RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813		H3BMM0	161 aa		10.68	□□□□□ -0.7
CNBP-208	ENST00000504813	RAB5A	P20339	215 aa		10.68	□□□□□ -0.7
CNBP-208	ENST00000504813	RPL19	P84098	196 aa	Known RBP	10.68	□□□□□ -0.7
CNBP-208	ENST00000504813	FAM162B	Q5T6X4	162 aa		10.68	□□□□□ -0.7
CNBP-208	ENST00000504813	COX8C	Q7Z4L0	72 aa		10.68	□□□□□ -0.7
CNBP-208	ENST00000504813		Q8NAQ8	132 aa		10.68	□□□□□ -0.7
CNBP-208	ENST00000504813	OR4B1	Q8NGF8	309 aa		10.68	□□□□□ -0.7
CNBP-208	ENST00000504813	OR8A1	Q8NGG7	326 aa		10.68	□□□□□ -0.7
CNBP-208	ENST00000504813	FAM210B	Q96KR6	192 aa		10.68	□□□□□ -0.7
CNBP-208	ENST00000504813	C8orf49	Q96NF6	230 aa		10.68	□□□□□ -0.7
CNBP-208	ENST00000504813	YPEL4	Q96NS1	127 aa		10.68	□□□□□ -0.7
CNBP-208	ENST00000504813	RPP21	Q9H633	154 aa	Known RBP	10.68	□□□□□ -0.7
CNBP-208	ENST00000504813	TRBV24-1	A0A075B6N3	115 aa		10.67	□□□□□ -0.7
CNBP-208	ENST00000504813	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.67	□□□□□ -0.7
CNBP-208	ENST00000504813	C19orf71	A6NCJ1	209 aa		10.67	□□□□□ -0.7
CNBP-208	ENST00000504813	NPIPB6	E9PJ23	425 aa		10.67	□□□□□ -0.7
CNBP-208	ENST00000504813	DEFB4A	O15263	64 aa		10.67	□□□□□ -0.7
CNBP-208	ENST00000504813	HLA-DRB4	P13762	266 aa		10.67	□□□□□ -0.7
CNBP-208	ENST00000504813	GDF5OS	Q5U4N7	250 aa		10.67	□□□□□ -0.7
CNBP-208	ENST00000504813	EBLN2	Q6P2I7	272 aa		10.67	□□□□□ -0.7
CNBP-208	ENST00000504813	PPP1R14D	Q9NXH3	145 aa		10.67	□□□□□ -0.7
CNBP-208	ENST00000504813	TMA7	Q9Y2S6	64 aa	Known RBP	10.67	□□□□□ -0.7
CNBP-208	ENST00000504813	LENEP	Q9Y5L5	61 aa		10.67	□□□□□ -0.7
CNBP-208	ENST00000504813	HLA-DRB4	X5D2U9	266 aa		10.67	□□□□□ -0.7
CNBP-208	ENST00000504813	TRAV9-1	A0A075B6T8	112 aa		10.66	□□□□□ -0.7
CNBP-208	ENST00000504813	FAM3B	P58499	235 aa	Predicted RBP	10.66	□□□□□ -0.7
CNBP-208	ENST00000504813	DEFB1	P60022	68 aa		10.66	□□□□□ -0.7
CNBP-208	ENST00000504813	CT83	Q5H943	113 aa		10.66	□□□□□ -0.7
CNBP-208	ENST00000504813		X6R8D5	127 aa		10.66	□□□□□ -0.7
CNBP-208	ENST00000504813		A8MWL6	223 aa		10.65	□□□□□ -0.7
CNBP-208	ENST00000504813	CXCL1	P09341	107 aa		10.65	□□□□□ -0.7
CNBP-208	ENST00000504813	ZNF705D	P0CH99	300 aa	Predicted RBP	10.65	□□□□□ -0.7
CNBP-208	ENST00000504813	ZNF705B	P0CI00	300 aa	Predicted RBP	10.65	□□□□□ -0.7
CNBP-208	ENST00000504813	RBMY1A1	P0DJD3	496 aa	Known RBP	10.65	□□□□□ -0.7
CNBP-208	ENST00000504813	RBMY1C	P0DJD4	496 aa		10.65	□□□□□ -0.7
CNBP-208	ENST00000504813	NANOS2	P60321	138 aa	Known RBP	10.65	□□□□□ -0.7
CNBP-208	ENST00000504813	RBMY1F	Q15415	496 aa	Known RBP	10.65	□□□□□ -0.7
CNBP-208	ENST00000504813	C11orf45	Q8TAV5	145 aa		10.65	□□□□□ -0.7
CNBP-208	ENST00000504813	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.65	□□□□□ -0.7
CNBP-208	ENST00000504813	SAV1	Q9H4B6	383 aa	Predicted RBP	10.65	□□□□□ -0.7
CNBP-208	ENST00000504813	IGHV4-28	A0A0C4DH34	117 aa		10.64	□□□□□ -0.71
CNBP-208	ENST00000504813	FABP5P3	A8MUU1	101 aa		10.64	□□□□□ -0.71
CNBP-208	ENST00000504813	DUSP14	O95147	198 aa	Known RBP	10.64	□□□□□ -0.71
CNBP-208	ENST00000504813	MIF	P14174	115 aa		10.64	□□□□□ -0.71
CNBP-208	ENST00000504813	RPS10	P46783	165 aa	Known RBP	10.64	□□□□□ -0.71
CNBP-208	ENST00000504813	NUTF2	P61970	127 aa	Known RBP	10.64	□□□□□ -0.71
CNBP-208	ENST00000504813	FOXI2	Q6ZQN5	318 aa		10.64	□□□□□ -0.71
CNBP-208	ENST00000504813	OR2D3	Q8NGH3	330 aa		10.64	□□□□□ -0.71
CNBP-208	ENST00000504813	TSKU	Q8WUA8	353 aa		10.64	□□□□□ -0.71
CNBP-208	ENST00000504813	PYGO2	Q9BRQ0	406 aa		10.64	□□□□□ -0.71
CNBP-208	ENST00000504813	TRBV7-9	A0A0J9YWB2	115 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	SMIM27	A0A1W2PRY6	76 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	XKRY2	A2RUG3	117 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813		F6UB75	175 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	SH2D1A	O60880	128 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	TCL1A	P56279	114 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	LINC00476	Q8WZB0	136 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	CLUHP3	Q96NS8	147 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	C1QTNF4	Q9BXJ3	329 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	XCL2	Q9UBD3	114 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	NAT8B	Q9UHF3	227 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	KLK5	Q9Y337	293 aa	Predicted RBP	10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	TMEM189	A5PLL7	270 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	CRIP1	P50238	77 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	RPS20	P60866	119 aa	Known RBP	10.63	□□□□□ -0.71
CNBP-208	ENST00000504813	GFRA4	Q9GZZ7	299 aa		10.63	□□□□□ -0.71
CNBP-208	ENST00000504813		A0A0J9YX75	114 aa		10.62	□□□□□ -0.71
CNBP-208	ENST00000504813	FAM231B	A6NCW3	169 aa		10.62	□□□□□ -0.71
CNBP-208	ENST00000504813	C1orf196	B1AJZ1	125 aa		10.62	□□□□□ -0.71
CNBP-208	ENST00000504813	IGKV3-20	P01619	116 aa		10.62	□□□□□ -0.71
CNBP-208	ENST00000504813	GPX1	P07203	203 aa		10.61	□□□□□ -0.71
CNBP-208	ENST00000504813	LEP	P41159	167 aa		10.61	□□□□□ -0.71
CNBP-208	ENST00000504813	ZNF80	P51504	273 aa	Predicted RBP	10.61	□□□□□ -0.71
CNBP-208	ENST00000504813	LCE2D	Q5TA82	110 aa	Predicted RBP	10.61	□□□□□ -0.71
CNBP-208	ENST00000504813	NEU1	Q99519	415 aa		10.61	□□□□□ -0.71
CNBP-208	ENST00000504813	ORM1	P02763	201 aa		10.6	□□□□□ -0.71
CNBP-208	ENST00000504813	TYMS	P04818	313 aa		10.6	□□□□□ -0.71
CNBP-208	ENST00000504813	TSPO	P30536	169 aa		10.6	□□□□□ -0.71
CNBP-208	ENST00000504813	FXYD7	P58549	80 aa		10.6	□□□□□ -0.71
CNBP-208	ENST00000504813	RAB5B	P61020	215 aa		10.6	□□□□□ -0.71
CNBP-208	ENST00000504813	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.6	□□□□□ -0.71
CNBP-208	ENST00000504813	ODF3	Q96PU9	254 aa		10.6	□□□□□ -0.71
CNBP-208	ENST00000504813		A8MTW9	85 aa		10.59	□□□□□ -0.71
CNBP-208	ENST00000504813	HIGD1C	A8MV81	97 aa		10.59	□□□□□ -0.71
CNBP-208	ENST00000504813	LY6G6C	O95867	125 aa		10.59	□□□□□ -0.71
CNBP-208	ENST00000504813	CRISP2	P16562	243 aa		10.59	□□□□□ -0.71
CNBP-208	ENST00000504813	COX19	Q49B96	90 aa		10.59	□□□□□ -0.71
CNBP-208	ENST00000504813		Q6AWC8	147 aa		10.59	□□□□□ -0.71
CNBP-208	ENST00000504813	FAM19A4	Q96LR4	140 aa		10.59	□□□□□ -0.71
CNBP-208	ENST00000504813	KMT2A	Q03164	3969 aa		10.58	□□□□□ -0.72
CNBP-208	ENST00000504813	TMSB15B	A0A087X1C1	80 aa		10.58	□□□□□ -0.72
CNBP-208	ENST00000504813	TRAV21	A0A0B4J279	112 aa		10.58	□□□□□ -0.72
CNBP-208	ENST00000504813		J3KRW8	73 aa		10.58	□□□□□ -0.72
CNBP-208	ENST00000504813	SPINK4	O60575	86 aa		10.58	□□□□□ -0.72
CNBP-208	ENST00000504813	RNASE4	P34096	147 aa	Known RBP	10.58	□□□□□ -0.72
CNBP-208	ENST00000504813	ZFAND2A	Q8N6M9	145 aa		10.58	□□□□□ -0.72
CNBP-208	ENST00000504813	NUP35	Q8NFH5	326 aa		10.58	□□□□□ -0.72
CNBP-208	ENST00000504813	BORCS7	Q96B45	105 aa		10.58	□□□□□ -0.72
CNBP-208	ENST00000504813	WDR73	Q6P4I2	378 aa		10.58	□□□□□ -0.72
CNBP-208	ENST00000504813	PGLYRP4	Q96LB8	373 aa		10.58	□□□□□ -0.72

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