RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 C14orf132Q9NPU4 83 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 NDUFB11Q9NX14 153 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 FLNBO75369 2602 aaKnown RBP2.37□□□□□ -2.03
SNX13-211ENST00000496855 USP9XQ93008 2570 aaPredicted RBP2.37□□□□□ -2.03
SNX13-211ENST00000496855 PRUNE2Q8WUY3 3088 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 ADGRB1O14514 1584 aa2.37□□□□□ -2.03
SNX13-211ENST00000496855 CROCC2H7BZ55 1655 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 ZC3H13Q5T200 1668 aaKnown RBP2.36□□□□□ -2.03
SNX13-211ENST00000496855 BRCA2P51587 3418 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 RANBP2P49792 3224 aaKnown RBP2.36□□□□□ -2.03
SNX13-211ENST00000496855 ZSWIM8A7E2V4 1837 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 A2ML1A8K2U0 1454 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 KIAA1549Q9HCM3 1950 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 TMEM131LA2VDJ0 1609 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 FNDC10F2Z333 226 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 C17orf112F2Z3M2 114 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 CCL25O15444 150 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 UBL3O95164 117 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 BAALC-AS2P0C853 105 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 AKAIN1P0CW23 69 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 PYYP10082 97 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 GUCA1AP43080 201 aaPredicted RBP2.36□□□□□ -2.03
SNX13-211ENST00000496855 MIC13Q5XKP0 118 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 Q6ZTI0 123 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 Q6ZUT4 128 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 PPP3R2Q96LZ3 170 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 TIAM1Q13009 1591 aa2.36□□□□□ -2.03
SNX13-211ENST00000496855 FASNP49327 2511 aaKnown RBP2.36□□□□□ -2.03
SNX13-211ENST00000496855 ASH1LQ9NR48 2969 aaKnown RBP2.36□□□□□ -2.03
SNX13-211ENST00000496855 ZNF292O60281 2723 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 ABCA9Q8IUA7 1624 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 LOC107986453A0A1B0GWG9 222 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 SDHAF1A6NFY7 115 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 LYRM1O43325 122 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 CDK6Q00534 326 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 CIRBPQ14011 172 aaKnown RBP2.35□□□□□ -2.03
SNX13-211ENST00000496855 SPANXN5Q5MJ07 72 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 OR5AK2Q8NH90 309 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 Q8TAT8 98 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 TTC28Q96AY4 2481 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 CFAP54Q96N23 3096 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 ABCA3Q99758 1704 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 PDCD10Q9BUL8 212 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 SNRNP25Q9BV90 132 aaKnown RBP2.35□□□□□ -2.03
SNX13-211ENST00000496855 TIMM21Q9BVV7 248 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 CCDC167Q9P0B6 97 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 MPC1Q9Y5U8 109 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 ABCC1P33527 1531 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.35□□□□□ -2.03
SNX13-211ENST00000496855 TULP4Q9NRJ4 1543 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 USP32Q8NFA0 1604 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 C5orf42Q9H799 3197 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 MICAL3Q7RTP6 2002 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 EPG5Q9HCE0 2579 aa2.35□□□□□ -2.03
SNX13-211ENST00000496855 A0A087WSZ3 146 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 C2orf70A6NJV1 201 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 BBIP1A8MTZ0 92 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 E7EUB6 86 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 TRACP01848 142 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 IGKV4-1P06312 121 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 CD2P06729 351 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 HIST1H1DP16402 221 aaKnown RBP2.34□□□□□ -2.03
SNX13-211ENST00000496855 DSCR4P56555 118 aaPredicted RBP2.34□□□□□ -2.03
SNX13-211ENST00000496855 BTG2P78543 158 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 MRPS10P82664 201 aaKnown RBP2.34□□□□□ -2.03
SNX13-211ENST00000496855 C3orf62Q6ZUJ4 267 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 CST11Q9H112 138 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 CHCHD2Q9Y6H1 151 aaPredicted RBP2.34□□□□□ -2.03
SNX13-211ENST00000496855 HEATR5BQ9P2D3 2071 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 MYH13Q9UKX3 1938 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 MYO9BQ13459 2157 aa2.34□□□□□ -2.03
SNX13-211ENST00000496855 TEP1Q99973 2627 aaKnown RBP2.34□□□□□ -2.04
SNX13-211ENST00000496855 KDM5AP29375 1690 aaKnown RBP2.34□□□□□ -2.04
SNX13-211ENST00000496855 AGLP35573 1532 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 TRAV12-2A0A075B6T6 113 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 M0R2P5 195 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 CKS2P33552 79 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 RPL26P61254 145 aaKnown RBP2.33□□□□□ -2.04
SNX13-211ENST00000496855 KRTAP26-1Q6PEX3 210 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 LINC00471Q8N535 108 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 CMTM2Q8TAZ6 248 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 LSM10Q969L4 123 aaKnown RBP2.33□□□□□ -2.04
SNX13-211ENST00000496855 SEC11CQ9BY50 192 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 CASP8AP2Q9UKL3 1982 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 MYH1P12882 1939 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 MGAMO43451 1857 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 RP1P56715 2156 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 COL24A1Q17RW2 1714 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 MARF1Q9Y4F3 1742 aaKnown RBP2.33□□□□□ -2.04
SNX13-211ENST00000496855 TRAV12-1A0A0B4J245 112 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 LOC107984156A0A0G2JMH3 177 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 ZCCHC23Q6ZST2 131 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 ARPINQ7Z6K5 226 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 ARL17AQ8IVW1 177 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 ZFP30Q9Y2G7 519 aa2.33□□□□□ -2.04
SNX13-211ENST00000496855 USP54Q70EL1 1684 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 MUC6Q6W4X9 2439 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 ABCC5O15440 1437 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 VPS8Q8N3P4 1428 aa2.32□□□□□ -2.04
SNX13-211ENST00000496855 ATP7AQ04656 1500 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms