RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SPINK13Q1W4C9 94 aa7.62□□□□□ -1.19
TPM3-217ENST00000504663 TSKUQ8WUA8 353 aa7.62□□□□□ -1.19
TPM3-217ENST00000504663 MCRIP2Q9BUT9 160 aaKnown RBP7.62□□□□□ -1.19
TPM3-217ENST00000504663 TRAV12-2A0A075B6T6 113 aa7.61□□□□□ -1.19
TPM3-217ENST00000504663 C7orf71A4D174 169 aa7.61□□□□□ -1.19
TPM3-217ENST00000504663 FABP5P3A8MUU1 101 aa7.61□□□□□ -1.19
TPM3-217ENST00000504663 TYMSP04818 313 aa7.61□□□□□ -1.19
TPM3-217ENST00000504663 LEPP41159 167 aa7.61□□□□□ -1.19
TPM3-217ENST00000504663 FOXA3P55318 350 aaPredicted RBP7.61□□□□□ -1.19
TPM3-217ENST00000504663 TCL1AP56279 114 aa7.61□□□□□ -1.19
TPM3-217ENST00000504663 KRTAP10-11P60412 298 aa7.61□□□□□ -1.19
TPM3-217ENST00000504663 EGFEM1PQ0D2K5 195 aa7.61□□□□□ -1.19
TPM3-217ENST00000504663 NUP35Q8NFH5 326 aa7.61□□□□□ -1.19
TPM3-217ENST00000504663 OR2D3Q8NGH3 330 aa7.61□□□□□ -1.19
TPM3-217ENST00000504663 GFRA4Q9GZZ7 299 aa7.61□□□□□ -1.19
TPM3-217ENST00000504663 X6R8D5 127 aa7.61□□□□□ -1.19
TPM3-217ENST00000504663 TRAV9-1A0A075B6T8 112 aa7.6□□□□□ -1.19
TPM3-217ENST00000504663 TRAV21A0A0B4J279 112 aa7.6□□□□□ -1.19
TPM3-217ENST00000504663 A0A1B0GXF2 115 aa7.6□□□□□ -1.19
TPM3-217ENST00000504663 A0A1W2PPQ1 181 aa7.6□□□□□ -1.19
TPM3-217ENST00000504663 FAM231BA6NCW3 169 aa7.6□□□□□ -1.19
TPM3-217ENST00000504663 RNASE4P34096 147 aaKnown RBP7.6□□□□□ -1.19
TPM3-217ENST00000504663 CDKN1BP46527 198 aa7.6□□□□□ -1.19
TPM3-217ENST00000504663 FXYD7P58549 80 aa7.6□□□□□ -1.19
TPM3-217ENST00000504663 HUWE1Q7Z6Z7 4374 aaKnown RBP7.59□□□□□ -1.19
TPM3-217ENST00000504663 TMSB15BA0A087X1C1 80 aa7.59□□□□□ -1.19
TPM3-217ENST00000504663 TMEM189A5PLL7 270 aa7.59□□□□□ -1.19
TPM3-217ENST00000504663 HIGD1CA8MV81 97 aa7.59□□□□□ -1.19
TPM3-217ENST00000504663 GPX1P07203 203 aa7.59□□□□□ -1.19
TPM3-217ENST00000504663 CTRLP40313 264 aa7.59□□□□□ -1.19
TPM3-217ENST00000504663 CMC4P56277 68 aaPredicted RBP7.59□□□□□ -1.19
TPM3-217ENST00000504663 TDRG1Q3Y452 100 aa7.59□□□□□ -1.19
TPM3-217ENST00000504663 ANXA2RQ3ZCQ2 193 aa7.59□□□□□ -1.19
TPM3-217ENST00000504663 PRR31Q5SQ13 230 aa7.59□□□□□ -1.19
TPM3-217ENST00000504663 DNLZQ5SXM8 178 aa7.59□□□□□ -1.19
TPM3-217ENST00000504663 DEFB125Q8N687 156 aa7.59□□□□□ -1.19
TPM3-217ENST00000504663 CNFNQ9BYD5 112 aa7.59□□□□□ -1.19
TPM3-217ENST00000504663 DNAH9Q9NYC9 4486 aa7.59□□□□□ -1.19
TPM3-217ENST00000504663 TRAV12-3A0A0B4J271 114 aa7.58□□□□□ -1.2
TPM3-217ENST00000504663 A8MWL6 223 aa7.58□□□□□ -1.2
TPM3-217ENST00000504663 SNAI2O43623 268 aa7.58□□□□□ -1.2
TPM3-217ENST00000504663 RAB5AP20339 215 aa7.58□□□□□ -1.2
TPM3-217ENST00000504663 CDPF1Q6NVV7 123 aa7.58□□□□□ -1.2
TPM3-217ENST00000504663 C1orf158Q8N1D5 194 aa7.58□□□□□ -1.2
TPM3-217ENST00000504663 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.58□□□□□ -1.2
TPM3-217ENST00000504663 GATD1Q8NB37 220 aa7.58□□□□□ -1.2
TPM3-217ENST00000504663 DAZAP1Q96EP5 407 aaKnown RBP7.58□□□□□ -1.2
TPM3-217ENST00000504663 FAM210BQ96KR6 192 aa7.58□□□□□ -1.2
TPM3-217ENST00000504663 SSBP4Q9BWG4 385 aaPredicted RBP7.58□□□□□ -1.2
TPM3-217ENST00000504663 SCRT2Q9NQ03 307 aa7.58□□□□□ -1.2
TPM3-217ENST00000504663 NAT8BQ9UHF3 227 aa7.58□□□□□ -1.2
TPM3-217ENST00000504663 MUC4Q99102 2169 aa7.57□□□□□ -1.2
TPM3-217ENST00000504663 GRIFINA4D1Z8 144 aa7.57□□□□□ -1.2
TPM3-217ENST00000504663 ARMS2P0C7Q2 107 aa7.57□□□□□ -1.2
TPM3-217ENST00000504663 RNASE3P12724 160 aaKnown RBP7.57□□□□□ -1.2
TPM3-217ENST00000504663 TSPOP30536 169 aa7.57□□□□□ -1.2
TPM3-217ENST00000504663 MUC21Q5SSG8 566 aa7.57□□□□□ -1.2
TPM3-217ENST00000504663 KCNIP4Q6PIL6 250 aa7.57□□□□□ -1.2
TPM3-217ENST00000504663 STHQ8IWL8 128 aa7.57□□□□□ -1.2
TPM3-217ENST00000504663 CSNK1G2-AS1Q8NCQ2 148 aa7.57□□□□□ -1.2
TPM3-217ENST00000504663 LINC00467Q9BRT7 94 aa7.57□□□□□ -1.2
TPM3-217ENST00000504663 TP53TG3Q9ULZ0 132 aa7.57□□□□□ -1.2
TPM3-217ENST00000504663 G3V4G9 280 aa7.56□□□□□ -1.2
TPM3-217ENST00000504663 GNRH2O43555 120 aa7.56□□□□□ -1.2
TPM3-217ENST00000504663 ORM1P02763 201 aa7.56□□□□□ -1.2
TPM3-217ENST00000504663 S100PP25815 95 aa7.56□□□□□ -1.2
TPM3-217ENST00000504663 RPS20P60866 119 aaKnown RBP7.56□□□□□ -1.2
TPM3-217ENST00000504663 LYZL1Q6UWQ5 148 aa7.56□□□□□ -1.2
TPM3-217ENST00000504663 TMEM136Q6ZRR5 245 aa7.56□□□□□ -1.2
TPM3-217ENST00000504663 BTF3L4Q96K17 158 aa7.56□□□□□ -1.2
TPM3-217ENST00000504663 PGLYRP4Q96LB8 373 aa7.56□□□□□ -1.2
TPM3-217ENST00000504663 MRPL18Q9H0U6 180 aaKnown RBP7.56□□□□□ -1.2
TPM3-217ENST00000504663 SRD5A3Q9H8P0 318 aa7.56□□□□□ -1.2
TPM3-217ENST00000504663 IGHV1OR15-1A0A075B7D0 117 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 IGHV3-16A0A0C4DH30 117 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 SPINK4O60575 86 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 NXPH4O95158 308 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 PRM2P04554 102 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 OR5AL1P0C617 328 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 MED14OSP0DP75 135 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 RPL35AP18077 110 aaKnown RBP7.55□□□□□ -1.2
TPM3-217ENST00000504663 MRPL54Q6P161 138 aaKnown RBP7.55□□□□□ -1.2
TPM3-217ENST00000504663 ATP5L2Q7Z4Y8 100 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 FER1L6-AS1Q8NA97 138 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 IL17DQ8TAD2 202 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 C9orf85Q96MD7 179 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 C20orf144Q9BQM9 153 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 NAGKQ9UJ70 344 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 NBEAL1Q6ZS30 2694 aa7.55□□□□□ -1.2
TPM3-217ENST00000504663 IGHV4-4A0A075B6R2 117 aa7.54□□□□□ -1.2
TPM3-217ENST00000504663 H3BVH4 76 aa7.54□□□□□ -1.2
TPM3-217ENST00000504663 SPRY2O43597 315 aa7.54□□□□□ -1.2
TPM3-217ENST00000504663 INSP01308 110 aa7.54□□□□□ -1.2
TPM3-217ENST00000504663 AMBPP02760 352 aa7.54□□□□□ -1.2
TPM3-217ENST00000504663 GTSCR1Q86UQ5 136 aa7.54□□□□□ -1.2
TPM3-217ENST00000504663 C11orf72Q8NBR9 251 aa7.54□□□□□ -1.2
TPM3-217ENST00000504663 OR10AG1Q8NH19 301 aa7.54□□□□□ -1.2
TPM3-217ENST00000504663 XCL2Q9UBD3 114 aa7.54□□□□□ -1.2
TPM3-217ENST00000504663 MUC21A0A0G2JKD1 596 aa7.53□□□□□ -1.2
TPM3-217ENST00000504663 MUC21A0A140T8X8 626 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms