RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 FAM3BP58499 235 aaPredicted RBP9.74□□□□□ -0.85
PDLIM7-211ENST00000504318 C18orf15Q96N68 181 aa9.74□□□□□ -0.85
PDLIM7-211ENST00000504318 PRSS29PA6NIE9 313 aa9.73□□□□□ -0.85
PDLIM7-211ENST00000504318 OR10J4P0C629 311 aa9.73□□□□□ -0.85
PDLIM7-211ENST00000504318 ANXA2RQ3ZCQ2 193 aa9.73□□□□□ -0.85
PDLIM7-211ENST00000504318 UBE2DNLQ8IWF7 75 aa9.73□□□□□ -0.85
PDLIM7-211ENST00000504318 PAXXQ9BUH6 204 aa9.73□□□□□ -0.85
PDLIM7-211ENST00000504318 KRTAP17-1Q9BYP8 105 aa9.73□□□□□ -0.85
PDLIM7-211ENST00000504318 ZNF492Q9P255 531 aa9.73□□□□□ -0.85
PDLIM7-211ENST00000504318 LINC00588Q9Y4M8 146 aa9.73□□□□□ -0.85
PDLIM7-211ENST00000504318 F6UZH7 168 aa9.72□□□□□ -0.85
PDLIM7-211ENST00000504318 OR7C2O60412 319 aa9.72□□□□□ -0.85
PDLIM7-211ENST00000504318 PAGE4O60829 102 aa9.72□□□□□ -0.85
PDLIM7-211ENST00000504318 FAM74A3Q4VXF1 159 aa9.72□□□□□ -0.85
PDLIM7-211ENST00000504318 Q6ZTI0 123 aa9.72□□□□□ -0.85
PDLIM7-211ENST00000504318 CYB561D1Q8N8Q1 229 aa9.72□□□□□ -0.85
PDLIM7-211ENST00000504318 NKX6-2Q9C056 277 aaPredicted RBP9.72□□□□□ -0.85
PDLIM7-211ENST00000504318 TMPRSS5Q9H3S3 457 aa9.72□□□□□ -0.85
PDLIM7-211ENST00000504318 TRBV7-9A0A0J9YWB2 115 aa9.71□□□□□ -0.86
PDLIM7-211ENST00000504318 GAGE12BA1L429 117 aa9.71□□□□□ -0.86
PDLIM7-211ENST00000504318 EIF3GO75821 320 aaKnown RBP eCLIP9.71□□□□□ -0.86
PDLIM7-211ENST00000504318 GAGE7O76087 117 aa9.71□□□□□ -0.86
PDLIM7-211ENST00000504318 GAGE12FP0CL80 117 aa9.71□□□□□ -0.86
PDLIM7-211ENST00000504318 GAGE12GP0CL81 117 aa9.71□□□□□ -0.86
PDLIM7-211ENST00000504318 GAGE12IP0CL82 117 aa9.71□□□□□ -0.86
PDLIM7-211ENST00000504318 CST9LP1Q5W188 147 aa9.71□□□□□ -0.86
PDLIM7-211ENST00000504318 AAMDCQ9H7C9 122 aa9.71□□□□□ -0.86
PDLIM7-211ENST00000504318 GSN-AS1Q9NRJ2 163 aa9.71□□□□□ -0.86
PDLIM7-211ENST00000504318 TP53TG3Q9ULZ0 132 aa9.71□□□□□ -0.86
PDLIM7-211ENST00000504318 TRAV26-1A0A087WT03 109 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 RBAKDNA6NC62 111 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 SPINK4O60575 86 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 NUDT3O95989 172 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 TCL1AP56279 114 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 UBE2L3P68036 154 aaKnown RBP9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 PNRC1Q12796 327 aaPredicted RBP9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 RHEBQ15382 184 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 LYPD1Q8N2G4 141 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 CLRN3Q8NCR9 226 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 Q8TAT8 98 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 VSIG2Q96IQ7 327 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 TCEAL7Q9BRU2 100 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 KRTAP1-5Q9BYS1 174 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 Q9H3A6 140 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 KLF12Q9Y4X4 402 aa9.7□□□□□ -0.86
PDLIM7-211ENST00000504318 NBDYA0A0U1RRE5 68 aa9.69□□□□□ -0.86
PDLIM7-211ENST00000504318 A0A1W2PRE2 83 aa9.69□□□□□ -0.86
PDLIM7-211ENST00000504318 SNURFLB1AK76 121 aa9.69□□□□□ -0.86
PDLIM7-211ENST00000504318 H3BNG1 76 aa9.69□□□□□ -0.86
PDLIM7-211ENST00000504318 RNASE4P34096 147 aaKnown RBP9.69□□□□□ -0.86
PDLIM7-211ENST00000504318 CEBPGP53567 150 aa9.69□□□□□ -0.86
PDLIM7-211ENST00000504318 UBE2G2P60604 165 aa9.69□□□□□ -0.86
PDLIM7-211ENST00000504318 IBA57Q5T440 356 aaKnown RBP9.69□□□□□ -0.86
PDLIM7-211ENST00000504318 FAM74A7A6NL05 159 aa9.68□□□□□ -0.86
PDLIM7-211ENST00000504318 DIRC3C9JPN6 131 aa9.68□□□□□ -0.86
PDLIM7-211ENST00000504318 M0R036 132 aa9.68□□□□□ -0.86
PDLIM7-211ENST00000504318 ZNF138P52744 262 aa9.68□□□□□ -0.86
PDLIM7-211ENST00000504318 RANP62826 216 aaKnown RBP9.68□□□□□ -0.86
PDLIM7-211ENST00000504318 TMEM78Q5T7P6 136 aa9.68□□□□□ -0.86
PDLIM7-211ENST00000504318 SMIM7Q9BQ49 75 aa9.68□□□□□ -0.86
PDLIM7-211ENST00000504318 A0A0J9YY99 117 aa9.67□□□□□ -0.86
PDLIM7-211ENST00000504318 ZNF727A8MUV8 499 aa9.67□□□□□ -0.86
PDLIM7-211ENST00000504318 B4DEV8 164 aa9.67□□□□□ -0.86
PDLIM7-211ENST00000504318 GPX1P07203 203 aa9.67□□□□□ -0.86
PDLIM7-211ENST00000504318 OR5I1Q13606 314 aa9.67□□□□□ -0.86
PDLIM7-211ENST00000504318 ESRGQ1W209 222 aa9.67□□□□□ -0.86
PDLIM7-211ENST00000504318 C1orf134Q5TEV5 83 aa9.67□□□□□ -0.86
PDLIM7-211ENST00000504318 Q6AWC8 147 aa9.67□□□□□ -0.86
PDLIM7-211ENST00000504318 TVP23CQ96ET8 276 aa9.67□□□□□ -0.86
PDLIM7-211ENST00000504318 UPK3BQ9BT76 320 aa9.67□□□□□ -0.86
PDLIM7-211ENST00000504318 RYR1P21817 5038 aa9.66□□□□□ -0.86
PDLIM7-211ENST00000504318 LRP1BQ9NZR2 4599 aa9.66□□□□□ -0.86
PDLIM7-211ENST00000504318 IGHV1OR15-1A0A075B7D0 117 aa9.66□□□□□ -0.86
PDLIM7-211ENST00000504318 A0A096LPF7 62 aa9.66□□□□□ -0.86
PDLIM7-211ENST00000504318 SCO1O75880 301 aa9.66□□□□□ -0.86
PDLIM7-211ENST00000504318 CCL18P55774 89 aa9.66□□□□□ -0.86
PDLIM7-211ENST00000504318 C11orf52Q96A22 123 aa9.66□□□□□ -0.86
PDLIM7-211ENST00000504318 ATG101Q9BSB4 218 aa9.66□□□□□ -0.86
PDLIM7-211ENST00000504318 NAT8Q9UHE5 227 aa9.66□□□□□ -0.86
PDLIM7-211ENST00000504318 PCLOQ9Y6V0 5065 aa9.66□□□□□ -0.86
PDLIM7-211ENST00000504318 TNP2Q05952 138 aa9.65□□□□□ -0.86
PDLIM7-211ENST00000504318 TMEM241Q24JQ0 296 aa9.65□□□□□ -0.86
PDLIM7-211ENST00000504318 ATRAIDQ6UW56 229 aa9.65□□□□□ -0.86
PDLIM7-211ENST00000504318 PARLQ9H300 379 aa9.65□□□□□ -0.86
PDLIM7-211ENST00000504318 OTORQ9NRC9 128 aa9.65□□□□□ -0.86
PDLIM7-211ENST00000504318 LENEPQ9Y5L5 61 aa9.65□□□□□ -0.86
PDLIM7-211ENST00000504318 HSPG2P98160 4391 aa9.64□□□□□ -0.87
PDLIM7-211ENST00000504318 A0A087WWC5 75 aa9.64□□□□□ -0.87
PDLIM7-211ENST00000504318 TRGV1A0A0A0MS02 117 aa9.64□□□□□ -0.87
PDLIM7-211ENST00000504318 C7orf77A4D0Y5 90 aa9.64□□□□□ -0.87
PDLIM7-211ENST00000504318 ZNF674Q2M3X9 581 aa9.64□□□□□ -0.87
PDLIM7-211ENST00000504318 SMCO4Q9NRQ5 59 aa9.64□□□□□ -0.87
PDLIM7-211ENST00000504318 MDFICQ9P1T7 246 aa9.64□□□□□ -0.87
PDLIM7-211ENST00000504318 MRPS16Q9Y3D3 137 aaKnown RBP9.64□□□□□ -0.87
PDLIM7-211ENST00000504318 TDRG1Q3Y452 100 aa9.63□□□□□ -0.87
PDLIM7-211ENST00000504318 ZNF575Q86XF7 245 aa9.63□□□□□ -0.87
PDLIM7-211ENST00000504318 C6orf223Q8N319 242 aa9.63□□□□□ -0.87
PDLIM7-211ENST00000504318 ARL6IP6Q8N6S5 226 aa9.63□□□□□ -0.87
PDLIM7-211ENST00000504318 Q9H8V8 135 aa9.63□□□□□ -0.87
PDLIM7-211ENST00000504318 SDF2L1Q9HCN8 221 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms