RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SLC17A2O00624 439 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 PSCAO43653 123 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 NXPH4O95158 308 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 INSP01308 110 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 PRM2P04554 102 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 LINC00614P0C842 121 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 RD3LP0DJH9 198 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 LPAR6P43657 344 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 KRTAP10-4P60372 401 aaPredicted RBP6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 SRSF9Q13242 221 aaKnown RBP eCLIP6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 EBLN2Q6P2I7 272 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 OR13C8Q8NGS7 320 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 SEC22AQ96IW7 307 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 SCGB3A2Q96PL1 93 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 PARD6GQ9BYG4 376 aaPredicted RBP6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 ACTR3CQ9C0K3 210 aaPredicted RBP6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 FKBP11Q9NYL4 201 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 MSRB1Q9NZV6 116 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 DOK5Q9P104 306 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 PRNDQ9UKY0 176 aa6.47□□□□□ -1.37
SMARCAL1-213ENST00000496037 UMAD1C9J7I0 102 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 H3BNG1 76 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 METTL15P1P0C7V9 234 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 SNCAP37840 140 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 ID1P41134 155 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 RPS10P46783 165 aaKnown RBP6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 HERV-K104P61576 105 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 PPP1R1AQ13522 171 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 SURF2Q15527 256 aaPredicted RBP6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 GUK1Q16774 197 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 FAM78BQ5VT40 261 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 SUMO4Q6EEV6 95 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 Q6ZSA8 131 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST3H2BBQ8N257 126 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 OR51H1Q8NH63 302 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 RNASEH2CQ8TDP1 164 aaKnown RBP6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 SECTM1Q8WVN6 248 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 FAM3DQ96BQ1 224 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 C8orf49Q96NF6 230 aa6.46□□□□□ -1.38
SMARCAL1-213ENST00000496037 PLAC8L1A1L4L8 177 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 C9JQL5 133 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 OR5AC1P0C628 307 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 MT1HL1P0DM35 61 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST1H1DP16402 221 aaKnown RBP6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 JOSD1Q15040 202 aaPredicted RBP6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 MSMO1Q15800 293 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 KHDC3LQ587J8 217 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 AKR1C8PQ5T2L2 129 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 AADACL3Q5VUY0 350 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 Q6ZVQ6 151 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 SCXQ7RTU7 201 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 CMTM1Q8IZ96 169 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 HSD17B11Q8NBQ5 300 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 C16orf74Q96GX8 76 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 C2orf50Q96LR7 162 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 KRTAP4-2Q9BYR5 136 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 CCL28Q9NRJ3 127 aa6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 TIMM8BQ9Y5J9 83 aaPredicted RBP6.45□□□□□ -1.38
SMARCAL1-213ENST00000496037 BORCS7-ASMTA0A0B4J1R7 106 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 SFT2D2O95562 160 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 GCGP01275 180 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 SEC11BP0C7V7 166 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 DTYMKP23919 212 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 AKR1C3P42330 323 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 PSMB3P49720 205 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 PAX9P55771 341 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 ERHP84090 104 aaKnown RBP6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 RIGQ13278 110 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 SCGB2B2Q4G0G5 96 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 BOD1L2Q8IYS8 172 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 Q8N814 137 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 ZNF738Q8NE65 137 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 ARV1Q9H2C2 271 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 LY96Q9Y6Y9 160 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 MUC2Q02817 5179 aa6.44□□□□□ -1.38
SMARCAL1-213ENST00000496037 A0A096LPF7 62 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 B4DEV8 164 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 F6UB75 175 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 M0R143 59 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 AGPAT2O15120 278 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 KRASP01116 189 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 PMP2P02689 132 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 AZU1P20160 251 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 PRCDQ00LT1 54 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 ARL16Q0P5N6 197 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 TMEM128Q5BJH2 165 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 OR8G2PQ6IF36 304 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 PACRGQ96M98 296 aaPredicted RBP6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 PRO1933Q9H354 126 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 NOP10Q9NPE3 64 aaKnown RBP6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 RAB22AQ9UL26 194 aa6.43□□□□□ -1.38
SMARCAL1-213ENST00000496037 A0A0J9YX75 114 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 LRCOL1A6NCL2 159 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 MEIS3P1A6NDR6 274 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 K7EP13 123 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 CORTO00230 105 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 DLEU1O43261 78 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST1H2BKO60814 126 aa6.42□□□□□ -1.38
SMARCAL1-213ENST00000496037 HIST1H2BJP06899 126 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms