RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ANXA2RQ3ZCQ2 193 aa15.7■□□□□ 0.1
C9orf3-222ENST00000496567 ZNF493Q6ZR52 646 aa15.7■□□□□ 0.1
C9orf3-222ENST00000496567 DAZAP1Q96EP5 407 aaKnown RBP15.7■□□□□ 0.1
C9orf3-222ENST00000496567 Q8NAQ8 132 aa15.7■□□□□ 0.1
C9orf3-222ENST00000496567 C16orf74Q96GX8 76 aa15.7■□□□□ 0.1
C9orf3-222ENST00000496567 NAT8Q9UHE5 227 aa15.7■□□□□ 0.1
C9orf3-222ENST00000496567 IGHV4-28A0A0C4DH34 117 aa15.69■□□□□ 0.1
C9orf3-222ENST00000496567 ORM1P02763 201 aa15.69■□□□□ 0.1
C9orf3-222ENST00000496567 PRM2P04554 102 aa15.69■□□□□ 0.1
C9orf3-222ENST00000496567 TMEM263Q8WUH6 116 aaKnown RBP15.69■□□□□ 0.1
C9orf3-222ENST00000496567 SDF2L1Q9HCN8 221 aa15.69■□□□□ 0.1
C9orf3-222ENST00000496567 C11orf21Q9P2W6 132 aa15.69■□□□□ 0.1
C9orf3-222ENST00000496567 TMEM189A5PLL7 270 aa15.68■□□□□ 0.1
C9orf3-222ENST00000496567 AZU1P20160 251 aa15.68■□□□□ 0.1
C9orf3-222ENST00000496567 LINC01551Q86U37 167 aa15.68■□□□□ 0.1
C9orf3-222ENST00000496567 U3KQK5 164 aa15.68■□□□□ 0.1
C9orf3-222ENST00000496567 TRGV11A0A075B6L2 103 aa15.67■□□□□ 0.1
C9orf3-222ENST00000496567 K7EN84 100 aa15.67■□□□□ 0.1
C9orf3-222ENST00000496567 OR5I1Q13606 314 aa15.67■□□□□ 0.1
C9orf3-222ENST00000496567 B4DEV8 164 aa15.66■□□□□ 0.1
C9orf3-222ENST00000496567 LINC01559Q495D7 138 aa15.66■□□□□ 0.1
C9orf3-222ENST00000496567 RNASE8Q8TDE3 154 aaKnown RBP15.66■□□□□ 0.1
C9orf3-222ENST00000496567 C11orf68Q9H3H3 251 aaKnown RBP15.66■□□□□ 0.1
C9orf3-222ENST00000496567 C19orf71A6NCJ1 209 aa15.66■□□□□ 0.1
C9orf3-222ENST00000496567 IBA57Q5T440 356 aaKnown RBP15.66■□□□□ 0.1
C9orf3-222ENST00000496567 SVBPQ8N300 66 aa15.66■□□□□ 0.1
C9orf3-222ENST00000496567 TP53TG3Q9ULZ0 132 aa15.66■□□□□ 0.1
C9orf3-222ENST00000496567 COL7A1Q02388 2944 aa15.65■□□□□ 0.1
C9orf3-222ENST00000496567 HUWE1Q7Z6Z7 4374 aaKnown RBP15.65■□□□□ 0.1
C9orf3-222ENST00000496567 IGKV3D-20A0A0C4DH25 116 aa15.65■□□□□ 0.1
C9orf3-222ENST00000496567 M0R036 132 aa15.65■□□□□ 0.1
C9orf3-222ENST00000496567 GNRH2O43555 120 aa15.64■□□□□ 0.09
C9orf3-222ENST00000496567 P01737 135 aa15.64■□□□□ 0.09
C9orf3-222ENST00000496567 TYMSP04818 313 aa15.64■□□□□ 0.09
C9orf3-222ENST00000496567 RPL23P62829 140 aaKnown RBP15.64■□□□□ 0.09
C9orf3-222ENST00000496567 TENM3Q9P273 2699 aa15.64■□□□□ 0.09
C9orf3-222ENST00000496567 A0A0J9YWU9 116 aa15.63■□□□□ 0.09
C9orf3-222ENST00000496567 SNURFLB1AK76 121 aa15.63■□□□□ 0.09
C9orf3-222ENST00000496567 DEFB4AO15263 64 aa15.63■□□□□ 0.09
C9orf3-222ENST00000496567 EMP1P54849 157 aa15.63■□□□□ 0.09
C9orf3-222ENST00000496567 ZNF415Q09FC8 603 aa15.63■□□□□ 0.09
C9orf3-222ENST00000496567 ADIRFQ15847 76 aa15.63■□□□□ 0.09
C9orf3-222ENST00000496567 ATRAIDQ6UW56 229 aa15.63■□□□□ 0.09
C9orf3-222ENST00000496567 FAM231DQ6ZW35 169 aa15.62■□□□□ 0.09
C9orf3-222ENST00000496567 C11orf72Q8NBR9 251 aa15.62■□□□□ 0.09
C9orf3-222ENST00000496567 CLRN3Q8NCR9 226 aa15.62■□□□□ 0.09
C9orf3-222ENST00000496567 NUDT10Q8NFP7 164 aa15.62■□□□□ 0.09
C9orf3-222ENST00000496567 NUDT11Q96G61 164 aa15.62■□□□□ 0.09
C9orf3-222ENST00000496567 TIMM8BQ9Y5J9 83 aaPredicted RBP15.62■□□□□ 0.09
C9orf3-222ENST00000496567 SNAPINO95295 136 aa15.62■□□□□ 0.09
C9orf3-222ENST00000496567 ERVFC1-1P60608 527 aa15.62■□□□□ 0.09
C9orf3-222ENST00000496567 RNASE7Q9H1E1 156 aaKnown RBP15.62■□□□□ 0.09
C9orf3-222ENST00000496567 GSN-AS1Q9NRJ2 163 aa15.62■□□□□ 0.09
C9orf3-222ENST00000496567 TMSB15BA0A087X1C1 80 aa15.61■□□□□ 0.09
C9orf3-222ENST00000496567 IGHV3-16A0A0C4DH30 117 aa15.61■□□□□ 0.09
C9orf3-222ENST00000496567 PLAC8L1A1L4L8 177 aa15.61■□□□□ 0.09
C9orf3-222ENST00000496567 ASIPP42127 132 aa15.61■□□□□ 0.09
C9orf3-222ENST00000496567 TCL1AP56279 114 aa15.61■□□□□ 0.09
C9orf3-222ENST00000496567 PNRC1Q12796 327 aaPredicted RBP15.61■□□□□ 0.09
C9orf3-222ENST00000496567 OR2D3Q8NGH3 330 aa15.61■□□□□ 0.09
C9orf3-222ENST00000496567 ISOC2Q96AB3 205 aa15.61■□□□□ 0.09
C9orf3-222ENST00000496567 MDFICQ9P1T7 246 aa15.61■□□□□ 0.09
C9orf3-222ENST00000496567 XKRY2A2RUG3 117 aa15.6■□□□□ 0.09
C9orf3-222ENST00000496567 CXCL1P09341 107 aa15.6■□□□□ 0.09
C9orf3-222ENST00000496567 S100A4P26447 101 aaKnown RBP15.6■□□□□ 0.09
C9orf3-222ENST00000496567 RPS20P60866 119 aaKnown RBP15.6■□□□□ 0.09
C9orf3-222ENST00000496567 TEX48A0A1B0GUV7 120 aa15.59■□□□□ 0.09
C9orf3-222ENST00000496567 RPL19P84098 196 aaKnown RBP15.59■□□□□ 0.09
C9orf3-222ENST00000496567 DAZ2Q13117 558 aaKnown RBP15.59■□□□□ 0.09
C9orf3-222ENST00000496567 DNLZQ5SXM8 178 aa15.59■□□□□ 0.09
C9orf3-222ENST00000496567 C15orf54Q8N8G6 183 aa15.59■□□□□ 0.09
C9orf3-222ENST00000496567 SPXQ9BT56 116 aa15.59■□□□□ 0.09
C9orf3-222ENST00000496567 RPP21Q9H633 154 aaKnown RBP15.59■□□□□ 0.09
C9orf3-222ENST00000496567 OSTCQ9NRP0 149 aa15.59■□□□□ 0.09
C9orf3-222ENST00000496567 LYRM9A8MSI8 78 aa15.58■□□□□ 0.09
C9orf3-222ENST00000496567 GATCO43716 136 aaKnown RBP15.58■□□□□ 0.09
C9orf3-222ENST00000496567 SPART-AS1P0CW21 52 aa15.58■□□□□ 0.09
C9orf3-222ENST00000496567 NOP10Q9NPE3 64 aaKnown RBP15.58■□□□□ 0.09
C9orf3-222ENST00000496567 GRIFINA4D1Z8 144 aa15.58■□□□□ 0.08
C9orf3-222ENST00000496567 SCO1O75880 301 aa15.58■□□□□ 0.08
C9orf3-222ENST00000496567 IL17DQ8TAD2 202 aa15.58■□□□□ 0.08
C9orf3-222ENST00000496567 SFRP2Q96HF1 295 aa15.58■□□□□ 0.08
C9orf3-222ENST00000496567 DKK2Q9UBU2 259 aa15.58■□□□□ 0.08
C9orf3-222ENST00000496567 FAM222AQ5U5X8 452 aa15.57■□□□□ 0.08
C9orf3-222ENST00000496567 ZNF575Q86XF7 245 aa15.57■□□□□ 0.08
C9orf3-222ENST00000496567 EDA2RQ9HAV5 297 aa15.57■□□□□ 0.08
C9orf3-222ENST00000496567 IL36BQ9NZH7 164 aa15.57■□□□□ 0.08
C9orf3-222ENST00000496567 C7orf77A4D0Y5 90 aa15.56■□□□□ 0.08
C9orf3-222ENST00000496567 CXorf65A6NEN9 183 aa15.56■□□□□ 0.08
C9orf3-222ENST00000496567 RNASE3P12724 160 aaKnown RBP15.56■□□□□ 0.08
C9orf3-222ENST00000496567 CT83Q5H943 113 aa15.55■□□□□ 0.08
C9orf3-222ENST00000496567 OR10G8Q8NGN5 311 aa15.55■□□□□ 0.08
C9orf3-222ENST00000496567 C9orf85Q96MD7 179 aa15.55■□□□□ 0.08
C9orf3-222ENST00000496567 RPS10P5Q9NQ39 176 aa15.55■□□□□ 0.08
C9orf3-222ENST00000496567 H3BVH4 76 aa15.54■□□□□ 0.08
C9orf3-222ENST00000496567 RHEBQ15382 184 aa15.54■□□□□ 0.08
C9orf3-222ENST00000496567 LGALS9BQ3B8N2 356 aa15.54■□□□□ 0.08
C9orf3-222ENST00000496567 C11orf45Q8TAV5 145 aa15.54■□□□□ 0.08
C9orf3-222ENST00000496567 CELA1Q9UNI1 258 aa15.54■□□□□ 0.08
C9orf3-222ENST00000496567 A8MWL6 223 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms