RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	ZNF415	Q09FC8	603 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	COX8C	Q7Z4L0	72 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	TMEM183A	Q8IXX5	376 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	NHLRC2	Q8NBF2	726 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	PCNP	Q8WW12	178 aa	Known RBP	5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	MRPL16	Q9NX20	251 aa	Known RBP	5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	KLK5	Q9Y337	293 aa	Predicted RBP	5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	CSMD3	Q7Z407	3707 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	TRGV11	A0A075B6L2	103 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	IGHV4-4	A0A075B6R2	117 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	TRGV1	A0A0A0MS02	117 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	IGKV3D-20	A0A0C4DH25	116 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	IGLL5	B9A064	214 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	SH2D1A	O60880	128 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	IFNA1	P01562	189 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	RPL35	P42766	123 aa	Known RBP	5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	TEX261	Q6UWH6	196 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	TXNDC17	Q9BRA2	123 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	MLST8	Q9BVC4	326 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	SDF2L1	Q9HCN8	221 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	VAX2	Q9UIW0	290 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	APLN	Q9ULZ1	77 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	ZFP30	Q9Y2G7	519 aa		5.67	□□□□□ -1.5
EFNA1-205	ENST00000497282	TRBV20OR9-2	A0A075B6H5	130 aa		5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	LCE6A	A0A183	80 aa		5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	IGLV2-8	P01709	118 aa		5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	ATP5G1	P05496	136 aa		5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	RNASE3	P12724	160 aa	Known RBP	5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	HOXA5	P20719	270 aa		5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	ZNF674	Q2M3X9	581 aa		5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	CENPW	Q5EE01	88 aa		5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	TMEM88	Q6PEY1	159 aa		5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	ZNF575	Q86XF7	245 aa		5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	LINC00476	Q8WZB0	136 aa		5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	KCNS1	Q96KK3	526 aa		5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	C18orf15	Q96N68	181 aa		5.66	□□□□□ -1.5
EFNA1-205	ENST00000497282	RAB19	A4D1S5	217 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	RBFOX3	A6NFN3	312 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	PGPEP1L	A6NFU8	196 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	FABP5P3	A8MUU1	101 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282		F5H768	121 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282		M0R036	132 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	PDE6D	O43924	150 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	S100A9	P06702	114 aa	Known RBP	5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	TAGLN2	P37802	199 aa	Known RBP	5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	LGALS9B	Q3B8N2	356 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	TOR2A	Q5JU69	321 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	ZNF506	Q5JVG8	444 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	FAM162B	Q5T6X4	162 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	BAGE2	Q86Y30	109 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	C9orf85	Q96MD7	179 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	FAM210A	Q96ND0	272 aa		5.65	□□□□□ -1.5
EFNA1-205	ENST00000497282	TRGV2	A0A075B6R0	118 aa		5.64	□□□□□ -1.51
EFNA1-205	ENST00000497282		B4DEV8	164 aa		5.64	□□□□□ -1.51
EFNA1-205	ENST00000497282	KRBOX1	C9JBD0	128 aa		5.64	□□□□□ -1.51
EFNA1-205	ENST00000497282	IGHV3-53	P01767	116 aa		5.64	□□□□□ -1.51
EFNA1-205	ENST00000497282	ORM1	P02763	201 aa		5.64	□□□□□ -1.51
EFNA1-205	ENST00000497282	RPL19	P84098	196 aa	Known RBP	5.64	□□□□□ -1.51
EFNA1-205	ENST00000497282	LINC01559	Q495D7	138 aa		5.64	□□□□□ -1.51
EFNA1-205	ENST00000497282	PRR27	Q6MZM9	219 aa		5.64	□□□□□ -1.51
EFNA1-205	ENST00000497282	POM121L12	Q8N7R1	296 aa		5.64	□□□□□ -1.51
EFNA1-205	ENST00000497282	SPX	Q9BT56	116 aa		5.64	□□□□□ -1.51
EFNA1-205	ENST00000497282	PARL	Q9H300	379 aa		5.64	□□□□□ -1.51
EFNA1-205	ENST00000497282	MED9	Q9NWA0	146 aa		5.64	□□□□□ -1.51
EFNA1-205	ENST00000497282	NACA	E9PAV3	2078 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282	MUC4	Q99102	2169 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282	TMSB15B	A0A087X1C1	80 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282	GRIFIN	A4D1Z8	144 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282		H3BVH4	76 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282		M0R2P5	195 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282	SFTA3	P0C7M3	94 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282	ASIP	P42127	132 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282	GNG4	P50150	75 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282	TCTA	P57738	103 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282	DNLZ	Q5SXM8	178 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282	RASL10A	Q92737	203 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282	ZNF479	Q96JC4	524 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282	FAM210B	Q96KR6	192 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282	NDUFAF3	Q9BU61	184 aa		5.63	□□□□□ -1.51
EFNA1-205	ENST00000497282		A0A0J9YY99	117 aa		5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	C19orf71	A6NCJ1	209 aa		5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282		C9JCJ5	164 aa		5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	TMEM250	H0YL14	139 aa		5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282		K7EN84	100 aa		5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	LY6G6C	O95867	125 aa		5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	SRP19	P09132	144 aa	Known RBP	5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	MGST1	P10620	155 aa	Known RBP	5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	SRSF3	P84103	164 aa	Known RBP	5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	IFITM2	Q01629	132 aa		5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	OR5I1	Q13606	314 aa		5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	FHL2	Q14192	279 aa		5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	SMIM12	Q96EX1	92 aa		5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	VSIG2	Q96IQ7	327 aa		5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	EIF5A2	Q9GZV4	153 aa	Known RBP	5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	IL36B	Q9NZH7	164 aa		5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	DYNC2H1	Q8NCM8	4307 aa	Known RBP	5.62	□□□□□ -1.51
EFNA1-205	ENST00000497282	TRAV26-1	A0A087WT03	109 aa		5.61	□□□□□ -1.51
EFNA1-205	ENST00000497282		C9JQL5	133 aa		5.61	□□□□□ -1.51
EFNA1-205	ENST00000497282	ARMS2	P0C7Q2	107 aa		5.61	□□□□□ -1.51
EFNA1-205	ENST00000497282	S100A4	P26447	101 aa	Known RBP	5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms