RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 LINC00477Q96M19 166 aa11.52□□□□□ -0.57
CTDSP1-214ENST00000497677 IGKV2-40A0A087WW87 121 aaPredicted RBP11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 TRAV8-1A0A0A6YYK1 113 aa11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 TRBV7-9A0A0J9YWB2 115 aa11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 ZNF705FA8MVS1 300 aaPredicted RBP11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 IGKV2D-40P01614 121 aaPredicted RBP11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 PFN1P07737 140 aaKnown RBP11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 ZNF705DP0CH99 300 aaPredicted RBP11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 ZNF705BP0CI00 300 aaPredicted RBP11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 NANOS2P60321 138 aaKnown RBP11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 ELOBQ15370 118 aa11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 C11orf45Q8TAV5 145 aa11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 YPEL4Q96NS1 127 aa11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 IL36BQ9NZH7 164 aa11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 LYSTQ99698 3801 aa11.51□□□□□ -0.57
CTDSP1-214ENST00000497677 ZNF705GA8MUZ8 300 aaPredicted RBP11.5□□□□□ -0.57
CTDSP1-214ENST00000497677 GATCO43716 136 aaKnown RBP11.5□□□□□ -0.57
CTDSP1-214ENST00000497677 P01737 135 aa11.5□□□□□ -0.57
CTDSP1-214ENST00000497677 ZNF138P52744 262 aa11.5□□□□□ -0.57
CTDSP1-214ENST00000497677 NHLRC2Q8NBF2 726 aa11.5□□□□□ -0.57
CTDSP1-214ENST00000497677 PHLDA1Q8WV24 401 aaPredicted RBP11.5□□□□□ -0.57
CTDSP1-214ENST00000497677 SGK494Q96LW2 274 aa11.5□□□□□ -0.57
CTDSP1-214ENST00000497677 NEU1Q99519 415 aa11.5□□□□□ -0.57
CTDSP1-214ENST00000497677 V9GYV3 84 aa11.5□□□□□ -0.57
CTDSP1-214ENST00000497677 C19orf71A6NCJ1 209 aa11.49□□□□□ -0.57
CTDSP1-214ENST00000497677 NUPR2A6NF83 97 aa11.49□□□□□ -0.57
CTDSP1-214ENST00000497677 SMUG1Q53HV7 270 aa11.49□□□□□ -0.57
CTDSP1-214ENST00000497677 C1orf158Q8N1D5 194 aa11.49□□□□□ -0.57
CTDSP1-214ENST00000497677 NUDT10Q8NFP7 164 aa11.49□□□□□ -0.57
CTDSP1-214ENST00000497677 NUDT11Q96G61 164 aa11.49□□□□□ -0.57
CTDSP1-214ENST00000497677 VGLL1Q99990 258 aa11.49□□□□□ -0.57
CTDSP1-214ENST00000497677 PYGO2Q9BRQ0 406 aa11.49□□□□□ -0.57
CTDSP1-214ENST00000497677 RNASE7Q9H1E1 156 aaKnown RBP11.49□□□□□ -0.57
CTDSP1-214ENST00000497677 FAM231BA6NCW3 169 aa11.48□□□□□ -0.57
CTDSP1-214ENST00000497677 A8MWL6 223 aa11.48□□□□□ -0.57
CTDSP1-214ENST00000497677 NPIPB6E9PJ23 425 aa11.48□□□□□ -0.57
CTDSP1-214ENST00000497677 DUSP14O95147 198 aaKnown RBP11.48□□□□□ -0.57
CTDSP1-214ENST00000497677 PRB4P10163 310 aaPredicted RBP11.48□□□□□ -0.57
CTDSP1-214ENST00000497677 RAB5AP20339 215 aa11.48□□□□□ -0.57
CTDSP1-214ENST00000497677 FAM162BQ5T6X4 162 aa11.48□□□□□ -0.57
CTDSP1-214ENST00000497677 PRR27Q6MZM9 219 aa11.48□□□□□ -0.57
CTDSP1-214ENST00000497677 OR8A1Q8NGG7 326 aa11.48□□□□□ -0.57
CTDSP1-214ENST00000497677 RPP21Q9H633 154 aaKnown RBP11.48□□□□□ -0.57
CTDSP1-214ENST00000497677 URGCP-MRPS24S4R325 110 aa11.48□□□□□ -0.57
CTDSP1-214ENST00000497677 XKRY2A2RUG3 117 aa11.47□□□□□ -0.57
CTDSP1-214ENST00000497677 PRAC2D3DTV9 90 aa11.47□□□□□ -0.57
CTDSP1-214ENST00000497677 CRXO43186 299 aaPredicted RBP11.47□□□□□ -0.57
CTDSP1-214ENST00000497677 ZC2HC1AQ96GY0 325 aa11.47□□□□□ -0.57
CTDSP1-214ENST00000497677 FAM210BQ96KR6 192 aa11.47□□□□□ -0.57
CTDSP1-214ENST00000497677 GFRA4Q9GZZ7 299 aa11.47□□□□□ -0.57
CTDSP1-214ENST00000497677 AGPAT4-IT1Q9H0P7 198 aa11.47□□□□□ -0.57
CTDSP1-214ENST00000497677 DNAH1Q9P2D7 4330 aa11.47□□□□□ -0.57
CTDSP1-214ENST00000497677 SMIM27A0A1W2PRY6 76 aa11.46□□□□□ -0.57
CTDSP1-214ENST00000497677 SMIM9A6NGZ8 99 aa11.46□□□□□ -0.57
CTDSP1-214ENST00000497677 RPS20P60866 119 aaKnown RBP11.46□□□□□ -0.57
CTDSP1-214ENST00000497677 COX19Q49B96 90 aa11.46□□□□□ -0.57
CTDSP1-214ENST00000497677 TSKUQ8WUA8 353 aa11.46□□□□□ -0.57
CTDSP1-214ENST00000497677 ODF3Q96PU9 254 aa11.46□□□□□ -0.57
CTDSP1-214ENST00000497677 CELA1Q9UNI1 258 aa11.46□□□□□ -0.57
CTDSP1-214ENST00000497677 IGHV3OR16-12A0A075B7B8 117 aa11.45□□□□□ -0.58
CTDSP1-214ENST00000497677 FABP5P3A8MUU1 101 aa11.45□□□□□ -0.58
CTDSP1-214ENST00000497677 M0R2Z0 102 aa11.45□□□□□ -0.58
CTDSP1-214ENST00000497677 TYMSP04818 313 aa11.45□□□□□ -0.58
CTDSP1-214ENST00000497677 HIST1H1AQ02539 215 aaPredicted RBP11.45□□□□□ -0.58
CTDSP1-214ENST00000497677 ERCC8Q13216 396 aa11.45□□□□□ -0.58
CTDSP1-214ENST00000497677 SPINK13Q1W4C9 94 aa11.45□□□□□ -0.58
CTDSP1-214ENST00000497677 NAT8BQ9UHF3 227 aa11.45□□□□□ -0.58
CTDSP1-214ENST00000497677 KLK5Q9Y337 293 aaPredicted RBP11.45□□□□□ -0.58
CTDSP1-214ENST00000497677 A0A1W2PPQ1 181 aa11.44□□□□□ -0.58
CTDSP1-214ENST00000497677 AMBPP02760 352 aa11.44□□□□□ -0.58
CTDSP1-214ENST00000497677 FAM3BP58499 235 aaPredicted RBP11.44□□□□□ -0.58
CTDSP1-214ENST00000497677 Q6AWC8 147 aa11.44□□□□□ -0.58
CTDSP1-214ENST00000497677 GOLT1BQ9Y3E0 138 aa11.44□□□□□ -0.58
CTDSP1-214ENST00000497677 TGIF2-C20orf24A0A0A6YYL0 155 aa11.43□□□□□ -0.58
CTDSP1-214ENST00000497677 C12orf74Q32Q52 190 aa11.43□□□□□ -0.58
CTDSP1-214ENST00000497677 RASL11AQ6T310 242 aa11.43□□□□□ -0.58
CTDSP1-214ENST00000497677 OR2D3Q8NGH3 330 aa11.43□□□□□ -0.58
CTDSP1-214ENST00000497677 Q8TAT8 98 aa11.43□□□□□ -0.58
CTDSP1-214ENST00000497677 C8orf49Q96NF6 230 aa11.43□□□□□ -0.58
CTDSP1-214ENST00000497677 ALMS1Q8TCU4 4167 aa11.42□□□□□ -0.58
CTDSP1-214ENST00000497677 HYDINQ4G0P3 5121 aa11.42□□□□□ -0.58
CTDSP1-214ENST00000497677 C1orf196B1AJZ1 125 aa11.42□□□□□ -0.58
CTDSP1-214ENST00000497677 SH2D1AO60880 128 aa11.42□□□□□ -0.58
CTDSP1-214ENST00000497677 CXCL1P09341 107 aa11.42□□□□□ -0.58
CTDSP1-214ENST00000497677 CRISP2P16562 243 aa11.42□□□□□ -0.58
CTDSP1-214ENST00000497677 RPS10P46783 165 aaKnown RBP11.42□□□□□ -0.58
CTDSP1-214ENST00000497677 Q6ZTC4 211 aa11.42□□□□□ -0.58
CTDSP1-214ENST00000497677 LINC00476Q8WZB0 136 aa11.42□□□□□ -0.58
CTDSP1-214ENST00000497677 FAM19A4Q96LR4 140 aa11.42□□□□□ -0.58
CTDSP1-214ENST00000497677 TRAV12-2A0A075B6T6 113 aa11.41□□□□□ -0.58
CTDSP1-214ENST00000497677 TMEM189A5PLL7 270 aa11.41□□□□□ -0.58
CTDSP1-214ENST00000497677 PRM2P04554 102 aa11.41□□□□□ -0.58
CTDSP1-214ENST00000497677 TSPOP30536 169 aa11.41□□□□□ -0.58
CTDSP1-214ENST00000497677 LEPP41159 167 aa11.41□□□□□ -0.58
CTDSP1-214ENST00000497677 CRIP1P50238 77 aa11.41□□□□□ -0.58
CTDSP1-214ENST00000497677 FOXA3P55318 350 aaPredicted RBP11.41□□□□□ -0.58
CTDSP1-214ENST00000497677 ATP5L2Q7Z4Y8 100 aa11.41□□□□□ -0.58
CTDSP1-214ENST00000497677 INSP01308 110 aa11.4□□□□□ -0.58
CTDSP1-214ENST00000497677 RAB5BP61020 215 aa11.4□□□□□ -0.58
CTDSP1-214ENST00000497677 KIR3DS1Q14943 382 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms