RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 STX12Q86Y82 276 aa9.19□□□□□ -0.94
CCDC58-207ENST00000498466 SLC25A29Q8N8R3 303 aa9.19□□□□□ -0.94
CCDC58-207ENST00000498466 PHYHIPLQ96FC7 376 aa9.19□□□□□ -0.94
CCDC58-207ENST00000498466 PRADC1Q9BSG0 188 aa9.19□□□□□ -0.94
CCDC58-207ENST00000498466 PAXXQ9BUH6 204 aa9.19□□□□□ -0.94
CCDC58-207ENST00000498466 NPCDR1Q9BY65 106 aa9.19□□□□□ -0.94
CCDC58-207ENST00000498466 IGSF23A1L1A6 192 aa9.18□□□□□ -0.94
CCDC58-207ENST00000498466 C5orf51A6NDU8 294 aa9.18□□□□□ -0.94
CCDC58-207ENST00000498466 RANP62826 216 aaKnown RBP9.18□□□□□ -0.94
CCDC58-207ENST00000498466 FXYD5Q96DB9 178 aa9.18□□□□□ -0.94
CCDC58-207ENST00000498466 CHAC1Q9BUX1 264 aa9.18□□□□□ -0.94
CCDC58-207ENST00000498466 C11orf1Q9H5F2 150 aa9.18□□□□□ -0.94
CCDC58-207ENST00000498466 LYRM2Q9NU23 88 aaPredicted RBP9.18□□□□□ -0.94
CCDC58-207ENST00000498466 TRAV8-3A0A0A6YYJ7 113 aa9.17□□□□□ -0.94
CCDC58-207ENST00000498466 RBFOX3A6NFN3 312 aa9.17□□□□□ -0.94
CCDC58-207ENST00000498466 CENPXA8MT69 81 aa9.17□□□□□ -0.94
CCDC58-207ENST00000498466 S100A10P60903 97 aa9.17□□□□□ -0.94
CCDC58-207ENST00000498466 RHOHQ15669 191 aa9.17□□□□□ -0.94
CCDC58-207ENST00000498466 ATP6V1FQ16864 119 aa9.17□□□□□ -0.94
CCDC58-207ENST00000498466 SPANXN2Q5MJ10 180 aa9.17□□□□□ -0.94
CCDC58-207ENST00000498466 Q8N3U1 123 aa9.17□□□□□ -0.94
CCDC58-207ENST00000498466 TMEM252Q8N6L7 170 aa9.17□□□□□ -0.94
CCDC58-207ENST00000498466 BAALCQ8WXS3 180 aa9.17□□□□□ -0.94
CCDC58-207ENST00000498466 GTSF1LQ9H1H1 148 aa9.17□□□□□ -0.94
CCDC58-207ENST00000498466 LENEPQ9Y5L5 61 aa9.17□□□□□ -0.94
CCDC58-207ENST00000498466 TYMSP04818 313 aa9.16□□□□□ -0.94
CCDC58-207ENST00000498466 BTCP35070 178 aa9.16□□□□□ -0.94
CCDC58-207ENST00000498466 ASAH1Q13510 395 aa9.16□□□□□ -0.94
CCDC58-207ENST00000498466 ATP6V0E2Q8NHE4 81 aa9.16□□□□□ -0.94
CCDC58-207ENST00000498466 CIRBP-AS1Q8TBR5 109 aa9.16□□□□□ -0.94
CCDC58-207ENST00000498466 PKHD1L1Q86WI1 4243 aa9.15□□□□□ -0.94
CCDC58-207ENST00000498466 IGHV3-73A0A0B4J1V6 119 aa9.15□□□□□ -0.94
CCDC58-207ENST00000498466 TRBV6-4A0A1B0GX49 114 aa9.15□□□□□ -0.94
CCDC58-207ENST00000498466 DIRC3C9JPN6 131 aa9.15□□□□□ -0.94
CCDC58-207ENST00000498466 RS1O15537 224 aa9.15□□□□□ -0.94
CCDC58-207ENST00000498466 OR7C2O60412 319 aa9.15□□□□□ -0.94
CCDC58-207ENST00000498466 ACOT6Q3I5F7 207 aaPredicted RBP9.15□□□□□ -0.94
CCDC58-207ENST00000498466 THAP6Q8TBB0 222 aa9.15□□□□□ -0.94
CCDC58-207ENST00000498466 ATP5SQ99766 215 aa9.15□□□□□ -0.94
CCDC58-207ENST00000498466 SDF2L1Q9HCN8 221 aa9.15□□□□□ -0.94
CCDC58-207ENST00000498466 TRAV21A0A0B4J279 112 aa9.14□□□□□ -0.95
CCDC58-207ENST00000498466 ZNF876PQ49A33 203 aa9.14□□□□□ -0.95
CCDC58-207ENST00000498466 TOR2AQ5JU69 321 aa9.14□□□□□ -0.95
CCDC58-207ENST00000498466 CFAP126Q5VTH2 177 aa9.14□□□□□ -0.95
CCDC58-207ENST00000498466 DAZ4Q86SG3 579 aaKnown RBP9.14□□□□□ -0.95
CCDC58-207ENST00000498466 C2orf50Q96LR7 162 aa9.14□□□□□ -0.95
CCDC58-207ENST00000498466 HYLS1Q96M11 299 aa9.14□□□□□ -0.95
CCDC58-207ENST00000498466 DAZ3Q9NR90 486 aaKnown RBP9.14□□□□□ -0.95
CCDC58-207ENST00000498466 COX11Q9Y6N1 276 aa9.14□□□□□ -0.95
CCDC58-207ENST00000498466 GGTLC3B5MD39 225 aa9.13□□□□□ -0.95
CCDC58-207ENST00000498466 F6UZH7 168 aa9.13□□□□□ -0.95
CCDC58-207ENST00000498466 CIDEAO60543 219 aa9.13□□□□□ -0.95
CCDC58-207ENST00000498466 IGLV2-8P01709 118 aa9.13□□□□□ -0.95
CCDC58-207ENST00000498466 UBE2L3P68036 154 aaKnown RBP9.13□□□□□ -0.95
CCDC58-207ENST00000498466 RAB32Q13637 225 aa9.13□□□□□ -0.95
CCDC58-207ENST00000498466 CNPY1Q3B7I2 92 aa9.13□□□□□ -0.95
CCDC58-207ENST00000498466 Q8N976 141 aa9.13□□□□□ -0.95
CCDC58-207ENST00000498466 TMED6Q8WW62 240 aa9.13□□□□□ -0.95
CCDC58-207ENST00000498466 KCNS1Q96KK3 526 aa9.13□□□□□ -0.95
CCDC58-207ENST00000498466 RPH3ALQ9UNE2 315 aa9.13□□□□□ -0.95
CCDC58-207ENST00000498466 DPPA3Q6W0C5 159 aa9.12□□□□□ -0.95
CCDC58-207ENST00000498466 ASB13Q8WXK3 278 aa9.12□□□□□ -0.95
CCDC58-207ENST00000498466 SH3BGRL3Q9H299 93 aa9.12□□□□□ -0.95
CCDC58-207ENST00000498466 CCDC160A6NGH7 325 aa9.11□□□□□ -0.95
CCDC58-207ENST00000498466 MGST1P10620 155 aaKnown RBP9.11□□□□□ -0.95
CCDC58-207ENST00000498466 RPL37AP61513 92 aaKnown RBP9.11□□□□□ -0.95
CCDC58-207ENST00000498466 NHLH2Q02577 135 aa9.11□□□□□ -0.95
CCDC58-207ENST00000498466 OR5C1Q8NGR4 320 aa9.11□□□□□ -0.95
CCDC58-207ENST00000498466 CMTM2Q8TAZ6 248 aa9.11□□□□□ -0.95
CCDC58-207ENST00000498466 RMI2Q96E14 147 aa9.11□□□□□ -0.95
CCDC58-207ENST00000498466 SEC22CQ9BRL7 303 aa9.11□□□□□ -0.95
CCDC58-207ENST00000498466 KCNIP2Q9NS61 270 aa9.11□□□□□ -0.95
CCDC58-207ENST00000498466 IGKV2D-24A0A075B6R9 120 aa9.1□□□□□ -0.95
CCDC58-207ENST00000498466 RNF222A6NCQ9 220 aa9.1□□□□□ -0.95
CCDC58-207ENST00000498466 NMES1Q9C002 83 aa9.1□□□□□ -0.95
CCDC58-207ENST00000498466 TREM1Q9NP99 234 aa9.1□□□□□ -0.95
CCDC58-207ENST00000498466 TRAV6A0A075B6T7 132 aa9.09□□□□□ -0.95
CCDC58-207ENST00000498466 PGPA6NDG6 321 aa9.09□□□□□ -0.95
CCDC58-207ENST00000498466 GAGE12JA6NER3 117 aa9.09□□□□□ -0.95
CCDC58-207ENST00000498466 GAGE1Q13065 139 aa9.09□□□□□ -0.95
CCDC58-207ENST00000498466 GAGE4Q13068 117 aa9.09□□□□□ -0.95
CCDC58-207ENST00000498466 GAGE5Q13069 117 aa9.09□□□□□ -0.95
CCDC58-207ENST00000498466 GAGE13Q4V321 117 aa9.09□□□□□ -0.95
CCDC58-207ENST00000498466 GOLT1AQ6ZVE7 132 aa9.09□□□□□ -0.95
CCDC58-207ENST00000498466 TVP23CQ96ET8 276 aa9.09□□□□□ -0.95
CCDC58-207ENST00000498466 OTORQ9NRC9 128 aa9.09□□□□□ -0.95
CCDC58-207ENST00000498466 URGCP-MRPS24S4R325 110 aa9.09□□□□□ -0.95
CCDC58-207ENST00000498466 TRAV8-1A0A0A6YYK1 113 aa9.08□□□□□ -0.96
CCDC58-207ENST00000498466 C17orf112F2Z3M2 114 aa9.08□□□□□ -0.96
CCDC58-207ENST00000498466 HNRNPA3P51991 378 aaKnown RBP9.08□□□□□ -0.96
CCDC58-207ENST00000498466 IL15RAQ13261 267 aa9.08□□□□□ -0.96
CCDC58-207ENST00000498466 KHDC3LQ587J8 217 aa9.08□□□□□ -0.96
CCDC58-207ENST00000498466 ZNF506Q5JVG8 444 aa9.08□□□□□ -0.96
CCDC58-207ENST00000498466 FAM74A1Q5RGS3 127 aa9.08□□□□□ -0.96
CCDC58-207ENST00000498466 DNAJC30Q96LL9 226 aa9.08□□□□□ -0.96
CCDC58-207ENST00000498466 SDHCQ99643 169 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-207ENST00000498466 WDR61Q9GZS3 305 aaKnown RBP9.08□□□□□ -0.96
CCDC58-207ENST00000498466 RNF213Q63HN8 5207 aa9.08□□□□□ -0.96
CCDC58-207ENST00000498466 A0A087WWC5 75 aa9.07□□□□□ -0.96
CCDC58-207ENST00000498466 PGPEP1LA6NFU8 196 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms