX41-208ENST00000507955 BEX4Q9NWD9 120 aaPredicted RBP10.95□□□□□ -0.66
DDX41-208ENST00000507955 TNFRSF6BO95407 300 aa10.95□□□□□ -0.66
DDX41-208ENST00000507955 RNASE4P34096 147 aaKnown RBP10.95□□□□□ -0.66
DDX41-208ENST00000507955 RNF151Q2KHN1 245 aa10.95□□□□□ -0.66
DDX41-208ENST00000507955 JMJD8Q96S16 334 aa10.95□□□□□ -0.66
DDX41-208ENST00000507955 NAA38Q9BRA0 125 aaKnown RBP10.95□□□□□ -0.66
DDX41-208ENST00000507955 CST9LQ9H4G1 147 aa10.95□□□□□ -0.66
DDX41-208ENST00000507955 NIPBLQ6KC79 2804 aaeCLIP10.95□□□□□ -0.66
DDX41-208ENST00000507955 SLC25A16P16260 332 aa10.94□□□□□ -0.66
DDX41-208ENST00000507955 OR1N2Q8NGR9 330 aa10.94□□□□□ -0.66
DDX41-208ENST00000507955 DAZ1Q9NQZ3 744 aaKnown RBP10.94□□□□□ -0.66
DDX41-208ENST00000507955 PEF1Q9UBV8 284 aaKnown RBP10.94□□□□□ -0.66
DDX41-208ENST00000507955 AKAP9Q99996 3911 aa10.94□□□□□ -0.66
DDX41-208ENST00000507955 PSMB8P28062 276 aa10.94□□□□□ -0.66
DDX41-208ENST00000507955 SRSF2Q01130 221 aaKnown RBP10.94□□□□□ -0.66
DDX41-208ENST00000507955 SPANXN1Q5VSR9 72 aa10.94□□□□□ -0.66
DDX41-208ENST00000507955 ADAMTSL5Q6ZMM2 481 aa10.94□□□□□ -0.66
DDX41-208ENST00000507955 MRPL53Q96EL3 112 aaKnown RBP10.94□□□□□ -0.66
DDX41-208ENST00000507955 A0A0G2JLM5 398 aa10.93□□□□□ -0.66
DDX41-208ENST00000507955 M0R381 172 aa10.93□□□□□ -0.66
DDX41-208ENST00000507955 GNRH2O43555 120 aa10.93□□□□□ -0.66
DDX41-208ENST00000507955 NMUP48645 174 aa10.93□□□□□ -0.66
DDX41-208ENST00000507955 OR10J6PQ8NGY7 276 aa10.93□□□□□ -0.66
DDX41-208ENST00000507955 TTTY13Q9BZ97 58 aa10.93□□□□□ -0.66
DDX41-208ENST00000507955 CR1P17927 2039 aa10.93□□□□□ -0.66
DDX41-208ENST00000507955 H3BUA1 57 aa10.93□□□□□ -0.66
DDX41-208ENST00000507955 LEPP41159 167 aa10.93□□□□□ -0.66
DDX41-208ENST00000507955 SEC11AP67812 179 aa10.93□□□□□ -0.66
DDX41-208ENST00000507955 ATP6V0BQ99437 205 aa10.93□□□□□ -0.66
DDX41-208ENST00000507955 MAP1LC3AQ9H492 121 aa10.93□□□□□ -0.66
DDX41-208ENST00000507955 IGKV2D-26A0A0A0MRZ7 120 aa10.92□□□□□ -0.66
DDX41-208ENST00000507955 LINC01546A6NGU7 62 aa10.92□□□□□ -0.66
DDX41-208ENST00000507955 IGKV3-20P01619 116 aa10.92□□□□□ -0.66
DDX41-208ENST00000507955 DSCR9P59020 149 aa10.92□□□□□ -0.66
DDX41-208ENST00000507955 HIST2H2BCQ6DN03 193 aa10.92□□□□□ -0.66
DDX41-208ENST00000507955 SMPXQ9UHP9 88 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms