RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 ANKRD29Q8N6D5 301 aa10.35□□□□□ -0.75
LETM1-203ENST00000505551 MBD3L2Q8NHZ7 208 aaPredicted RBP10.35□□□□□ -0.75
LETM1-203ENST00000505551 SPANXA1Q9NS26 97 aa10.35□□□□□ -0.75
LETM1-203ENST00000505551 RPUSD1Q9UJJ7 312 aaKnown RBP10.35□□□□□ -0.75
LETM1-203ENST00000505551 ABCA4P78363 2273 aa10.35□□□□□ -0.75
LETM1-203ENST00000505551 TRAV4A0A0B4J268 109 aa10.35□□□□□ -0.75
LETM1-203ENST00000505551 FCN3O75636 299 aa10.35□□□□□ -0.75
LETM1-203ENST00000505551 ASIPP42127 132 aa10.35□□□□□ -0.75
LETM1-203ENST00000505551 C9JAW5 83 aa10.34□□□□□ -0.75
LETM1-203ENST00000505551 LYPD1Q8N2G4 141 aa10.34□□□□□ -0.75
LETM1-203ENST00000505551 EDA2RQ9HAV5 297 aa10.34□□□□□ -0.75
LETM1-203ENST00000505551 IGLV2-18A0A075B6J9 118 aa10.34□□□□□ -0.75
LETM1-203ENST00000505551 H3BVH4 76 aa10.34□□□□□ -0.75
LETM1-203ENST00000505551 LGALS1P09382 135 aaKnown RBP10.34□□□□□ -0.75
LETM1-203ENST00000505551 IGLC6P0CF74 106 aa10.34□□□□□ -0.75
LETM1-203ENST00000505551 IFITM1P13164 125 aa10.34□□□□□ -0.75
LETM1-203ENST00000505551 LYZP61626 148 aa10.34□□□□□ -0.75
LETM1-203ENST00000505551 Q8N8P6 123 aa10.34□□□□□ -0.75
LETM1-203ENST00000505551 TCL1BO95988 128 aa10.33□□□□□ -0.76
LETM1-203ENST00000505551 RPL35AP18077 110 aaKnown RBP10.33□□□□□ -0.76
LETM1-203ENST00000505551 C17orf77Q96MU5 243 aa10.33□□□□□ -0.76
LETM1-203ENST00000505551 CRLF1O75462 422 aa10.33□□□□□ -0.76
LETM1-203ENST00000505551 IGLV1-44P01699 117 aa10.33□□□□□ -0.76
LETM1-203ENST00000505551 COX8CQ7Z4L0 72 aa10.33□□□□□ -0.76
LETM1-203ENST00000505551 DEFB108BQ8NET1 73 aa10.33□□□□□ -0.76
LETM1-203ENST00000505551 PKIGQ9Y2B9 76 aa10.33□□□□□ -0.76
LETM1-203ENST00000505551 SVEP1Q4LDE5 3571 aa10.32□□□□□ -0.76
LETM1-203ENST00000505551 SNCGO76070 127 aa10.32□□□□□ -0.76
LETM1-203ENST00000505551 IGLV2-23P01705 113 aa10.32□□□□□ -0.76
LETM1-203ENST00000505551 HCP5Q6MZN7 132 aa10.32□□□□□ -0.76
LETM1-203ENST00000505551 CNFNQ9BYD5 112 aa10.32□□□□□ -0.76
LETM1-203ENST00000505551 NDUFA3O95167 84 aa10.31□□□□□ -0.76
LETM1-203ENST00000505551 LHBP01229 141 aa10.31□□□□□ -0.76
LETM1-203ENST00000505551 CD7P09564 240 aa10.31□□□□□ -0.76
LETM1-203ENST00000505551 PPP1R27Q86WC6 154 aa10.31□□□□□ -0.76
LETM1-203ENST00000505551 OR4C13Q8NGP0 309 aa10.31□□□□□ -0.76
LETM1-203ENST00000505551 MYOZ3Q8TDC0 251 aa10.31□□□□□ -0.76
LETM1-203ENST00000505551 ASH1LQ9NR48 2969 aaKnown RBP10.31□□□□□ -0.76
LETM1-203ENST00000505551 MRGPRG-AS1Q2M3A8 158 aa10.31□□□□□ -0.76
LETM1-203ENST00000505551 GFRALQ6UXV0 394 aa10.31□□□□□ -0.76
LETM1-203ENST00000505551 SPTAN1Q13813 2472 aaKnown RBP10.31□□□□□ -0.76
LETM1-203ENST00000505551 SPTBN1Q01082 2364 aaKnown RBP10.31□□□□□ -0.76
LETM1-203ENST00000505551 PLXNB1O43157 2135 aa10.31□□□□□ -0.76
LETM1-203ENST00000505551 DCHS2Q6V1P9 2916 aa10.31□□□□□ -0.76
LETM1-203ENST00000505551 A0A0G2JNJ9 132 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 NBR2O15453 112 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 EGR2P11161 476 aaPredicted RBP10.3□□□□□ -0.76
LETM1-203ENST00000505551 Q8NA96 180 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 FAM57AQ8TBR7 257 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 MSRB1Q9NZV6 116 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 Q9UFV3 132 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 IGHV3-21A0A0B4J1V1 117 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 TRAV12-1A0A0B4J245 112 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 ZNF561-AS1K7EIQ3 104 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 M0R3E3 92 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 ZNF575Q86XF7 245 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 OR11H6Q8NGC7 330 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 PSMG3-AS1Q96PY0 264 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 RASL11BQ9BPW5 248 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 SHANK2-AS3Q9BTD1 123 aa10.3□□□□□ -0.76
LETM1-203ENST00000505551 F8VRH5 84 aa10.29□□□□□ -0.76
LETM1-203ENST00000505551 J3KT08 172 aa10.29□□□□□ -0.76
LETM1-203ENST00000505551 GATA1P15976 413 aaPredicted RBP10.29□□□□□ -0.76
LETM1-203ENST00000505551 HRCT1Q6UXD1 115 aa10.29□□□□□ -0.76
LETM1-203ENST00000505551 Q6ZQT7 251 aa10.29□□□□□ -0.76
LETM1-203ENST00000505551 TPSG1Q9NRR2 321 aa10.29□□□□□ -0.76
LETM1-203ENST00000505551 H7C1H1 209 aa10.29□□□□□ -0.76
LETM1-203ENST00000505551 H3BRN7 92 aa10.28□□□□□ -0.76
LETM1-203ENST00000505551 MRPS12O15235 138 aaKnown RBP10.28□□□□□ -0.76
LETM1-203ENST00000505551 RAI1Q7Z5J4 1906 aaPredicted RBP10.28□□□□□ -0.76
LETM1-203ENST00000505551 TRAV8-2A0A0B4J237 113 aa10.28□□□□□ -0.76
LETM1-203ENST00000505551 CD40P25942 277 aa10.28□□□□□ -0.76
LETM1-203ENST00000505551 CCL8P80075 99 aa10.28□□□□□ -0.76
LETM1-203ENST00000505551 C4orf26Q17RF5 130 aa10.28□□□□□ -0.76
LETM1-203ENST00000505551 NDUFA11Q86Y39 141 aa10.28□□□□□ -0.76
LETM1-203ENST00000505551 ZNF415Q09FC8 603 aa10.27□□□□□ -0.76
LETM1-203ENST00000505551 LAGE3Q14657 143 aa10.27□□□□□ -0.76
LETM1-203ENST00000505551 PLGLAQ15195 96 aa10.27□□□□□ -0.76
LETM1-203ENST00000505551 GAFA1Q96PS6 74 aa10.27□□□□□ -0.76
LETM1-203ENST00000505551 MDFICQ9P1T7 246 aa10.27□□□□□ -0.76
LETM1-203ENST00000505551 SCGB1C2P0DMR2 95 aa10.27□□□□□ -0.77
LETM1-203ENST00000505551 RASL10AQ92737 203 aa10.27□□□□□ -0.77
LETM1-203ENST00000505551 VMA21Q3ZAQ7 101 aa10.27□□□□□ -0.77
LETM1-203ENST00000505551 RAXQ9Y2V3 346 aa10.27□□□□□ -0.77
LETM1-203ENST00000505551 AKAP6Q13023 2319 aa10.26□□□□□ -0.77
LETM1-203ENST00000505551 PRR25Q96S07 402 aa10.26□□□□□ -0.77
LETM1-203ENST00000505551 SLC25A20O43772 301 aa10.26□□□□□ -0.77
LETM1-203ENST00000505551 ZNF80P51504 273 aaPredicted RBP10.26□□□□□ -0.77
LETM1-203ENST00000505551 PLEKHB2Q96CS7 222 aa10.26□□□□□ -0.77
LETM1-203ENST00000505551 AAMDCQ9H7C9 122 aa10.26□□□□□ -0.77
LETM1-203ENST00000505551 CSMD1Q96PZ7 3565 aa10.25□□□□□ -0.77
LETM1-203ENST00000505551 IGKV1-17P01599 117 aa10.25□□□□□ -0.77
LETM1-203ENST00000505551 COX6B1P14854 86 aa10.25□□□□□ -0.77
LETM1-203ENST00000505551 EFNA4P52798 201 aa10.25□□□□□ -0.77
LETM1-203ENST00000505551 PDE6HQ13956 83 aa10.25□□□□□ -0.77
LETM1-203ENST00000505551 DTX2Q86UW9 622 aa10.25□□□□□ -0.77
LETM1-203ENST00000505551 IL17DQ8TAD2 202 aa10.25□□□□□ -0.77
LETM1-203ENST00000505551 PRADC1Q9BSG0 188 aa10.25□□□□□ -0.77
LETM1-203ENST00000505551 ZNF815PA8K554 130 aa10.25□□□□□ -0.77
LETM1-203ENST00000505551 SRSF9Q13242 221 aaKnown RBP eCLIP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms