RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 CMTM2Q8TAZ6 248 aa15.3■□□□□ 0.04
LSM6-203ENST00000503982 KRTAP17-1Q9BYP8 105 aa15.3■□□□□ 0.04
LSM6-203ENST00000503982 NKX6-2Q9C056 277 aaPredicted RBP15.3■□□□□ 0.04
LSM6-203ENST00000503982 DNAH11Q96DT5 4516 aa15.3■□□□□ 0.04
LSM6-203ENST00000503982 SPINK4O60575 86 aa15.29■□□□□ 0.04
LSM6-203ENST00000503982 C5orf17Q8NAS9 161 aa15.29■□□□□ 0.04
LSM6-203ENST00000503982 FAM213BQ8TBF2 198 aa15.29■□□□□ 0.04
LSM6-203ENST00000503982 PGPA6NDG6 321 aa15.28■□□□□ 0.04
LSM6-203ENST00000503982 DIRC3C9JPN6 131 aa15.28■□□□□ 0.04
LSM6-203ENST00000503982 PAX4O43316 350 aa15.28■□□□□ 0.04
LSM6-203ENST00000503982 LENEPQ9Y5L5 61 aa15.28■□□□□ 0.04
LSM6-203ENST00000503982 MUC4Q99102 2169 aa15.28■□□□□ 0.04
LSM6-203ENST00000503982 GGTLC3B5MD39 225 aa15.27■□□□□ 0.04
LSM6-203ENST00000503982 NKX2-5P52952 324 aaPredicted RBP15.27■□□□□ 0.04
LSM6-203ENST00000503982 TCEAL7Q9BRU2 100 aa15.27■□□□□ 0.04
LSM6-203ENST00000503982 NAGKQ9UJ70 344 aa15.27■□□□□ 0.04
LSM6-203ENST00000503982 MRPS16Q9Y3D3 137 aaKnown RBP15.27■□□□□ 0.04
LSM6-203ENST00000503982 A0A096LPF7 62 aa15.26■□□□□ 0.03
LSM6-203ENST00000503982 C16orf90A8MZG2 172 aa15.26■□□□□ 0.03
LSM6-203ENST00000503982 H2AFB1P0C5Y9 115 aa15.26■□□□□ 0.03
LSM6-203ENST00000503982 VSIG2Q96IQ7 327 aa15.26■□□□□ 0.03
LSM6-203ENST00000503982 ICOSQ9Y6W8 199 aa15.26■□□□□ 0.03
LSM6-203ENST00000503982 FAM74A7A6NL05 159 aa15.25■□□□□ 0.03
LSM6-203ENST00000503982 PPT1P50897 306 aa15.25■□□□□ 0.03
LSM6-203ENST00000503982 FGF8P55075 233 aaPredicted RBP15.25■□□□□ 0.03
LSM6-203ENST00000503982 FAM159AQ6UWV7 190 aa15.25■□□□□ 0.03
LSM6-203ENST00000503982 SFT2D1Q8WV19 159 aa15.25■□□□□ 0.03
LSM6-203ENST00000503982 C18orf15Q96N68 181 aa15.25■□□□□ 0.03
LSM6-203ENST00000503982 UPK3BQ9BT76 320 aa15.25■□□□□ 0.03
LSM6-203ENST00000503982 FBLL1A6NHQ2 334 aaKnown RBP15.24■□□□□ 0.03
LSM6-203ENST00000503982 TMEM183BQ1AE95 376 aa15.24■□□□□ 0.03
LSM6-203ENST00000503982 TMEM183AQ8IXX5 376 aa15.24■□□□□ 0.03
LSM6-203ENST00000503982 TRGV4A0A0C4DH28 118 aa15.23■□□□□ 0.03
LSM6-203ENST00000503982 TCRAP04437 139 aa15.23■□□□□ 0.03
LSM6-203ENST00000503982 SUMO1P63165 101 aaKnown RBP15.23■□□□□ 0.03
LSM6-203ENST00000503982 C8orf49Q96NF6 230 aa15.23■□□□□ 0.03
LSM6-203ENST00000503982 PRO0255Q9UI72 69 aa15.23■□□□□ 0.03
LSM6-203ENST00000503982 EPDR1Q9UM22 224 aa15.23■□□□□ 0.03
LSM6-203ENST00000503982 TRGV11A0A075B6L2 103 aa15.22■□□□□ 0.03
LSM6-203ENST00000503982 SLAQ13239 276 aa15.22■□□□□ 0.03
LSM6-203ENST00000503982 GOLT1AQ6ZVE7 132 aa15.22■□□□□ 0.03
LSM6-203ENST00000503982 IQCF2Q8IXL9 164 aa15.22■□□□□ 0.03
LSM6-203ENST00000503982 TEX46H3BTG2 121 aa15.21■□□□□ 0.03
LSM6-203ENST00000503982 HIST1H2BAQ96A08 127 aa15.21■□□□□ 0.03
LSM6-203ENST00000503982 KRTAP1-5Q9BYS1 174 aa15.21■□□□□ 0.03
LSM6-203ENST00000503982 MDFICQ9P1T7 246 aa15.21■□□□□ 0.03
LSM6-203ENST00000503982 HHLA3Q9XRX5 114 aa15.21■□□□□ 0.03
LSM6-203ENST00000503982 BOLA1Q9Y3E2 137 aa15.21■□□□□ 0.03
LSM6-203ENST00000503982 A0A1W2PPQ1 181 aa15.2■□□□□ 0.02
LSM6-203ENST00000503982 Q6AWC8 147 aa15.2■□□□□ 0.02
LSM6-203ENST00000503982 CYB561D1Q8N8Q1 229 aa15.2■□□□□ 0.02
LSM6-203ENST00000503982 TMEM75Q8N9X5 138 aa15.2■□□□□ 0.02
LSM6-203ENST00000503982 F6UZH7 168 aa15.19■□□□□ 0.02
LSM6-203ENST00000503982 K7EQM0 130 aa15.19■□□□□ 0.02
LSM6-203ENST00000503982 SIVA1O15304 175 aa15.19■□□□□ 0.02
LSM6-203ENST00000503982 LYPD6BQ8NI32 183 aa15.19■□□□□ 0.02
LSM6-203ENST00000503982 PCNPQ8WW12 178 aaKnown RBP15.19■□□□□ 0.02
LSM6-203ENST00000503982 SPXQ9BT56 116 aa15.19■□□□□ 0.02
LSM6-203ENST00000503982 MANBALQ9NQG1 85 aa15.19■□□□□ 0.02
LSM6-203ENST00000503982 IGLV2-11P01706 119 aa15.18■□□□□ 0.02
LSM6-203ENST00000503982 SFTA3P0C7M3 94 aa15.18■□□□□ 0.02
LSM6-203ENST00000503982 CRYBA4P53673 196 aa15.18■□□□□ 0.02
LSM6-203ENST00000503982 GNG5P63218 68 aa15.18■□□□□ 0.02
LSM6-203ENST00000503982 MRPL23Q16540 153 aaKnown RBP15.18■□□□□ 0.02
LSM6-203ENST00000503982 ALKAL2Q6UX46 152 aa15.18■□□□□ 0.02
LSM6-203ENST00000503982 SPATA12Q7Z6I5 190 aa15.18■□□□□ 0.02
LSM6-203ENST00000503982 TXNDC17Q9BRA2 123 aa15.18■□□□□ 0.02
LSM6-203ENST00000503982 TRAV21A0A0B4J279 112 aa15.17■□□□□ 0.02
LSM6-203ENST00000503982 NXPH4O95158 308 aa15.17■□□□□ 0.02
LSM6-203ENST00000503982 UBE2G2P60604 165 aa15.17■□□□□ 0.02
LSM6-203ENST00000503982 FHL2Q14192 279 aa15.17■□□□□ 0.02
LSM6-203ENST00000503982 NDFIP1Q9BT67 221 aa15.17■□□□□ 0.02
LSM6-203ENST00000503982 TREM1Q9NP99 234 aa15.17■□□□□ 0.02
LSM6-203ENST00000503982 PEX7O00628 323 aa15.16■□□□□ 0.02
LSM6-203ENST00000503982 PAGE4O60829 102 aa15.16■□□□□ 0.02
LSM6-203ENST00000503982 BLOC1S1P78537 153 aa15.16■□□□□ 0.02
LSM6-203ENST00000503982 PCLOQ9Y6V0 5065 aa15.16■□□□□ 0.02
LSM6-203ENST00000503982 TRAV8-1A0A0A6YYK1 113 aa15.15■□□□□ 0.02
LSM6-203ENST00000503982 TRBV6-1A0A0K0K1D8 114 aa15.15■□□□□ 0.02
LSM6-203ENST00000503982 SRIP30626 198 aa15.15■□□□□ 0.02
LSM6-203ENST00000503982 TAGLN2P37802 199 aaKnown RBP15.15■□□□□ 0.02
LSM6-203ENST00000503982 ZNF479Q96JC4 524 aa15.15■□□□□ 0.02
LSM6-203ENST00000503982 SGK494Q96LW2 274 aa15.15■□□□□ 0.02
LSM6-203ENST00000503982 GNRH2O43555 120 aa15.14■□□□□ 0.01
LSM6-203ENST00000503982 IFNA7P01567 189 aa15.14■□□□□ 0.01
LSM6-203ENST00000503982 LINC00315P59091 139 aa15.14■□□□□ 0.01
LSM6-203ENST00000503982 CCL20P78556 96 aa15.14■□□□□ 0.01
LSM6-203ENST00000503982 NEGR1Q7Z3B1 354 aa15.14■□□□□ 0.01
LSM6-203ENST00000503982 COX8CQ7Z4L0 72 aa15.14■□□□□ 0.01
LSM6-203ENST00000503982 OR4C5Q8NGB2 326 aa15.14■□□□□ 0.01
LSM6-203ENST00000503982 SDF2L1Q9HCN8 221 aa15.14■□□□□ 0.01
LSM6-203ENST00000503982 FLI1Q01543 452 aaPredicted RBP15.13■□□□□ 0.01
LSM6-203ENST00000503982 CST9LP1Q5W188 147 aa15.13■□□□□ 0.01
LSM6-203ENST00000503982 LYPD5Q6UWN5 251 aa15.13■□□□□ 0.01
LSM6-203ENST00000503982 TVP23CQ96ET8 276 aa15.13■□□□□ 0.01
LSM6-203ENST00000503982 PSG8Q9UQ74 426 aa15.13■□□□□ 0.01
LSM6-203ENST00000503982 M0R2P5 195 aa15.12■□□□□ 0.01
LSM6-203ENST00000503982 GYPEP15421 78 aa15.12■□□□□ 0.01
LSM6-203ENST00000503982 SAPCD1Q5SSQ6 148 aa15.12■□□□□ 0.01
LSM6-203ENST00000503982 TEX261Q6UWH6 196 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms