RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 RBX1P62877 108 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 RPL18Q07020 188 aaKnown RBP1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 SCGB2B2Q4G0G5 96 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 SPRNQ5BIV9 151 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 ZNF660Q6AZW8 331 aaPredicted RBP1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 VMO1Q7Z5L0 202 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 EXOC3-AS1Q8N2X6 119 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 STX19Q8N4C7 294 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 EIF4E3Q8N5X7 224 aaKnown RBP1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 RNF182Q8N6D2 247 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 ZNF439Q8NDP4 499 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 OR10K1Q8NGX5 313 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 ZNF675Q8TD23 568 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 DYDC1Q8WWB3 177 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 C11orf40Q8WZ69 217 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 DERL1Q9BUN8 251 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 C11orf68Q9H3H3 251 aaKnown RBP1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 TMEM106BQ9NUM4 274 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 IL36BQ9NZH7 164 aa1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
CKS1BP2-201ENST00000497342 TRAV9-1A0A075B6T8 112 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 IRGMA1A4Y4 181 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 MEIS3P1A6NDR6 274 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 BUB1B-PAK6H3BSN5 160 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 LEPROTO15243 131 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 PSCAO43653 123 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 NDUFC2O95298 119 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 CRYZL1O95825 349 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 IFNA7P01567 189 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 ZNF705DP0CH99 300 aaPredicted RBP1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 ZNF728P0DKX0 622 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 GPX2P18283 190 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 HIST1H2BOP23527 126 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 CRABP2P29373 138 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 HIST1H2BBP33778 126 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 HIST1H2BDP58876 126 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 KRTAP10-5P60370 271 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 NCALDP61601 193 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 HIST1H2BCP62807 126 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 HBA1P69905 142 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 FLI1Q01543 452 aaPredicted RBP1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 PRB3Q04118 309 aaPredicted RBP1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 HIST2H2BEQ16778 126 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 FAM229BQ4G0N7 80 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 KRTAP5-3Q6L8H2 238 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 LCA10Q71F78 164 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 SH2D6Q7Z4S9 175 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 KTN1-AS1Q86SY8 53 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 C1orf64Q8NEQ6 169 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 OR8B3Q8NGG8 313 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 OR51T1Q8NGJ9 327 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 TERB2Q8NHR7 220 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 RPS4Y2Q8TD47 263 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 RBPMSQ93062 196 aaKnown RBP1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 HIST1H2BHQ93079 126 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 C12orf43Q96C57 262 aaKnown RBP1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 SLAMF6Q96DU3 332 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 OR8B2Q96RD0 313 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 HIST1H2BNQ99877 126 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 HIST1H2BMQ99879 126 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 ZNF2Q9BSG1 426 aaPredicted RBP1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 C8orf4Q9NR00 106 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 FUT9Q9Y231 359 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 CYSLTR1Q9Y271 337 aa1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 UTP11Q9Y3A2 253 aaKnown RBP1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 AMMECR1Q9Y4X0 333 aaPredicted RBP1.31□□□□□ -2.2
CKS1BP2-201ENST00000497342 IGKV2-28A0A075B6P5 120 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 IGLV3-32A0A0A0MS00 114 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 TRAV41A0A0B4J266 112 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 NBDYA0A0U1RRE5 68 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 LOC285095A0A1B0GVY8 99 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 MAP1LC3B2A6NCE7 125 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 ARRDC5A6NEK1 342 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 TSTD3H0UI37 97 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 OVOL1O14753 267 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 MRPL33O75394 65 aaKnown RBP1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 IFNA17P01571 189 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 IGKV2D-28P01615 120 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 IGLV1-51P01701 117 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 HMGN1P05114 100 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 CSN2P05814 226 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 UCHL1P09936 223 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 HRES1P13985 223 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 ZNF22P17026 224 aaPredicted RBP1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 LPAR6P43657 344 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 PIGPP57054 158 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 RWDD2BP57060 319 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 KLF3P57682 345 aaPredicted RBP1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 LINC00315P59091 139 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 KRTAP10-6P60371 365 aaPredicted RBP1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 CDC42P60953 191 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 RPL30P62888 115 aaKnown RBP1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 GNG5P63218 68 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 PLCXD2Q0VAA5 305 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 FOXF1Q12946 379 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 NNATQ16517 81 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 RRN3P1Q2M238 152 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 LINC01554Q52M75 96 aa1.3□□□□□ -2.2
CKS1BP2-201ENST00000497342 TMPPEQ6ZT21 453 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms