RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 TRAV6A0A075B6T7 132 aa9.7□□□□□ -0.86
SEC61A1-207ENST00000498837 NHLH2Q02577 135 aa9.7□□□□□ -0.86
SEC61A1-207ENST00000498837 TDRG1Q3Y452 100 aa9.7□□□□□ -0.86
SEC61A1-207ENST00000498837 SLC25A29Q8N8R3 303 aa9.7□□□□□ -0.86
SEC61A1-207ENST00000498837 DIRC3C9JPN6 131 aa9.69□□□□□ -0.86
SEC61A1-207ENST00000498837 LECT2O14960 151 aa9.69□□□□□ -0.86
SEC61A1-207ENST00000498837 PFN1P07737 140 aaKnown RBP9.69□□□□□ -0.86
SEC61A1-207ENST00000498837 LINC01620Q4KN68 170 aa9.69□□□□□ -0.86
SEC61A1-207ENST00000498837 Q8N3U1 123 aa9.69□□□□□ -0.86
SEC61A1-207ENST00000498837 LENEPQ9Y5L5 61 aa9.69□□□□□ -0.86
SEC61A1-207ENST00000498837 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.68□□□□□ -0.86
SEC61A1-207ENST00000498837 LYRM1O43325 122 aa9.68□□□□□ -0.86
SEC61A1-207ENST00000498837 OR7C2O60412 319 aa9.68□□□□□ -0.86
SEC61A1-207ENST00000498837 TCRBP04435 133 aa9.68□□□□□ -0.86
SEC61A1-207ENST00000498837 TYMSP04818 313 aa9.68□□□□□ -0.86
SEC61A1-207ENST00000498837 SYT8Q8NBV8 401 aa9.68□□□□□ -0.86
SEC61A1-207ENST00000498837 FBLL1A6NHQ2 334 aaKnown RBP9.67□□□□□ -0.86
SEC61A1-207ENST00000498837 KRTAP10-4P60372 401 aaPredicted RBP9.67□□□□□ -0.86
SEC61A1-207ENST00000498837 LELP1Q5T871 98 aa9.67□□□□□ -0.86
SEC61A1-207ENST00000498837 OR5C1Q8NGR4 320 aa9.67□□□□□ -0.86
SEC61A1-207ENST00000498837 HYLS1Q96M11 299 aa9.67□□□□□ -0.86
SEC61A1-207ENST00000498837 TM2D2Q9BX73 214 aa9.67□□□□□ -0.86
SEC61A1-207ENST00000498837 PKHD1L1Q86WI1 4243 aa9.66□□□□□ -0.86
SEC61A1-207ENST00000498837 IGHV3-73A0A0B4J1V6 119 aa9.66□□□□□ -0.86
SEC61A1-207ENST00000498837 LAGE3Q14657 143 aa9.66□□□□□ -0.86
SEC61A1-207ENST00000498837 DPPA3Q6W0C5 159 aa9.66□□□□□ -0.86
SEC61A1-207ENST00000498837 SCXQ7RTU7 201 aa9.66□□□□□ -0.86
SEC61A1-207ENST00000498837 TMED6Q8WW62 240 aa9.66□□□□□ -0.86
SEC61A1-207ENST00000498837 TVP23CQ96ET8 276 aa9.66□□□□□ -0.86
SEC61A1-207ENST00000498837 PRADC1Q9BSG0 188 aa9.66□□□□□ -0.86
SEC61A1-207ENST00000498837 RPH3ALQ9UNE2 315 aa9.66□□□□□ -0.86
SEC61A1-207ENST00000498837 BOLA1Q9Y3E2 137 aa9.66□□□□□ -0.86
SEC61A1-207ENST00000498837 F6UZH7 168 aa9.65□□□□□ -0.86
SEC61A1-207ENST00000498837 RS1O15537 224 aa9.65□□□□□ -0.86
SEC61A1-207ENST00000498837 UBE2L3P68036 154 aaKnown RBP9.65□□□□□ -0.86
SEC61A1-207ENST00000498837 CFAP126Q5VTH2 177 aa9.65□□□□□ -0.86
SEC61A1-207ENST00000498837 LINC00299Q6ZSB3 139 aa9.65□□□□□ -0.86
SEC61A1-207ENST00000498837 ATP6V0E2Q8NHE4 81 aa9.65□□□□□ -0.86
SEC61A1-207ENST00000498837 CCDC32Q9BV29 185 aa9.65□□□□□ -0.86
SEC61A1-207ENST00000498837 WDR61Q9GZS3 305 aaKnown RBP9.65□□□□□ -0.86
SEC61A1-207ENST00000498837 GTSF1LQ9H1H1 148 aa9.65□□□□□ -0.86
SEC61A1-207ENST00000498837 NUDT15Q9NV35 164 aa9.65□□□□□ -0.86
SEC61A1-207ENST00000498837 TRAV21A0A0B4J279 112 aa9.64□□□□□ -0.87
SEC61A1-207ENST00000498837 TRBV6-4A0A1B0GX49 114 aa9.64□□□□□ -0.87
SEC61A1-207ENST00000498837 EIF3GO75821 320 aaKnown RBP eCLIP9.64□□□□□ -0.87
SEC61A1-207ENST00000498837 RHOHQ15669 191 aa9.64□□□□□ -0.87
SEC61A1-207ENST00000498837 ZNF876PQ49A33 203 aa9.64□□□□□ -0.87
SEC61A1-207ENST00000498837 BAALCQ8WXS3 180 aa9.64□□□□□ -0.87
SEC61A1-207ENST00000498837 SDF2L1Q9HCN8 221 aa9.64□□□□□ -0.87
SEC61A1-207ENST00000498837 PGPA6NDG6 321 aa9.63□□□□□ -0.87
SEC61A1-207ENST00000498837 A6NHS1 94 aa9.63□□□□□ -0.87
SEC61A1-207ENST00000498837 GOLT1AQ6ZVE7 132 aa9.63□□□□□ -0.87
SEC61A1-207ENST00000498837 DAZ4Q86SG3 579 aaKnown RBP9.63□□□□□ -0.87
SEC61A1-207ENST00000498837 KCNS1Q96KK3 526 aa9.63□□□□□ -0.87
SEC61A1-207ENST00000498837 DAZ3Q9NR90 486 aaKnown RBP9.63□□□□□ -0.87
SEC61A1-207ENST00000498837 OR5AC2Q9NZP5 309 aa9.63□□□□□ -0.87
SEC61A1-207ENST00000498837 PLA2G2DQ9UNK4 145 aa9.63□□□□□ -0.87
SEC61A1-207ENST00000498837 TRAV8-3A0A0A6YYJ7 113 aa9.62□□□□□ -0.87
SEC61A1-207ENST00000498837 TRAV8-1A0A0A6YYK1 113 aa9.62□□□□□ -0.87
SEC61A1-207ENST00000498837 OXTP01178 125 aa9.62□□□□□ -0.87
SEC61A1-207ENST00000498837 H2AFB2P0C5Z0 115 aa9.62□□□□□ -0.87
SEC61A1-207ENST00000498837 ASB13Q8WXK3 278 aa9.62□□□□□ -0.87
SEC61A1-207ENST00000498837 NMES1Q9C002 83 aa9.62□□□□□ -0.87
SEC61A1-207ENST00000498837 TREM1Q9NP99 234 aa9.62□□□□□ -0.87
SEC61A1-207ENST00000498837 OTORQ9NRC9 128 aa9.62□□□□□ -0.87
SEC61A1-207ENST00000498837 KCNIP2Q9NS61 270 aa9.62□□□□□ -0.87
SEC61A1-207ENST00000498837 C11orf21Q9P2W6 132 aa9.62□□□□□ -0.87
SEC61A1-207ENST00000498837 PGPEP1LA6NFU8 196 aa9.61□□□□□ -0.87
SEC61A1-207ENST00000498837 C17orf112F2Z3M2 114 aa9.61□□□□□ -0.87
SEC61A1-207ENST00000498837 CIDEAO60543 219 aa9.61□□□□□ -0.87
SEC61A1-207ENST00000498837 SIX6O95475 246 aa9.61□□□□□ -0.87
SEC61A1-207ENST00000498837 KHDC3LQ587J8 217 aa9.61□□□□□ -0.87
SEC61A1-207ENST00000498837 FFAR4Q5NUL3 377 aa9.61□□□□□ -0.87
SEC61A1-207ENST00000498837 CMTM2Q8TAZ6 248 aa9.61□□□□□ -0.87
SEC61A1-207ENST00000498837 ATP5SQ99766 215 aa9.61□□□□□ -0.87
SEC61A1-207ENST00000498837 CHAC1Q9BUX1 264 aa9.61□□□□□ -0.87
SEC61A1-207ENST00000498837 RBFOX3A6NFN3 312 aa9.6□□□□□ -0.87
SEC61A1-207ENST00000498837 H0YIZ8 118 aa9.6□□□□□ -0.87
SEC61A1-207ENST00000498837 ZNF80P51504 273 aaPredicted RBP9.6□□□□□ -0.87
SEC61A1-207ENST00000498837 ZNF506Q5JVG8 444 aa9.6□□□□□ -0.87
SEC61A1-207ENST00000498837 CIRBP-AS1Q8TBR5 109 aa9.6□□□□□ -0.87
SEC61A1-207ENST00000498837 S100ZQ8WXG8 99 aa9.6□□□□□ -0.87
SEC61A1-207ENST00000498837 DNAJC30Q96LL9 226 aa9.6□□□□□ -0.87
SEC61A1-207ENST00000498837 SGK494Q96LW2 274 aa9.6□□□□□ -0.87
SEC61A1-207ENST00000498837 MBD2Q9UBB5 411 aa9.6□□□□□ -0.87
SEC61A1-207ENST00000498837 GNG5P63218 68 aa9.59□□□□□ -0.87
SEC61A1-207ENST00000498837 IFITM3Q01628 133 aa9.59□□□□□ -0.87
SEC61A1-207ENST00000498837 ASAH1Q13510 395 aa9.59□□□□□ -0.87
SEC61A1-207ENST00000498837 LRRC37A5PQ49AS3 106 aa9.59□□□□□ -0.87
SEC61A1-207ENST00000498837 C9orf85Q96MD7 179 aa9.59□□□□□ -0.87
SEC61A1-207ENST00000498837 Q9UF83 564 aa9.59□□□□□ -0.87
SEC61A1-207ENST00000498837 FAM240BA0A1B0GVZ2 78 aa9.58□□□□□ -0.88
SEC61A1-207ENST00000498837 GAGE12JA6NER3 117 aa9.58□□□□□ -0.88
SEC61A1-207ENST00000498837 GGTLC3B5MD39 225 aa9.58□□□□□ -0.88
SEC61A1-207ENST00000498837 MGST1P10620 155 aaKnown RBP9.58□□□□□ -0.88
SEC61A1-207ENST00000498837 TAS2R45P59539 299 aa9.58□□□□□ -0.88
SEC61A1-207ENST00000498837 GAGE1Q13065 139 aa9.58□□□□□ -0.88
SEC61A1-207ENST00000498837 GAGE4Q13068 117 aa9.58□□□□□ -0.88
SEC61A1-207ENST00000498837 GAGE5Q13069 117 aa9.58□□□□□ -0.88
SEC61A1-207ENST00000498837 GAGE13Q4V321 117 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms