RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 Q9H8V8 135 aa11.26□□□□□ -0.61
SCLT1-204ENST00000503215 WFDC1Q9HC57 220 aa11.26□□□□□ -0.61
SCLT1-204ENST00000503215 ZNF492Q9P255 531 aa11.26□□□□□ -0.61
SCLT1-204ENST00000503215 TRGV1A0A0A0MS02 117 aa11.25□□□□□ -0.61
SCLT1-204ENST00000503215 SULT1A2P50226 295 aa11.25□□□□□ -0.61
SCLT1-204ENST00000503215 RANP62826 216 aaKnown RBP11.25□□□□□ -0.61
SCLT1-204ENST00000503215 ANXA2RQ3ZCQ2 193 aa11.25□□□□□ -0.61
SCLT1-204ENST00000503215 FFAR4Q5NUL3 377 aa11.25□□□□□ -0.61
SCLT1-204ENST00000503215 C6orf223Q8N319 242 aa11.25□□□□□ -0.61
SCLT1-204ENST00000503215 LINC00467Q9BRT7 94 aa11.25□□□□□ -0.61
SCLT1-204ENST00000503215 MRPL32Q9BYC8 188 aaKnown RBP11.25□□□□□ -0.61
SCLT1-204ENST00000503215 CYTL1Q9NRR1 136 aa11.25□□□□□ -0.61
SCLT1-204ENST00000503215 PCLOQ9Y6V0 5065 aa11.25□□□□□ -0.61
SCLT1-204ENST00000503215 TRGV2A0A075B6R0 118 aa11.24□□□□□ -0.61
SCLT1-204ENST00000503215 LINC00587B1AMM8 73 aa11.24□□□□□ -0.61
SCLT1-204ENST00000503215 OR7C2O60412 319 aa11.24□□□□□ -0.61
SCLT1-204ENST00000503215 RAB5CP51148 216 aa11.24□□□□□ -0.61
SCLT1-204ENST00000503215 TMEM78Q5T7P6 136 aa11.24□□□□□ -0.61
SCLT1-204ENST00000503215 SPINK4O60575 86 aa11.23□□□□□ -0.61
SCLT1-204ENST00000503215 ZNF138P52744 262 aa11.23□□□□□ -0.61
SCLT1-204ENST00000503215 TCL1AP56279 114 aa11.23□□□□□ -0.61
SCLT1-204ENST00000503215 RHEBQ15382 184 aa11.23□□□□□ -0.61
SCLT1-204ENST00000503215 Q9H3A6 140 aa11.23□□□□□ -0.61
SCLT1-204ENST00000503215 KCNIP2Q9NS61 270 aa11.23□□□□□ -0.61
SCLT1-204ENST00000503215 A0A096LPF7 62 aa11.22□□□□□ -0.61
SCLT1-204ENST00000503215 C17orf112F2Z3M2 114 aa11.22□□□□□ -0.61
SCLT1-204ENST00000503215 IGHV3-53P01767 116 aa11.22□□□□□ -0.61
SCLT1-204ENST00000503215 RPL12P30050 165 aaKnown RBP11.22□□□□□ -0.61
SCLT1-204ENST00000503215 SNRPEP62304 92 aaKnown RBP11.22□□□□□ -0.61
SCLT1-204ENST00000503215 NIT2Q9NQR4 276 aa11.22□□□□□ -0.61
SCLT1-204ENST00000503215 MRPL16Q9NX20 251 aaKnown RBP11.22□□□□□ -0.61
SCLT1-204ENST00000503215 IGHV1OR15-1A0A075B7D0 117 aa11.21□□□□□ -0.61
SCLT1-204ENST00000503215 H3BNG1 76 aa11.21□□□□□ -0.61
SCLT1-204ENST00000503215 UBE2L3P68036 154 aaKnown RBP11.21□□□□□ -0.61
SCLT1-204ENST00000503215 MUC21Q5SSG8 566 aa11.21□□□□□ -0.61
SCLT1-204ENST00000503215 HIST1H2BAQ96A08 127 aa11.21□□□□□ -0.61
SCLT1-204ENST00000503215 C18orf15Q96N68 181 aa11.21□□□□□ -0.61
SCLT1-204ENST00000503215 SFTA3P0C7M3 94 aa11.2□□□□□ -0.62
SCLT1-204ENST00000503215 SCGB1C1Q8TD33 95 aa11.2□□□□□ -0.62
SCLT1-204ENST00000503215 KRTAP4-5Q9BYR2 181 aa11.2□□□□□ -0.62
SCLT1-204ENST00000503215 DIRC3C9JPN6 131 aa11.19□□□□□ -0.62
SCLT1-204ENST00000503215 IFNA5P01569 189 aa11.19□□□□□ -0.62
SCLT1-204ENST00000503215 RAB2AP61019 212 aa11.19□□□□□ -0.62
SCLT1-204ENST00000503215 LBHQ53QV2 105 aaPredicted RBP11.19□□□□□ -0.62
SCLT1-204ENST00000503215 IBA57Q5T440 356 aaKnown RBP11.19□□□□□ -0.62
SCLT1-204ENST00000503215 TMED6Q8WW62 240 aa11.19□□□□□ -0.62
SCLT1-204ENST00000503215 UPK3BQ9BT76 320 aa11.19□□□□□ -0.62
SCLT1-204ENST00000503215 MDFICQ9P1T7 246 aa11.19□□□□□ -0.62
SCLT1-204ENST00000503215 MRPS16Q9Y3D3 137 aaKnown RBP11.19□□□□□ -0.62
SCLT1-204ENST00000503215 RYR1P21817 5038 aa11.19□□□□□ -0.62
SCLT1-204ENST00000503215 CSN1S1P47710 185 aa11.18□□□□□ -0.62
SCLT1-204ENST00000503215 ZNF266Q14584 549 aa11.18□□□□□ -0.62
SCLT1-204ENST00000503215 RBAKDNA6NC62 111 aa11.17□□□□□ -0.62
SCLT1-204ENST00000503215 HMGB3O15347 200 aaKnown RBP11.17□□□□□ -0.62
SCLT1-204ENST00000503215 SEC11BP0C7V7 166 aa11.17□□□□□ -0.62
SCLT1-204ENST00000503215 RAB5AP20339 215 aa11.17□□□□□ -0.62
SCLT1-204ENST00000503215 KHDC3LQ587J8 217 aa11.17□□□□□ -0.62
SCLT1-204ENST00000503215 LYPD1Q8N2G4 141 aa11.17□□□□□ -0.62
SCLT1-204ENST00000503215 TRBV7-9A0A0J9YWB2 115 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 PGPA6NDG6 321 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 C16orf90A8MZG2 172 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 PAX4O43316 350 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 FABP9Q0Z7S8 132 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 FHL2Q14192 279 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 C8orf49Q96NF6 230 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 RPH3ALQ9UNE2 315 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 LRP1BQ9NZR2 4599 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 HSPG2P98160 4391 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 TAS2R45P59539 299 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 SRSF3P84103 164 aaKnown RBP11.16□□□□□ -0.62
SCLT1-204ENST00000503215 TVP23CQ96ET8 276 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 OTORQ9NRC9 128 aa11.16□□□□□ -0.62
SCLT1-204ENST00000503215 TRAV8-1A0A0A6YYK1 113 aa11.15□□□□□ -0.63
SCLT1-204ENST00000503215 C7orf77A4D0Y5 90 aa11.15□□□□□ -0.63
SCLT1-204ENST00000503215 CRYBA4P53673 196 aa11.15□□□□□ -0.63
SCLT1-204ENST00000503215 RAB4BP61018 213 aa11.15□□□□□ -0.63
SCLT1-204ENST00000503215 GNG5P63218 68 aa11.15□□□□□ -0.63
SCLT1-204ENST00000503215 ZNF415Q09FC8 603 aa11.15□□□□□ -0.63
SCLT1-204ENST00000503215 TMEM183BQ1AE95 376 aa11.15□□□□□ -0.63
SCLT1-204ENST00000503215 ACOT6Q3I5F7 207 aaPredicted RBP11.15□□□□□ -0.63
SCLT1-204ENST00000503215 Q6AWC8 147 aa11.15□□□□□ -0.63
SCLT1-204ENST00000503215 TMEM183AQ8IXX5 376 aa11.15□□□□□ -0.63
SCLT1-204ENST00000503215 RPS10P5Q9NQ39 176 aa11.15□□□□□ -0.63
SCLT1-204ENST00000503215 A0A087WWC5 75 aa11.14□□□□□ -0.63
SCLT1-204ENST00000503215 BORCS7-ASMTA0A0B4J1R7 106 aa11.14□□□□□ -0.63
SCLT1-204ENST00000503215 GNRH2O43555 120 aa11.14□□□□□ -0.63
SCLT1-204ENST00000503215 PPT1P50897 306 aa11.14□□□□□ -0.63
SCLT1-204ENST00000503215 TTC32Q5I0X7 151 aa11.14□□□□□ -0.63
SCLT1-204ENST00000503215 GOLT1AQ6ZVE7 132 aa11.14□□□□□ -0.63
SCLT1-204ENST00000503215 SPATA12Q7Z6I5 190 aa11.14□□□□□ -0.63
SCLT1-204ENST00000503215 ZFP82Q8N141 532 aa11.14□□□□□ -0.63
SCLT1-204ENST00000503215 ZNF479Q96JC4 524 aa11.14□□□□□ -0.63
SCLT1-204ENST00000503215 NAGKQ9UJ70 344 aa11.14□□□□□ -0.63
SCLT1-204ENST00000503215 HHLA3Q9XRX5 114 aa11.14□□□□□ -0.63
SCLT1-204ENST00000503215 A0A1W2PPV4 95 aa11.13□□□□□ -0.63
SCLT1-204ENST00000503215 KRTAP10-2P60368 255 aa11.13□□□□□ -0.63
SCLT1-204ENST00000503215 OR10G4Q8NGN3 311 aa11.13□□□□□ -0.63
SCLT1-204ENST00000503215 OR10G9Q8NGN4 311 aa11.13□□□□□ -0.63
SCLT1-204ENST00000503215 OR10G7Q8NGN6 311 aa11.13□□□□□ -0.63
SCLT1-204ENST00000503215 SGK494Q96LW2 274 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms