RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 LYRM9A8MSI8 78 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 LINC01551Q86U37 167 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 CARHSP1Q9Y2V2 147 aaKnown RBP5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 IGHV1OR15-1A0A075B7D0 117 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 TYMSP04818 313 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 LINC00694P0DN24 101 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 CENPWQ5EE01 88 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 RASL10AQ92737 203 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 DKK2Q9UBU2 259 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 GOLT1BQ9Y3E0 138 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 DEFB135Q30KP9 77 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 SMUG1Q53HV7 270 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 ISOC2Q96AB3 205 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 SH2D1AO60880 128 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 ATP6V1G1O75348 118 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 AKR1C3P42330 323 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 FAM162BQ5T6X4 162 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 TRAV12-2A0A075B6T6 113 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 TRAV34A0A0B4J273 112 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 SDF2L1Q9HCN8 221 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 CTRLP40313 264 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 PEA15Q15121 130 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 OR4B1Q8NGF8 309 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 OR11H2Q8NH07 326 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 TREM1Q9NP99 234 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 IL36BQ9NZH7 164 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 XCL2Q9UBD3 114 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 KMT2AQ03164 3969 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 HYDINQ4G0P3 5121 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 FAM231BA6NCW3 169 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 OR5AL1P0C617 328 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 NIPSNAP3BQ9BS92 247 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 GFRA4Q9GZZ7 299 aa5.88□□□□□ -1.47
CDC42SE2-208ENST00000505065 CST9LP1Q5W188 147 aa5.87□□□□□ -1.47
CDC42SE2-208ENST00000505065 OCC1Q8TAD7 63 aa5.87□□□□□ -1.47
CDC42SE2-208ENST00000505065 FABP5P3A8MUU1 101 aa5.87□□□□□ -1.47
CDC42SE2-208ENST00000505065 PRNTQ86SH4 94 aa5.87□□□□□ -1.47
CDC42SE2-208ENST00000505065 RYR2Q92736 4967 aa5.87□□□□□ -1.47
CDC42SE2-208ENST00000505065 H3BNG1 76 aa5.87□□□□□ -1.47
CDC42SE2-208ENST00000505065 SPXQ9BT56 116 aa5.87□□□□□ -1.47
CDC42SE2-208ENST00000505065 ZMAT4Q9H898 229 aa5.87□□□□□ -1.47
CDC42SE2-208ENST00000505065 BIN3Q9NQY0 253 aa5.87□□□□□ -1.47
CDC42SE2-208ENST00000505065 OSTCQ9NRP0 149 aa5.87□□□□□ -1.47
CDC42SE2-208ENST00000505065 CELA1Q9UNI1 258 aa5.87□□□□□ -1.47
CDC42SE2-208ENST00000505065 CIDEAO60543 219 aa5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 KCNS1Q96KK3 526 aa5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 SEC11CQ9BY50 192 aa5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 KIF25-AS1Q9Y6Z4 181 aa5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 V9GYV3 84 aa5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 FAT2Q9NYQ8 4349 aa5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 FXYD7P58549 80 aa5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 RPL23P62829 140 aaKnown RBP5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 C12orf74Q32Q52 190 aa5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 DMRTA1Q5VZB9 504 aa5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 TRAV12-3A0A0B4J271 114 aa5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 GPX1P07203 203 aa5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 RNASE4P34096 147 aaKnown RBP5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 NDFIP1Q9BT67 221 aa5.86□□□□□ -1.47
CDC42SE2-208ENST00000505065 TRGV11A0A075B6L2 103 aa5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 TMEM218A2RU14 115 aa5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 BAGE2Q86Y30 109 aa5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 NAT8Q9UHE5 227 aa5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 A0A0J9YWU9 116 aa5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 RS1O15537 224 aa5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 FAM210BQ96KR6 192 aa5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 YPEL4Q96NS1 127 aa5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 SMIM27A0A1W2PRY6 76 aa5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 GNG4P50150 75 aa5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 LINC00315P59091 139 aa5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 UBE2G1P62253 170 aa5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 PCNPQ8WW12 178 aaKnown RBP5.85□□□□□ -1.47
CDC42SE2-208ENST00000505065 ZNF705GA8MUZ8 300 aaPredicted RBP5.84□□□□□ -1.47
CDC42SE2-208ENST00000505065 NUDT10Q8NFP7 164 aa5.84□□□□□ -1.47
CDC42SE2-208ENST00000505065 NUDT11Q96G61 164 aa5.84□□□□□ -1.47
CDC42SE2-208ENST00000505065 SFTA3P0C7M3 94 aa5.84□□□□□ -1.47
CDC42SE2-208ENST00000505065 PNRC1Q12796 327 aaPredicted RBP5.84□□□□□ -1.47
CDC42SE2-208ENST00000505065 IMMP2LQ96T52 175 aa5.84□□□□□ -1.47
CDC42SE2-208ENST00000505065 TMEM242Q9NWH2 141 aa5.84□□□□□ -1.47
CDC42SE2-208ENST00000505065 MDFICQ9P1T7 246 aa5.84□□□□□ -1.47
CDC42SE2-208ENST00000505065 IGKV3-20P01619 116 aa5.84□□□□□ -1.47
CDC42SE2-208ENST00000505065 PRB4P10163 310 aaPredicted RBP5.84□□□□□ -1.47
CDC42SE2-208ENST00000505065 RPS20P60866 119 aaKnown RBP5.84□□□□□ -1.47
CDC42SE2-208ENST00000505065 ZFP2Q6ZN57 461 aa5.84□□□□□ -1.47
CDC42SE2-208ENST00000505065 PKD1P98161 4303 aa5.84□□□□□ -1.48
CDC42SE2-208ENST00000505065 A0A1B0GV50 99 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 DEFB121Q5J5C9 76 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 GTSF1Q8WW33 167 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 DNAH10Q8IVF4 4471 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 CBY3A6NI87 242 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 PRM2P04554 102 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 ZNF415Q09FC8 603 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 SFRP2Q96HF1 295 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 WWC2-AS2Q96NR7 200 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 A0A087WWC5 75 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 TCTAP57738 103 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 RAB14P61106 215 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 PRR27Q6MZM9 219 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 M0R2P5 195 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 GNRH2O43555 120 aa5.83□□□□□ -1.48
CDC42SE2-208ENST00000505065 RRN3P1Q2M238 152 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms