RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 LEPP41159 167 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 TAS2R60P59551 318 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 ANXA2RQ3ZCQ2 193 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 CENPWQ5EE01 88 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 PRNTQ86SH4 94 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 OR11H2Q8NH07 326 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 OCC1Q8TAD7 63 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 SMIM12Q96EX1 92 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 TREM1Q9NP99 234 aa3.53□□□□□ -1.84
LMNB1-208ENST00000504788 HYDINQ4G0P3 5121 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 H7BYZ3 331 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 INSP01308 110 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 IFNA1P01562 189 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 GPX1P07203 203 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 RNASE3P12724 160 aaKnown RBP3.52□□□□□ -1.85
LMNB1-208ENST00000504788 MIFP14174 115 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 AKR1C3P42330 323 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 SAPCD1Q5SSQ6 148 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 DNLZQ5SXM8 178 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 LINC01551Q86U37 167 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 TMEM256Q8N2U0 113 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 NHLRC2Q8NBF2 726 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 PYGO2Q9BRQ0 406 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 CELA1Q9UNI1 258 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 VPS13DQ5THJ4 4388 aa3.52□□□□□ -1.85
LMNB1-208ENST00000504788 A0A0J9YWU9 116 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 SMIM9A6NGZ8 99 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 ZNF705GA8MUZ8 300 aaPredicted RBP3.51□□□□□ -1.85
LMNB1-208ENST00000504788 J3KRW8 73 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 DEFB4AO15263 64 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 SH2D1AO60880 128 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 TYMSP04818 313 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 S100A9P06702 114 aaKnown RBP3.51□□□□□ -1.85
LMNB1-208ENST00000504788 RNASE4P34096 147 aaKnown RBP3.51□□□□□ -1.85
LMNB1-208ENST00000504788 SMUG1Q53HV7 270 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 C10orf91Q5T1B1 145 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 BAGE2Q86Y30 109 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 TMEM263Q8WUH6 116 aaKnown RBP3.51□□□□□ -1.85
LMNB1-208ENST00000504788 SSBP4Q9BWG4 385 aaPredicted RBP3.51□□□□□ -1.85
LMNB1-208ENST00000504788 SCRT2Q9NQ03 307 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 MDFICQ9P1T7 246 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 DKK2Q9UBU2 259 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 LY96Q9Y6Y9 160 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 U3KQK5 164 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 IGHV1OR15-1A0A075B7D0 117 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 TRAV21A0A0B4J279 112 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 IGHV3-16A0A0C4DH30 117 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 KRBOX1C9JBD0 128 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 K7EQM0 130 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 GNRH2O43555 120 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 TCL1AP56279 114 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 UBE2G1P62253 170 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 DAZ2Q13117 558 aaKnown RBP3.51□□□□□ -1.85
LMNB1-208ENST00000504788 OR5I1Q13606 314 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 IBA57Q5T440 356 aaKnown RBP3.51□□□□□ -1.85
LMNB1-208ENST00000504788 POM121L12Q8N7R1 296 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 C9orf85Q96MD7 179 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 C18orf15Q96N68 181 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 EIF5A2Q9GZV4 153 aaKnown RBP3.51□□□□□ -1.85
LMNB1-208ENST00000504788 SDF2L1Q9HCN8 221 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 RYR3Q15413 4870 aa3.51□□□□□ -1.85
LMNB1-208ENST00000504788 KMT2AQ03164 3969 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 IGHV3OR16-12A0A075B7B8 117 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 FABP5P3A8MUU1 101 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 SPINK4O60575 86 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 IGLC6P0CF74 106 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 RPL23P62829 140 aaKnown RBP3.5□□□□□ -1.85
LMNB1-208ENST00000504788 RPL19P84098 196 aaKnown RBP3.5□□□□□ -1.85
LMNB1-208ENST00000504788 RRN3P1Q2M238 152 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 C12orf74Q32Q52 190 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 MUC21Q5SSG8 566 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 FAM162BQ5T6X4 162 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 ZNF493Q6ZR52 646 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 FAM231DQ6ZW35 169 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 ISOC2Q96AB3 205 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 NIPSNAP3BQ9BS92 247 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 ZMAT4Q9H898 229 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 GOLT1BQ9Y3E0 138 aa3.5□□□□□ -1.85
LMNB1-208ENST00000504788 TMEM218A2RU14 115 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 SNAI2O43623 268 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 NXPH4O95158 308 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 CXCL1P09341 107 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 SFTA3P0C7M3 94 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 GNG4P50150 75 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 FOXA3P55318 350 aaPredicted RBP3.49□□□□□ -1.85
LMNB1-208ENST00000504788 RAB14P61106 215 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 UFSP1Q6NVU6 142 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 UQCC3Q6UW78 93 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 NUDT10Q8NFP7 164 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 GTSF1Q8WW33 167 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 RASL10AQ92737 203 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 PTH2Q96A98 100 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 NUDT11Q96G61 164 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 C16orf74Q96GX8 76 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 LINC01587Q99440 93 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 SMIM7Q9BQ49 75 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 CNFNQ9BYD5 112 aa3.49□□□□□ -1.85
LMNB1-208ENST00000504788 RNASE7Q9H1E1 156 aaKnown RBP3.49□□□□□ -1.85
LMNB1-208ENST00000504788 GSN-AS1Q9NRJ2 163 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms