RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 MT-ND4LP03901 98 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 TCRAP04437 139 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 PAEPP09466 180 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 SLC25A4P12235 298 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 CKS1BP61024 79 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 PSPHP78330 225 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 MIR22HGQ0VDD5 57 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 DIAPH2-AS1Q14236 149 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 HSD17B12Q53GQ0 312 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 SPRNQ5BIV9 151 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 HAGHLQ6PII5 290 aaPredicted RBP0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 CASC2Q6XLA1 102 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 ZCCHC23Q6ZST2 131 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 OR10AG1Q8NH19 301 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 AMELYQ99218 206 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 NABP2Q9BQ15 211 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 TMEM138Q9NPI0 162 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 FKBP11Q9NYL4 201 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 TPRP12270 2363 aaKnown RBP0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 POLQO75417 2590 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 UNC80Q8N2C7 3258 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 NEBP20929 6669 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 UNC13CQ8NB66 2214 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 OVOS2A0A0J9YW53 1432 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 OVOS2Q6IE36 1432 aa0.64□□□□□ -2.31
TOPBP1-204ENST00000505804 MACF1Q9UPN3 7388 aaKnown RBP0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 SYNE2Q8WXH0 6885 aaKnown RBP0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 TENM4Q6N022 2769 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 CNOT1A5YKK6 2376 aaKnown RBP0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 CTTNBP2Q8WZ74 1663 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 SYNJ1O43426 1573 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 CREBBPQ92793 2442 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 A0A096LPI6 279 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 C3orf85A0A1B0GTC6 90 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 H3BRM9 83 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 CCL25O15444 150 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 SLC25A5P05141 298 aaKnown RBP0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 LSM3P62310 102 aaKnown RBP0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 BLCAPP62952 87 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 QRFPP83859 136 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 SMIM21Q3B7S5 101 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 GLIPR1L1Q6UWM5 242 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 LINC00322Q6ZN03 302 aaPredicted RBP0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 Q8N6K4 173 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 OR4S1Q8NGB4 309 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 MAGOHBQ96A72 148 aaKnown RBP0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 AP1S3Q96PC3 154 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 BANF2Q9H503 90 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 CALML5Q9NZT1 146 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 HSPB8Q9UJY1 196 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 ATG2AQ2TAZ0 1938 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 PHLPP1O60346 1717 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 ATRQ13535 2644 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 FGD6Q6ZV73 1430 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 SPG11Q96JI7 2443 aa0.63□□□□□ -2.31
TOPBP1-204ENST00000505804 EP400Q96L91 3159 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 MED14O60244 1454 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 FSIP2Q5CZC0 6907 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 HIVEP3Q5T1R4 2406 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 GVINP1Q7Z2Y8 2422 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 ASPMQ8IZT6 3477 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 PNMA8CA0A1B0GUJ8 204 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 ZNF727A8MUV8 499 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 PPYP01298 95 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 IGHV3-33P01772 117 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 HIST1H1BP16401 226 aaKnown RBP0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 ETV6P41212 452 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 SNRPD3P62318 126 aaKnown RBP0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 SARNPP82979 210 aaKnown RBP0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 NEDD8Q15843 81 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 ASB16-AS1Q495Z4 193 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 TMEM244Q5VVB8 128 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 IZUMO2Q6UXV1 221 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 PLPP5Q8NEB5 264 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 CIB3Q96Q77 187 aaPredicted RBP0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 TMEM14CQ9P0S9 112 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 COPZ2Q9P299 210 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 METTL1Q9UBP6 276 aaKnown RBP0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 MPC1Q9Y5U8 109 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 LRP5O75197 1615 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 SPEGQ15772 3267 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 BOD1L1Q8NFC6 3051 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 PRG4Q92954 1404 aaPredicted RBP0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 SSPOA2VEC9 5147 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 ZFYVE26Q68DK2 2539 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 MYH7P12883 1935 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 FAM208BQ5VWN6 2430 aa0.62□□□□□ -2.31
TOPBP1-204ENST00000505804 FOCADQ5VW36 1801 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 SPEF2Q9C093 1822 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 MUC3AQ02505 3323 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 CFAP46Q8IYW2 2715 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 RELNP78509 3460 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 CPDO75976 1380 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 ZDBF2Q9HCK1 2354 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 MKI67P46013 3256 aaKnown RBP0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 CASZ1Q86V15 1759 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 HMCN2Q8NDA2 5059 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 IGLV3-32A0A0A0MS00 114 aa0.61□□□□□ -2.31
TOPBP1-204ENST00000505804 A6NN06 94 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms