RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 ZNF493Q6ZR52 646 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 RNF152Q8N8N0 203 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 KMT2EQ8IZD2 1858 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 SPART-AS1P0CW21 52 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 PRO1854Q9UHT4 67 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 TRAV12-1A0A0B4J245 112 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 TINCRA0A1B0GVN0 87 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 CCL18P55774 89 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 KIF26BQ2KJY2 2108 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 C11orf52Q96A22 123 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 DKK2Q9UBU2 259 aa5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 YLPM1P49750 1951 aaKnown RBP5.61□□□□□ -1.51
SYNPO2-205ENST00000504178 ARID1AO14497 2285 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 IGHV4-4A0A075B6R2 117 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 C9orf153Q5TBE3 101 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 C5orf56Q8N8D9 126 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 SPRY2O43597 315 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 MRPL23Q16540 153 aaKnown RBP5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 C4orf3Q8WVX3 66 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 C20orf144Q9BQM9 153 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 I3L2K1 104 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 K7ERJ3 54 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 ATP5G1P05496 136 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 ZNF124Q15973 351 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 ATP6V0E2Q8NHE4 81 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 WIPF2Q8TF74 440 aaPredicted RBP5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 ZNF503Q96F45 646 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 Q9H8V8 135 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 HERV-K104P63124 156 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 C16orf54Q6UWD8 224 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 PPDPFLQ8WWR9 84 aa5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 TP53BP1Q12888 1972 aaPredicted RBP5.6□□□□□ -1.51
SYNPO2-205ENST00000504178 K7EP34 96 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 CAMK2N2Q96S95 79 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 ARHGEF17Q96PE2 2063 aaPredicted RBP5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 SH2D6Q7Z4S9 175 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 FGF23Q9GZV9 251 aaPredicted RBP5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 LENEPQ9Y5L5 61 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 ETDCA0A1B0GVM5 59 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 BLCAPP62952 87 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 BOD1L2Q8IYS8 172 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 RSPO3Q9BXY4 272 aaPredicted RBP5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 SPANXA1Q9NS26 97 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 ANAPC1Q9H1A4 1944 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 IGLV11-55A0A075B6I3 123 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 F8W1H4 67 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 DAZ2Q13117 558 aaKnown RBP5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 BVES-AS1Q5T3Y7 98 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 DAZ4Q86SG3 579 aaKnown RBP5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 DAZ3Q9NR90 486 aaKnown RBP5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 ORMDL1Q9P0S3 153 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 IGLC2P0DOY2 106 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 IGLC3P0DOY3 106 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 C5orf38Q86SI9 138 aa5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 RPL39LQ96EH5 51 aaKnown RBP5.59□□□□□ -1.51
SYNPO2-205ENST00000504178 IGLV10-54A0A075B6I4 117 aa5.59□□□□□ -1.52
SYNPO2-205ENST00000504178 C15orf53Q8NAA6 179 aa5.59□□□□□ -1.52
SYNPO2-205ENST00000504178 MPDZO75970 2070 aa5.59□□□□□ -1.52
SYNPO2-205ENST00000504178 K7EMI3 77 aa5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 DAZAP2Q15038 168 aaPredicted RBP5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 MRPL36Q9P0J6 103 aaKnown RBP5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 KNTC1P50748 2209 aa5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 TRAV4A0A0B4J268 109 aa5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 IGLL1P15814 213 aa5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 C10orf91Q5T1B1 145 aa5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 PCNTO95613 3336 aa5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 A0A1W2PPM0 123 aa5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 COX7A2LO14548 114 aa5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 SIVA1O15304 175 aa5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 DOCK8Q8NF50 2099 aa5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 GATA1P15976 413 aaPredicted RBP5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 ESM1Q9NQ30 184 aa5.58□□□□□ -1.52
SYNPO2-205ENST00000504178 CACNA1GO43497 2377 aa5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 PRSS47A8MTI9 375 aa5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 K7EIM0 57 aa5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 MYCNOSP40205 109 aa5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 Q8N9W7 124 aa5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 LRRK1Q38SD2 2015 aa5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 C2orf70A6NJV1 201 aa5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 NCR3O14931 201 aa5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 KIF26AQ9ULI4 1882 aaPredicted RBP5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 COX7B2Q8TF08 81 aa5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 KLK5Q9Y337 293 aaPredicted RBP5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 WI2-2373I1.2A0A1W2PRP0 233 aa5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 ZFP36P26651 326 aaKnown RBP5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 NDUFS6O75380 124 aaKnown RBP5.57□□□□□ -1.52
SYNPO2-205ENST00000504178 C12orf74Q32Q52 190 aa5.56□□□□□ -1.52
SYNPO2-205ENST00000504178 Q8NFD4 153 aa5.56□□□□□ -1.52
SYNPO2-205ENST00000504178 MAJINQ3KP22 176 aa5.56□□□□□ -1.52
SYNPO2-205ENST00000504178 TRACP01848 142 aa5.56□□□□□ -1.52
SYNPO2-205ENST00000504178 AMTNQ6UX39 209 aa5.56□□□□□ -1.52
SYNPO2-205ENST00000504178 HHLA3Q9XRX5 114 aa5.56□□□□□ -1.52
SYNPO2-205ENST00000504178 CTSGP08311 255 aa5.56□□□□□ -1.52
SYNPO2-205ENST00000504178 BAALC-AS2P0C853 105 aa5.56□□□□□ -1.52
SYNPO2-205ENST00000504178 IFITM1P13164 125 aa5.56□□□□□ -1.52
SYNPO2-205ENST00000504178 UBE2AP49459 152 aa5.56□□□□□ -1.52
SYNPO2-205ENST00000504178 ZFP2Q6ZN57 461 aa5.56□□□□□ -1.52
SYNPO2-205ENST00000504178 SPANXDQ9BXN6 97 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 SVILO95425 2214 aa5.55□□□□□ -1.52
SYNPO2-205ENST00000504178 NCKAP5O14513 1909 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms