RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 C9JCJ5 164 aa8.77□□□□□ -1.01
USF1-207ENST00000496363 INMT-MINDY4F8WBC2 141 aa8.77□□□□□ -1.01
USF1-207ENST00000496363 M0R2P5 195 aa8.77□□□□□ -1.01
USF1-207ENST00000496363 UPK1BO75841 260 aa8.77□□□□□ -1.01
USF1-207ENST00000496363 MPC2O95563 127 aa8.77□□□□□ -1.01
USF1-207ENST00000496363 TAS2R45P59539 299 aa8.77□□□□□ -1.01
USF1-207ENST00000496363 GNG5P63218 68 aa8.77□□□□□ -1.01
USF1-207ENST00000496363 CYCSP99999 105 aaKnown RBP8.77□□□□□ -1.01
USF1-207ENST00000496363 CMTM2Q8TAZ6 248 aa8.77□□□□□ -1.01
USF1-207ENST00000496363 SCGB1C1Q8TD33 95 aa8.77□□□□□ -1.01
USF1-207ENST00000496363 TMED6Q8WW62 240 aa8.77□□□□□ -1.01
USF1-207ENST00000496363 WFDC1Q9HC57 220 aa8.77□□□□□ -1.01
USF1-207ENST00000496363 MBD2Q9UBB5 411 aa8.77□□□□□ -1.01
USF1-207ENST00000496363 HMGB3O15347 200 aaKnown RBP8.76□□□□□ -1.01
USF1-207ENST00000496363 SMR3BP02814 79 aaPredicted RBP8.76□□□□□ -1.01
USF1-207ENST00000496363 GCSHP23434 173 aa8.76□□□□□ -1.01
USF1-207ENST00000496363 RPL12P30050 165 aaKnown RBP8.76□□□□□ -1.01
USF1-207ENST00000496363 RAB2AP61019 212 aa8.76□□□□□ -1.01
USF1-207ENST00000496363 LINC00299Q6ZSB3 139 aa8.76□□□□□ -1.01
USF1-207ENST00000496363 NHLRC2Q8NBF2 726 aa8.76□□□□□ -1.01
USF1-207ENST00000496363 SGK494Q96LW2 274 aa8.76□□□□□ -1.01
USF1-207ENST00000496363 TRAV21A0A0B4J279 112 aa8.75□□□□□ -1.01
USF1-207ENST00000496363 K7EP13 123 aa8.75□□□□□ -1.01
USF1-207ENST00000496363 GATA1P15976 413 aaPredicted RBP8.75□□□□□ -1.01
USF1-207ENST00000496363 PPT1P50897 306 aa8.75□□□□□ -1.01
USF1-207ENST00000496363 FRZBQ92765 325 aa8.75□□□□□ -1.01
USF1-207ENST00000496363 TREM1Q9NP99 234 aa8.75□□□□□ -1.01
USF1-207ENST00000496363 SSNA1O43805 119 aa8.74□□□□□ -1.01
USF1-207ENST00000496363 C10orf126Q8N4M7 172 aa8.74□□□□□ -1.01
USF1-207ENST00000496363 SDF2L1Q9HCN8 221 aa8.74□□□□□ -1.01
USF1-207ENST00000496363 IGLV5-52A0A0A0MRZ9 124 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 IGHV3-38A0A0C4DH36 116 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 LRCOL1A6NCL2 159 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 FBLL1A6NHQ2 334 aaKnown RBP8.73□□□□□ -1.01
USF1-207ENST00000496363 PSCAO43653 123 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 PET100P0DJ07 73 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 ZNF80P51504 273 aaPredicted RBP8.73□□□□□ -1.01
USF1-207ENST00000496363 TIRAPP58753 221 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 ACOT6Q3I5F7 207 aaPredicted RBP8.73□□□□□ -1.01
USF1-207ENST00000496363 FAM74A1Q5RGS3 127 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 DPPA3Q6W0C5 159 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 PQLC2Q6ZP29 291 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 ASB13Q8WXK3 278 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 MARVELD1Q9BSK0 173 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 Q9HAA7 133 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 C11orf21Q9P2W6 132 aa8.73□□□□□ -1.01
USF1-207ENST00000496363 IGHV3-73A0A0B4J1V6 119 aa8.72□□□□□ -1.01
USF1-207ENST00000496363 A0A1W2PPV4 95 aa8.72□□□□□ -1.01
USF1-207ENST00000496363 LINC01556Q5JQF7 62 aa8.72□□□□□ -1.01
USF1-207ENST00000496363 CFAP126Q5VTH2 177 aa8.72□□□□□ -1.01
USF1-207ENST00000496363 SH2D6Q7Z4S9 175 aa8.72□□□□□ -1.01
USF1-207ENST00000496363 SLC25A29Q8N8R3 303 aa8.72□□□□□ -1.01
USF1-207ENST00000496363 TMEM75Q8N9X5 138 aa8.72□□□□□ -1.01
USF1-207ENST00000496363 KCNS1Q96KK3 526 aa8.72□□□□□ -1.01
USF1-207ENST00000496363 IBA57-AS1B1ANH7 110 aa8.71□□□□□ -1.02
USF1-207ENST00000496363 RS1O15537 224 aa8.71□□□□□ -1.02
USF1-207ENST00000496363 IGHV3-30P01768 117 aa8.71□□□□□ -1.02
USF1-207ENST00000496363 IGHV3-33P01772 117 aa8.71□□□□□ -1.02
USF1-207ENST00000496363 ARL14EPLP0DKL9 152 aa8.71□□□□□ -1.02
USF1-207ENST00000496363 IGHV3-30-3P0DP02 117 aa8.71□□□□□ -1.02
USF1-207ENST00000496363 IGHV3-30-5P0DP03 117 aa8.71□□□□□ -1.02
USF1-207ENST00000496363 ZNF876PQ49A33 203 aa8.71□□□□□ -1.02
USF1-207ENST00000496363 OR10J3Q5JRS4 329 aa8.71□□□□□ -1.02
USF1-207ENST00000496363 OR10G9Q8NGN4 311 aa8.71□□□□□ -1.02
USF1-207ENST00000496363 OR10G7Q8NGN6 311 aa8.71□□□□□ -1.02
USF1-207ENST00000496363 PFN1P07737 140 aaKnown RBP8.7□□□□□ -1.02
USF1-207ENST00000496363 Q8N3U1 123 aa8.7□□□□□ -1.02
USF1-207ENST00000496363 ARL6IP6Q8N6S5 226 aa8.7□□□□□ -1.02
USF1-207ENST00000496363 TRAV8-6A0A0B4J262 113 aa8.69□□□□□ -1.02
USF1-207ENST00000496363 GCGP01275 180 aa8.69□□□□□ -1.02
USF1-207ENST00000496363 TCRAP04437 139 aa8.69□□□□□ -1.02
USF1-207ENST00000496363 CDC34P49427 236 aaPredicted RBP8.69□□□□□ -1.02
USF1-207ENST00000496363 RHOHQ15669 191 aa8.69□□□□□ -1.02
USF1-207ENST00000496363 Q8N814 137 aa8.69□□□□□ -1.02
USF1-207ENST00000496363 NTN5Q8WTR8 489 aaPredicted RBP8.69□□□□□ -1.02
USF1-207ENST00000496363 C9orf85Q96MD7 179 aa8.69□□□□□ -1.02
USF1-207ENST00000496363 PRADC1Q9BSG0 188 aa8.69□□□□□ -1.02
USF1-207ENST00000496363 NDFIP1Q9BT67 221 aa8.69□□□□□ -1.02
USF1-207ENST00000496363 FAM30AQ9NZY2 134 aa8.69□□□□□ -1.02
USF1-207ENST00000496363 PSG8Q9UQ74 426 aa8.69□□□□□ -1.02
USF1-207ENST00000496363 TRBV6-4A0A1B0GX49 114 aa8.68□□□□□ -1.02
USF1-207ENST00000496363 PGPEP1LA6NFU8 196 aa8.68□□□□□ -1.02
USF1-207ENST00000496363 IGLV2-11P01706 119 aa8.68□□□□□ -1.02
USF1-207ENST00000496363 STAG3L2P0CL84 134 aa8.68□□□□□ -1.02
USF1-207ENST00000496363 STAG3L3P0CL85 134 aa8.68□□□□□ -1.02
USF1-207ENST00000496363 WFDC2Q14508 124 aa8.68□□□□□ -1.02
USF1-207ENST00000496363 ZNF506Q5JVG8 444 aa8.68□□□□□ -1.02
USF1-207ENST00000496363 LELP1Q5T871 98 aa8.68□□□□□ -1.02
USF1-207ENST00000496363 Q6ZSN1 163 aa8.68□□□□□ -1.02
USF1-207ENST00000496363 C5orf17Q8NAS9 161 aa8.68□□□□□ -1.02
USF1-207ENST00000496363 HSD17B11Q8NBQ5 300 aa8.68□□□□□ -1.02
USF1-207ENST00000496363 TMEM70Q9BUB7 260 aa8.68□□□□□ -1.02
USF1-207ENST00000496363 GGTLC3B5MD39 225 aa8.67□□□□□ -1.02
USF1-207ENST00000496363 FAM229AH3BQW9 127 aa8.67□□□□□ -1.02
USF1-207ENST00000496363 TAAR5O14804 337 aa8.67□□□□□ -1.02
USF1-207ENST00000496363 RNASE3P12724 160 aaKnown RBP8.67□□□□□ -1.02
USF1-207ENST00000496363 GCHFRP30047 84 aa8.67□□□□□ -1.02
USF1-207ENST00000496363 PRNTQ86SH4 94 aa8.67□□□□□ -1.02
USF1-207ENST00000496363 RAB24Q969Q5 203 aa8.67□□□□□ -1.02
USF1-207ENST00000496363 SERTM2A0A1B0GWG4 89 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms