RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 CYSRT1A8MQ03 144 aa4.34□□□□□ -1.71
SCLT1-207ENST00000506233 TSHBP01222 138 aa4.34□□□□□ -1.71
SCLT1-207ENST00000506233 HOXD3P31249 432 aaPredicted RBP4.34□□□□□ -1.71
SCLT1-207ENST00000506233 RASL10AQ92737 203 aa4.34□□□□□ -1.71
SCLT1-207ENST00000506233 Q9HAA7 133 aa4.34□□□□□ -1.71
SCLT1-207ENST00000506233 V9GYY9 64 aa4.34□□□□□ -1.71
SCLT1-207ENST00000506233 RANP62826 216 aaKnown RBP4.34□□□□□ -1.71
SCLT1-207ENST00000506233 HIST1H1EP10412 219 aaKnown RBP4.34□□□□□ -1.72
SCLT1-207ENST00000506233 ERCC8Q13216 396 aa4.34□□□□□ -1.72
SCLT1-207ENST00000506233 DNLZQ5SXM8 178 aa4.34□□□□□ -1.72
SCLT1-207ENST00000506233 EBLN2Q6P2I7 272 aa4.34□□□□□ -1.72
SCLT1-207ENST00000506233 OR8I2Q8N0Y5 310 aa4.34□□□□□ -1.72
SCLT1-207ENST00000506233 ZFAND2AQ8N6M9 145 aa4.34□□□□□ -1.72
SCLT1-207ENST00000506233 C18orf32Q8TCD1 76 aa4.34□□□□□ -1.72
SCLT1-207ENST00000506233 SCRT2Q9NQ03 307 aa4.34□□□□□ -1.72
SCLT1-207ENST00000506233 TMEM167BQ9NRX6 74 aa4.34□□□□□ -1.72
SCLT1-207ENST00000506233 BAHCC1Q9P281 2608 aa4.34□□□□□ -1.72
SCLT1-207ENST00000506233 FAM208BQ5VWN6 2430 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 ZNF253O75346 499 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 LEPP41159 167 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 SLC35B1P78383 322 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 WFDC11Q8NEX6 87 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 PACRGQ96M98 296 aaPredicted RBP4.33□□□□□ -1.72
SCLT1-207ENST00000506233 BIN3Q9NQY0 253 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 OTORQ9NRC9 128 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 PGPA6NDG6 321 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 CRXO43186 299 aaPredicted RBP4.33□□□□□ -1.72
SCLT1-207ENST00000506233 IL4P05112 153 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 CT45A10P0DMU9 189 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 RPS10P46783 165 aaKnown RBP4.33□□□□□ -1.72
SCLT1-207ENST00000506233 UBE2L3P68036 154 aaKnown RBP4.33□□□□□ -1.72
SCLT1-207ENST00000506233 JOSD1Q15040 202 aaPredicted RBP4.33□□□□□ -1.72
SCLT1-207ENST00000506233 TCEAL7Q9BRU2 100 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 KIF25-AS1Q9Y6Z4 181 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 TRAV9-1A0A075B6T8 112 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 IGKV2-40A0A087WW87 121 aaPredicted RBP4.33□□□□□ -1.72
SCLT1-207ENST00000506233 RBMY1BA6NDE4 496 aaKnown RBP4.33□□□□□ -1.72
SCLT1-207ENST00000506233 RBMY1EA6NEQ0 496 aaKnown RBP4.33□□□□□ -1.72
SCLT1-207ENST00000506233 HYPMO75409 117 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 GAGE7O76087 117 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 IGKV2D-40P01614 121 aaPredicted RBP4.33□□□□□ -1.72
SCLT1-207ENST00000506233 RBMY1DP0C7P1 496 aaKnown RBP4.33□□□□□ -1.72
SCLT1-207ENST00000506233 GAGE12FP0CL80 117 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 GAGE12GP0CL81 117 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 GAGE12IP0CL82 117 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 GAGE1Q13065 139 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 GAGE4Q13068 117 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 TSKUQ8WUA8 353 aa4.33□□□□□ -1.72
SCLT1-207ENST00000506233 PTPN13Q12923 2485 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 KIR2DL5BA0A0G2JN68 375 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 KIR2DL5BA0A0G2JPC4 375 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 IZUMO1RA6ND01 250 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 A8MWP6 167 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 SMIM6P0DI80 62 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 HIST1H1BP16401 226 aaKnown RBP4.32□□□□□ -1.72
SCLT1-207ENST00000506233 G0S2P27469 103 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 RHOGP84095 191 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 IQCJQ1A5X6 159 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 KIR2DL5AQ8N109 375 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 KIR2DL5BQ8NHK3 375 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 PFDN5Q99471 154 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 C21orf62Q9NYP8 219 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 IGHV3-35A0A0C4DH35 117 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 TMEM213A2RRL7 107 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 ZNF324O75467 553 aaPredicted RBP4.32□□□□□ -1.72
SCLT1-207ENST00000506233 SERF1AO75920 110 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 UFSP1Q6NVU6 142 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 AMTNQ6UX39 209 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 TEX43Q6ZNM6 134 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 LYPD1Q8N2G4 141 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 BLNKQ8WV28 456 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 FMC1Q96HJ9 113 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 OR5B12Q96R08 314 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 MED13LQ71F56 2210 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 OR7C2O60412 319 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 PDE6HQ13956 83 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 Q8TAT8 98 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 GPR82Q96P67 336 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 AGPAT4-IT1Q9H0P7 198 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 HIGD1AQ9Y241 93 aa4.32□□□□□ -1.72
SCLT1-207ENST00000506233 H3BUX3 64 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 COX7A2P2O60397 106 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 GPX1P07203 203 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 ARMS2P0C7Q2 107 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 NDUFA6P56556 154 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 DEFB113Q30KQ7 82 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 PDZD11Q5EBL8 140 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 IBA57Q5T440 356 aaKnown RBP4.31□□□□□ -1.72
SCLT1-207ENST00000506233 SUMO4Q6EEV6 95 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 MORN3Q6PF18 240 aaPredicted RBP4.31□□□□□ -1.72
SCLT1-207ENST00000506233 DEFB125Q8N687 156 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 C14orf144Q96I85 54 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 GFRA4Q9GZZ7 299 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 MOB4Q9Y3A3 225 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 SPTAN1Q13813 2472 aaKnown RBP4.31□□□□□ -1.72
SCLT1-207ENST00000506233 IGHV4-4A0A075B6R2 117 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 HIGD1CA8MV81 97 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 K7EMT4 169 aa4.31□□□□□ -1.72
SCLT1-207ENST00000506233 GIG44P09565 113 aaPredicted RBP4.31□□□□□ -1.72
SCLT1-207ENST00000506233 KIAA1644Q3SXP7 199 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms