RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 MSRB1Q9NZV6 116 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 LENEPQ9Y5L5 61 aa7.5□□□□□ -1.21
LSAMP-206ENST00000498645 A0A087WTM6 91 aa7.49□□□□□ -1.21
LSAMP-206ENST00000498645 TRAV4A0A0B4J268 109 aa7.49□□□□□ -1.21
LSAMP-206ENST00000498645 M0R2P5 195 aa7.49□□□□□ -1.21
LSAMP-206ENST00000498645 IQCF2Q8IXL9 164 aa7.49□□□□□ -1.21
LSAMP-206ENST00000498645 TMED6Q8WW62 240 aa7.49□□□□□ -1.21
LSAMP-206ENST00000498645 SGK494Q96LW2 274 aa7.49□□□□□ -1.21
LSAMP-206ENST00000498645 MARVELD1Q9BSK0 173 aa7.49□□□□□ -1.21
LSAMP-206ENST00000498645 WFDC1Q9HC57 220 aa7.49□□□□□ -1.21
LSAMP-206ENST00000498645 TREM1Q9NP99 234 aa7.49□□□□□ -1.21
LSAMP-206ENST00000498645 TRAV21A0A0B4J279 112 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 EPM2AB3EWF7 344 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 TYMSP04818 313 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 CRYGDP07320 174 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 PPT1P50897 306 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 DEFA1P59665 94 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 DEFA3P59666 94 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 TDRG1Q3Y452 100 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 PQLC2Q6ZP29 291 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 OR10G9Q8NGN4 311 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 OR10G7Q8NGN6 311 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 TVP23CQ96ET8 276 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 SDF2L1Q9HCN8 221 aa7.48□□□□□ -1.21
LSAMP-206ENST00000498645 ARL14EPLP0DKL9 152 aa7.47□□□□□ -1.21
LSAMP-206ENST00000498645 ASB13Q8WXK3 278 aa7.47□□□□□ -1.21
LSAMP-206ENST00000498645 IGHV3-73A0A0B4J1V6 119 aa7.46□□□□□ -1.22
LSAMP-206ENST00000498645 FBLL1A6NHQ2 334 aaKnown RBP7.46□□□□□ -1.22
LSAMP-206ENST00000498645 PSCAO43653 123 aa7.46□□□□□ -1.22
LSAMP-206ENST00000498645 CDC34P49427 236 aaPredicted RBP7.46□□□□□ -1.22
LSAMP-206ENST00000498645 KRTAP10-1P60331 282 aa7.46□□□□□ -1.22
LSAMP-206ENST00000498645 C10orf126Q8N4M7 172 aa7.46□□□□□ -1.22
LSAMP-206ENST00000498645 HSD17B11Q8NBQ5 300 aa7.46□□□□□ -1.22
LSAMP-206ENST00000498645 KCNS1Q96KK3 526 aa7.46□□□□□ -1.22
LSAMP-206ENST00000498645 NDFIP1Q9BT67 221 aa7.46□□□□□ -1.22
LSAMP-206ENST00000498645 K7EP13 123 aa7.45□□□□□ -1.22
LSAMP-206ENST00000498645 GATA1P15976 413 aaPredicted RBP7.45□□□□□ -1.22
LSAMP-206ENST00000498645 XGP55808 180 aa7.45□□□□□ -1.22
LSAMP-206ENST00000498645 SH2D6Q7Z4S9 175 aa7.45□□□□□ -1.22
LSAMP-206ENST00000498645 IGHV3-38A0A0C4DH36 116 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 K7EQM0 130 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 ZNF80P51504 273 aaPredicted RBP7.44□□□□□ -1.22
LSAMP-206ENST00000498645 HAMPP81172 84 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 ZNF876PQ49A33 203 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 ZFP69Q49AA0 526 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 OR10J3Q5JRS4 329 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 Q5VSD8 79 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 DMRTA1Q5VZB9 504 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 SLC25A29Q8N8R3 303 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 TMEM75Q8N9X5 138 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 FRZBQ92765 325 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 PRADC1Q9BSG0 188 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 Q9HAA7 133 aa7.44□□□□□ -1.22
LSAMP-206ENST00000498645 DMBT1Q9UGM3 2413 aaPredicted RBP7.43□□□□□ -1.22
LSAMP-206ENST00000498645 IGLV5-52A0A0A0MRZ9 124 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 TRAV8-6A0A0B4J262 113 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 A6NHS1 94 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 TAAR5O14804 337 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 GCGP01275 180 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 IGHV3-30P01768 117 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 IGHV3-33P01772 117 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 TCRAP04437 139 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 INAFM2P0DMQ5 153 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 IGHV3-30-3P0DP02 117 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 IGHV3-30-5P0DP03 117 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 GCSHP23434 173 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 GCHFRP30047 84 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 CFAP126Q5VTH2 177 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 DPPA3Q6W0C5 159 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 PRNTQ86SH4 94 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 ARL6IP6Q8N6S5 226 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 C5orf17Q8NAS9 161 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 RAB24Q969Q5 203 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 C11orf21Q9P2W6 132 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 PSG8Q9UQ74 426 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 ALG5Q9Y673 324 aa7.43□□□□□ -1.22
LSAMP-206ENST00000498645 SERTM2A0A1B0GWG4 89 aa7.42□□□□□ -1.22
LSAMP-206ENST00000498645 RS1O15537 224 aa7.42□□□□□ -1.22
LSAMP-206ENST00000498645 SMR3BP02814 79 aaPredicted RBP7.42□□□□□ -1.22
LSAMP-206ENST00000498645 PFN1P07737 140 aaKnown RBP7.42□□□□□ -1.22
LSAMP-206ENST00000498645 STAG3L2P0CL84 134 aa7.42□□□□□ -1.22
LSAMP-206ENST00000498645 STAG3L3P0CL85 134 aa7.42□□□□□ -1.22
LSAMP-206ENST00000498645 RHOHQ15669 191 aa7.42□□□□□ -1.22
LSAMP-206ENST00000498645 ZNF506Q5JVG8 444 aa7.42□□□□□ -1.22
LSAMP-206ENST00000498645 SH3BGRL3Q9H299 93 aa7.42□□□□□ -1.22
LSAMP-206ENST00000498645 HERC1Q15751 4861 aa7.42□□□□□ -1.22
LSAMP-206ENST00000498645 SRRM2Q9UQ35 2752 aaKnown RBP7.42□□□□□ -1.22
LSAMP-206ENST00000498645 PGPEP1LA6NFU8 196 aa7.41□□□□□ -1.22
LSAMP-206ENST00000498645 GGTLC3B5MD39 225 aa7.41□□□□□ -1.22
LSAMP-206ENST00000498645 ATP6V0CP27449 155 aa7.41□□□□□ -1.22
LSAMP-206ENST00000498645 TIRAPP58753 221 aa7.41□□□□□ -1.22
LSAMP-206ENST00000498645 SUMO1P63165 101 aaKnown RBP7.41□□□□□ -1.22
LSAMP-206ENST00000498645 FLI1Q01543 452 aaPredicted RBP7.41□□□□□ -1.22
LSAMP-206ENST00000498645 SMUG1Q53HV7 270 aa7.41□□□□□ -1.22
LSAMP-206ENST00000498645 LINC01556Q5JQF7 62 aa7.41□□□□□ -1.22
LSAMP-206ENST00000498645 CYB561D1Q8N8Q1 229 aa7.41□□□□□ -1.22
LSAMP-206ENST00000498645 OR2G3Q8NGZ4 309 aa7.41□□□□□ -1.22
LSAMP-206ENST00000498645 C9orf85Q96MD7 179 aa7.41□□□□□ -1.22
LSAMP-206ENST00000498645 TRBV6-4A0A1B0GX49 114 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms