RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 K7EP13 123 aa12.52□□□□□ -0.41
CLCNKA-207ENST00000495784 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.41
CLCNKA-207ENST00000495784 GNRH2O43555 120 aa12.52□□□□□ -0.41
CLCNKA-207ENST00000495784 RAB2AP61019 212 aa12.52□□□□□ -0.41
CLCNKA-207ENST00000495784 WFDC10BQ8IUB3 73 aa12.52□□□□□ -0.41
CLCNKA-207ENST00000495784 ARL6IP6Q8N6S5 226 aa12.52□□□□□ -0.41
CLCNKA-207ENST00000495784 SDF2L1Q9HCN8 221 aa12.52□□□□□ -0.41
CLCNKA-207ENST00000495784 TRAV8-1A0A0A6YYK1 113 aa12.51□□□□□ -0.41
CLCNKA-207ENST00000495784 FUSP35637 526 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLCNKA-207ENST00000495784 CDPF1Q6NVV7 123 aa12.51□□□□□ -0.41
CLCNKA-207ENST00000495784 OR10G9Q8NGN4 311 aa12.51□□□□□ -0.41
CLCNKA-207ENST00000495784 OR10G7Q8NGN6 311 aa12.51□□□□□ -0.41
CLCNKA-207ENST00000495784 MSRB1Q9NZV6 116 aa12.51□□□□□ -0.41
CLCNKA-207ENST00000495784 TYMSP04818 313 aa12.5□□□□□ -0.41
CLCNKA-207ENST00000495784 GNG5P63218 68 aa12.5□□□□□ -0.41
CLCNKA-207ENST00000495784 TVP23CQ96ET8 276 aa12.5□□□□□ -0.41
CLCNKA-207ENST00000495784 KCNS1Q96KK3 526 aa12.5□□□□□ -0.41
CLCNKA-207ENST00000495784 NDFIP1Q9BT67 221 aa12.5□□□□□ -0.41
CLCNKA-207ENST00000495784 A0A087WTM6 91 aa12.49□□□□□ -0.41
CLCNKA-207ENST00000495784 DNAH10OSP0CZ25 163 aa12.49□□□□□ -0.41
CLCNKA-207ENST00000495784 ARL14EPLP0DKL9 152 aa12.49□□□□□ -0.41
CLCNKA-207ENST00000495784 SH2D6Q7Z4S9 175 aa12.49□□□□□ -0.41
CLCNKA-207ENST00000495784 NHLRC2Q8NBF2 726 aa12.49□□□□□ -0.41
CLCNKA-207ENST00000495784 ASB13Q8WXK3 278 aa12.49□□□□□ -0.41
CLCNKA-207ENST00000495784 CRYGDP07320 174 aa12.48□□□□□ -0.41
CLCNKA-207ENST00000495784 CDC34P49427 236 aaPredicted RBP12.48□□□□□ -0.41
CLCNKA-207ENST00000495784 C10orf126Q8N4M7 172 aa12.48□□□□□ -0.41
CLCNKA-207ENST00000495784 SGK494Q96LW2 274 aa12.48□□□□□ -0.41
CLCNKA-207ENST00000495784 LOC100131303A0A0U1RQF7 123 aa12.47□□□□□ -0.41
CLCNKA-207ENST00000495784 SERTM2A0A1B0GWG4 89 aa12.47□□□□□ -0.41
CLCNKA-207ENST00000495784 PPT1P50897 306 aa12.47□□□□□ -0.41
CLCNKA-207ENST00000495784 K7EQM0 130 aa12.46□□□□□ -0.41
CLCNKA-207ENST00000495784 C5orf17Q8NAS9 161 aa12.46□□□□□ -0.41
CLCNKA-207ENST00000495784 HSD17B11Q8NBQ5 300 aa12.46□□□□□ -0.41
CLCNKA-207ENST00000495784 FBLL1A6NHQ2 334 aaKnown RBP12.45□□□□□ -0.42
CLCNKA-207ENST00000495784 EPM2AB3EWF7 344 aa12.45□□□□□ -0.42
CLCNKA-207ENST00000495784 TCRAP04437 139 aa12.45□□□□□ -0.42
CLCNKA-207ENST00000495784 STAG3L2P0CL84 134 aa12.45□□□□□ -0.42
CLCNKA-207ENST00000495784 STAG3L3P0CL85 134 aa12.45□□□□□ -0.42
CLCNKA-207ENST00000495784 GATA1P15976 413 aaPredicted RBP12.45□□□□□ -0.42
CLCNKA-207ENST00000495784 ZNF876PQ49A33 203 aa12.45□□□□□ -0.42
CLCNKA-207ENST00000495784 OR2G3Q8NGZ4 309 aa12.45□□□□□ -0.42
CLCNKA-207ENST00000495784 RAB24Q969Q5 203 aa12.45□□□□□ -0.42
CLCNKA-207ENST00000495784 ALG5Q9Y673 324 aa12.45□□□□□ -0.42
CLCNKA-207ENST00000495784 IGHV3-38A0A0C4DH36 116 aa12.44□□□□□ -0.42
CLCNKA-207ENST00000495784 TAAR5O14804 337 aa12.44□□□□□ -0.42
CLCNKA-207ENST00000495784 GCHFRP30047 84 aa12.44□□□□□ -0.42
CLCNKA-207ENST00000495784 TIRAPP58753 221 aa12.44□□□□□ -0.42
CLCNKA-207ENST00000495784 PSMG3Q9BT73 122 aaPredicted RBP12.44□□□□□ -0.42
CLCNKA-207ENST00000495784 GCGP01275 180 aa12.43□□□□□ -0.42
CLCNKA-207ENST00000495784 MBP02144 154 aa12.43□□□□□ -0.42
CLCNKA-207ENST00000495784 PFN1P07737 140 aaKnown RBP12.43□□□□□ -0.42
CLCNKA-207ENST00000495784 ZFP69Q49AA0 526 aa12.43□□□□□ -0.42
CLCNKA-207ENST00000495784 PRADC1Q9BSG0 188 aa12.43□□□□□ -0.42
CLCNKA-207ENST00000495784 PSG8Q9UQ74 426 aa12.43□□□□□ -0.42
CLCNKA-207ENST00000495784 TRAV8-6A0A0B4J262 113 aa12.42□□□□□ -0.42
CLCNKA-207ENST00000495784 PSCAO43653 123 aa12.42□□□□□ -0.42
CLCNKA-207ENST00000495784 CIDEAO60543 219 aa12.42□□□□□ -0.42
CLCNKA-207ENST00000495784 ATP6V0CP27449 155 aa12.42□□□□□ -0.42
CLCNKA-207ENST00000495784 ZNF80P51504 273 aaPredicted RBP12.42□□□□□ -0.42
CLCNKA-207ENST00000495784 KRTAP10-1P60331 282 aa12.42□□□□□ -0.42
CLCNKA-207ENST00000495784 RHOHQ15669 191 aa12.42□□□□□ -0.42
CLCNKA-207ENST00000495784 SLC25A29Q8N8R3 303 aa12.42□□□□□ -0.42
CLCNKA-207ENST00000495784 AQP10Q96PS8 301 aa12.42□□□□□ -0.42
CLCNKA-207ENST00000495784 TMEM167BQ9NRX6 74 aa12.42□□□□□ -0.42
CLCNKA-207ENST00000495784 C11orf21Q9P2W6 132 aa12.42□□□□□ -0.42
CLCNKA-207ENST00000495784 RS1O15537 224 aa12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 CXorf1O96002 111 aa12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 XGP55808 180 aa12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 SUMO1P63165 101 aaKnown RBP12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 SERF2P84101 59 aa12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 FLI1Q01543 452 aaPredicted RBP12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 SMUG1Q53HV7 270 aa12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 OR10J3Q5JRS4 329 aa12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 CFAP126Q5VTH2 177 aa12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 PRNTQ86SH4 94 aa12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 SUN5Q8TC36 379 aa12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 EPDR1Q9UM22 224 aa12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 BOLA1Q9Y3E2 137 aa12.41□□□□□ -0.42
CLCNKA-207ENST00000495784 IGHV3-73A0A0B4J1V6 119 aa12.4□□□□□ -0.42
CLCNKA-207ENST00000495784 TRBV6-4A0A1B0GX49 114 aa12.4□□□□□ -0.42
CLCNKA-207ENST00000495784 GGTLC3B5MD39 225 aa12.4□□□□□ -0.42
CLCNKA-207ENST00000495784 LINC01556Q5JQF7 62 aa12.4□□□□□ -0.42
CLCNKA-207ENST00000495784 CYB561D1Q8N8Q1 229 aa12.4□□□□□ -0.42
CLCNKA-207ENST00000495784 TMEM75Q8N9X5 138 aa12.4□□□□□ -0.42
CLCNKA-207ENST00000495784 ACTR3CQ9C0K3 210 aaPredicted RBP12.4□□□□□ -0.42
CLCNKA-207ENST00000495784 MED28Q9H204 178 aa12.4□□□□□ -0.42
CLCNKA-207ENST00000495784 IGLV2-11P01706 119 aa12.39□□□□□ -0.43
CLCNKA-207ENST00000495784 GCSHP23434 173 aa12.39□□□□□ -0.43
CLCNKA-207ENST00000495784 DPPA3Q6W0C5 159 aa12.39□□□□□ -0.43
CLCNKA-207ENST00000495784 C9orf85Q96MD7 179 aa12.39□□□□□ -0.43
CLCNKA-207ENST00000495784 SH3BGRL3Q9H299 93 aa12.39□□□□□ -0.43
CLCNKA-207ENST00000495784 ZNF506Q5JVG8 444 aa12.38□□□□□ -0.43
CLCNKA-207ENST00000495784 SAPCD1Q5SSQ6 148 aa12.38□□□□□ -0.43
CLCNKA-207ENST00000495784 FRZBQ92765 325 aa12.38□□□□□ -0.43
CLCNKA-207ENST00000495784 TNFSF18Q9UNG2 199 aa12.38□□□□□ -0.43
CLCNKA-207ENST00000495784 PGPEP1LA6NFU8 196 aa12.37□□□□□ -0.43
CLCNKA-207ENST00000495784 IBA57-AS1B1ANH7 110 aa12.37□□□□□ -0.43
CLCNKA-207ENST00000495784 MGST1P10620 155 aaKnown RBP12.37□□□□□ -0.43
CLCNKA-207ENST00000495784 PTH2Q96A98 100 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms