RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	IGHV3-30-5	P0DP03	117 aa		3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	RPS27	P42677	84 aa	Known RBP	3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	PLGLA	Q15195	96 aa		3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	CEMP1	Q6PRD7	247 aa	Predicted RBP	3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	ZNF826P	Q6ZT77	177 aa		3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	KTN1-AS1	Q86SY8	53 aa		3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	ZNF329	Q86UD4	541 aa		3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	MKX	Q8IYA7	352 aa		3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	WFDC11	Q8NEX6	87 aa		3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	SRSF12	Q8WXF0	261 aa	Known RBP	3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	TSACC	Q96A04	125 aa	Predicted RBP	3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	SPACA5	Q96QH8	159 aa		3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	SLC50A1	Q9BRV3	221 aa		3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	GOLGA4	Q13439	2230 aa	Known RBP	3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	COL5A1	P20908	1838 aa	Predicted RBP	3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	HEATR1	Q9H583	2144 aa	Known RBP	3.88	□□□□□ -1.79
TUSC3-205	ENST00000507316	TRAV7	A0A075B6U4	112 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	TRAV40	A0A0B4J280	105 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	IGKV1D-13	A0A0B4J2D9	117 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	SDHAF1	A6NFY7	115 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	IBA57-AS1	B1ANH7	110 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316		D6R8Y8	96 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316		H7C423	109 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	LST1	O00453	97 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	TIMM17B	O60830	172 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	PROP1	O75360	226 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	PPP1R17	O96001	155 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	CCK	P06307	115 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	IGKV1-13	P0DP09	117 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	FOXF2	Q12947	444 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	IGFL2	Q6UWQ7	119 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	MAPKAPK5-AS1	Q8N8E1	139 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	LY6G5B	Q8NDX9	201 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	DCANP1	Q8TF63	244 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	TM2D3	Q9BRN9	247 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	TIMM21	Q9BVV7	248 aa		3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	3.87	□□□□□ -1.79
TUSC3-205	ENST00000507316	CEP192	Q8TEP8	1941 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	TRAV13-2	A0A0B4J235	113 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316		A0A0J9YY99	117 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	WNT9B	O14905	357 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	ERC2-IT1	O76042	136 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	ZNF883	P0CG24	379 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	COX6B1	P14854	86 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	SAA4	P35542	130 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	ZNF138	P52744	262 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	SNRPD3	P62318	126 aa	Known RBP	3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	LAGE3	Q14657	143 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316		Q1RN00	199 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	C9orf139	Q6ZV77	190 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	FP248	Q71RG6	208 aa	Predicted RBP	3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	LYPD1	Q8N2G4	141 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	TMEM75	Q8N9X5	138 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	TMEM263	Q8WUH6	116 aa	Known RBP	3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	DEPP	Q9NTK1	212 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	MRPL35	Q9NZE8	188 aa	Known RBP	3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	HEATR5B	Q9P2D3	2071 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	SHANK1	Q9Y566	2161 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	MYO7A	Q13402	2215 aa		3.86	□□□□□ -1.79
TUSC3-205	ENST00000507316	MPDZ	O75970	2070 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	SPTB	P11277	2137 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	CACNA1C	Q13936	2221 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	TRAV41	A0A0B4J266	112 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	RNASE2	P10153	161 aa	Known RBP	3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	DUT	P33316	252 aa	Known RBP	3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	XCL1	P47992	114 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	UBE2E1	P51965	193 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	ZNF137P	P52743	207 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	APOC4	P55056	127 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	UBE2B	P63146	152 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	RHOH	Q15669	191 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	PVRIG	Q6DKI7	326 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	GUSBP11	Q6P575	273 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	MIR17HG	Q75NE6	70 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316		Q8IYB0	196 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	ZNF799	Q96GE5	643 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	UBE2E2	Q96LR5	201 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	SMIM14	Q96QK8	99 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	SCGB3A1	Q96QR1	104 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	XCL2	Q9UBD3	114 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	MOB4	Q9Y3A3	225 aa		3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	TNRC6B	Q9UPQ9	1833 aa	Known RBP	3.85	□□□□□ -1.79
TUSC3-205	ENST00000507316	EML6	Q6ZMW3	1958 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	IGHV1-69D	A0A0B4J2H0	117 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	TMEM223	A0PJW6	202 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	TMEM202	A6NGA9	273 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	DNAJC9-AS1	A6NH13	148 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	IQCF6	A8MYZ5	107 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316		H7BZZ5	65 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	DNAL4	O96015	105 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	ZNF22	P17026	224 aa	Predicted RBP	3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	PROK1	P58294	105 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	RBM3	P98179	157 aa	Known RBP	3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	COX8C	Q7Z4L0	72 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	EEF1AKMT3	Q96AZ1	226 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	CNFN	Q9BYD5	112 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	ZNF71	Q9NQZ8	489 aa	Predicted RBP	3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316	ICOS	Q9Y6W8	199 aa		3.84	□□□□□ -1.79
TUSC3-205	ENST00000507316		A0A0J9YXY3	114 aa		3.83	□□□□□ -1.8
TUSC3-205	ENST00000507316	C11orf86	A6NJI1	115 aa		3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms