RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 HTN3P15516 51 aa6.74□□□□□ -1.33
CLCN3-205ENST00000506924 EIF5AP63241 154 aaKnown RBP6.74□□□□□ -1.33
CLCN3-205ENST00000506924 ZFP69Q49AA0 526 aa6.74□□□□□ -1.33
CLCN3-205ENST00000506924 TMEM256Q8N2U0 113 aa6.74□□□□□ -1.33
CLCN3-205ENST00000506924 SFT2D1Q8WV19 159 aa6.74□□□□□ -1.33
CLCN3-205ENST00000506924 NIPSNAP3BQ9BS92 247 aa6.74□□□□□ -1.33
CLCN3-205ENST00000506924 PLAC8L1A1L4L8 177 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 IGLL5B9A064 214 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 F6UZH7 168 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 RHODO00212 210 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 ZNF324O75467 553 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-205ENST00000506924 IFNA7P01567 189 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 TCRAP04437 139 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 DEFB130BP0DP73 79 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 DEFB130AP0DP74 79 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 CRISP2P16562 243 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 C9orf62Q8N4C0 152 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 C5orf17Q8NAS9 161 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 STOML3Q8TAV4 291 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 TVP23CQ96ET8 276 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 LINC00479Q96M42 142 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 NOP10Q9NPE3 64 aaKnown RBP6.73□□□□□ -1.33
CLCN3-205ENST00000506924 TP53TG3Q9ULZ0 132 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 EPDR1Q9UM22 224 aa6.73□□□□□ -1.33
CLCN3-205ENST00000506924 KLK5Q9Y337 293 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-205ENST00000506924 KMT2CQ8NEZ4 4911 aaKnown RBP6.73□□□□□ -1.33
CLCN3-205ENST00000506924 DEFB131BA0A096LNP1 70 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 TRAV10A0A0B4J240 114 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 TRAV34A0A0B4J273 112 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 CBY3A6NI87 242 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 FAM74A7A6NL05 159 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 UMAD1C9J7I0 102 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 DAD1P61803 113 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 PIK3CD-AS1Q5SR53 167 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 MUC21Q5SSG8 566 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 CST9LP1Q5W188 147 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 PRNTQ86SH4 94 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 RNASE8Q8TDE3 154 aaKnown RBP6.72□□□□□ -1.33
CLCN3-205ENST00000506924 C16orf74Q96GX8 76 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 C20orf144Q9BQM9 153 aa6.72□□□□□ -1.33
CLCN3-205ENST00000506924 A0A1W2PRE2 83 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 GAGE12JA6NER3 117 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 PAGE4O60829 102 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 ATP5G3P48201 142 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 CCL20P78556 96 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 SLC51BQ86UW2 128 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 C2CD4CQ8TF44 421 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 TMEM263Q8WUH6 116 aaKnown RBP6.71□□□□□ -1.34
CLCN3-205ENST00000506924 MBD3L1Q8WWY6 194 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 PYGO2Q9BRQ0 406 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 TREM1Q9NP99 234 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 GSN-AS1Q9NRJ2 163 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 NAGKQ9UJ70 344 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 PSG8Q9UQ74 426 aa6.71□□□□□ -1.34
CLCN3-205ENST00000506924 LYSTQ99698 3801 aa6.7□□□□□ -1.34
CLCN3-205ENST00000506924 IGHV1OR15-1A0A075B7D0 117 aa6.7□□□□□ -1.34
CLCN3-205ENST00000506924 LCE6AA0A183 80 aa6.7□□□□□ -1.34
CLCN3-205ENST00000506924 C11orf94C9JXX5 98 aa6.7□□□□□ -1.34
CLCN3-205ENST00000506924 K7EQM0 130 aa6.7□□□□□ -1.34
CLCN3-205ENST00000506924 PEX7O00628 323 aa6.7□□□□□ -1.34
CLCN3-205ENST00000506924 IGLV2-11P01706 119 aa6.7□□□□□ -1.34
CLCN3-205ENST00000506924 NMBP08949 121 aa6.7□□□□□ -1.34
CLCN3-205ENST00000506924 DPPA3Q6W0C5 159 aa6.7□□□□□ -1.34
CLCN3-205ENST00000506924 EIF4E3Q8N5X7 224 aaKnown RBP6.7□□□□□ -1.34
CLCN3-205ENST00000506924 CYB561D1Q8N8Q1 229 aa6.7□□□□□ -1.34
CLCN3-205ENST00000506924 ATG101Q9BSB4 218 aa6.7□□□□□ -1.34
CLCN3-205ENST00000506924 KLF12Q9Y4X4 402 aa6.7□□□□□ -1.34
CLCN3-205ENST00000506924 TIMM8BQ9Y5J9 83 aaPredicted RBP6.7□□□□□ -1.34
CLCN3-205ENST00000506924 PLECQ15149 4684 aaKnown RBP6.7□□□□□ -1.34
CLCN3-205ENST00000506924 IGHV4-4A0A075B6R2 117 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 TRBV7-9A0A0J9YWB2 115 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 TEX48A0A1B0GUV7 120 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 LYRM9A8MSI8 78 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 SNURFLB1AK76 121 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 GAGE7O76087 117 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 LY6G6CO95867 125 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 GAGE12FP0CL80 117 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 GAGE12GP0CL81 117 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 GAGE12IP0CL82 117 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 SULT1A2P50226 295 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 ZNF80P51504 273 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-205ENST00000506924 FLI1Q01543 452 aaPredicted RBP6.69□□□□□ -1.34
CLCN3-205ENST00000506924 EIF5AL1Q6IS14 154 aaKnown RBP6.69□□□□□ -1.34
CLCN3-205ENST00000506924 ZNF493Q6ZR52 646 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 ARL6IP6Q8N6S5 226 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 TMEM75Q8N9X5 138 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 C11orf72Q8NBR9 251 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 NDFIP1Q9BT67 221 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 MSRB1Q9NZV6 116 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 GNG13Q9P2W3 67 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 LENEPQ9Y5L5 61 aa6.69□□□□□ -1.34
CLCN3-205ENST00000506924 SERTM2A0A1B0GWG4 89 aa6.68□□□□□ -1.34
CLCN3-205ENST00000506924 F5H768 121 aa6.68□□□□□ -1.34
CLCN3-205ENST00000506924 GNRH2O43555 120 aa6.68□□□□□ -1.34
CLCN3-205ENST00000506924 TMEM183BQ1AE95 376 aa6.68□□□□□ -1.34
CLCN3-205ENST00000506924 Q6AWC8 147 aa6.68□□□□□ -1.34
CLCN3-205ENST00000506924 ALKAL2Q6UX46 152 aa6.68□□□□□ -1.34
CLCN3-205ENST00000506924 Q6ZTI0 123 aa6.68□□□□□ -1.34
CLCN3-205ENST00000506924 TMEM183AQ8IXX5 376 aa6.68□□□□□ -1.34
CLCN3-205ENST00000506924 MDFICQ9P1T7 246 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms