RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 C11orf1Q9H5F2 150 aa8.77□□□□□ -1.01
COL1A1-209ENST00000495677 GSKIPQ9P0R6 139 aa8.77□□□□□ -1.01
COL1A1-209ENST00000495677 L7N2F9 121 aa8.76□□□□□ -1.01
COL1A1-209ENST00000495677 LYRM1O43325 122 aa8.76□□□□□ -1.01
COL1A1-209ENST00000495677 GNRH2O43555 120 aa8.76□□□□□ -1.01
COL1A1-209ENST00000495677 S100A11P31949 105 aa8.76□□□□□ -1.01
COL1A1-209ENST00000495677 VAMP2P63027 116 aa8.76□□□□□ -1.01
COL1A1-209ENST00000495677 MITD1Q8WV92 249 aa8.76□□□□□ -1.01
COL1A1-209ENST00000495677 CCDC32Q9BV29 185 aa8.76□□□□□ -1.01
COL1A1-209ENST00000495677 OR51M1Q9H341 326 aa8.76□□□□□ -1.01
COL1A1-209ENST00000495677 LRP2P98164 4655 aa8.75□□□□□ -1.01
COL1A1-209ENST00000495677 TRAV6A0A075B6T7 132 aa8.75□□□□□ -1.01
COL1A1-209ENST00000495677 GGTLC3B5MD39 225 aa8.75□□□□□ -1.01
COL1A1-209ENST00000495677 CST7O76096 145 aa8.75□□□□□ -1.01
COL1A1-209ENST00000495677 CSN1S1P47710 185 aa8.75□□□□□ -1.01
COL1A1-209ENST00000495677 RPL37AP61513 92 aaKnown RBP8.75□□□□□ -1.01
COL1A1-209ENST00000495677 ATP6V1FQ16864 119 aa8.75□□□□□ -1.01
COL1A1-209ENST00000495677 PAXXQ9BUH6 204 aa8.75□□□□□ -1.01
COL1A1-209ENST00000495677 FAM24AA6NFZ4 105 aa8.74□□□□□ -1.01
COL1A1-209ENST00000495677 PLA2G10O15496 165 aa8.74□□□□□ -1.01
COL1A1-209ENST00000495677 BCAP31P51572 246 aa8.74□□□□□ -1.01
COL1A1-209ENST00000495677 HNRNPA3P51991 378 aaKnown RBP8.74□□□□□ -1.01
COL1A1-209ENST00000495677 BAXQ07812 192 aa8.74□□□□□ -1.01
COL1A1-209ENST00000495677 Q6ZRU5 148 aa8.74□□□□□ -1.01
COL1A1-209ENST00000495677 DAZ4Q86SG3 579 aaKnown RBP8.74□□□□□ -1.01
COL1A1-209ENST00000495677 RMI2Q96E14 147 aa8.74□□□□□ -1.01
COL1A1-209ENST00000495677 DAZ3Q9NR90 486 aaKnown RBP8.74□□□□□ -1.01
COL1A1-209ENST00000495677 RNF213Q63HN8 5207 aa8.73□□□□□ -1.01
COL1A1-209ENST00000495677 TRAV8-1A0A0A6YYK1 113 aa8.73□□□□□ -1.01
COL1A1-209ENST00000495677 TYMSP04818 313 aa8.73□□□□□ -1.01
COL1A1-209ENST00000495677 MGST1P10620 155 aaKnown RBP8.73□□□□□ -1.01
COL1A1-209ENST00000495677 SULT1A1P50225 295 aa8.73□□□□□ -1.01
COL1A1-209ENST00000495677 CAV2P51636 162 aa8.73□□□□□ -1.01
COL1A1-209ENST00000495677 CFAP126Q5VTH2 177 aa8.73□□□□□ -1.01
COL1A1-209ENST00000495677 Q8N3U1 123 aa8.73□□□□□ -1.01
COL1A1-209ENST00000495677 PTH2Q96A98 100 aa8.73□□□□□ -1.01
COL1A1-209ENST00000495677 FXYD5Q96DB9 178 aa8.73□□□□□ -1.01
COL1A1-209ENST00000495677 KCNS1Q96KK3 526 aa8.73□□□□□ -1.01
COL1A1-209ENST00000495677 ATP5SQ99766 215 aa8.73□□□□□ -1.01
COL1A1-209ENST00000495677 NUDT15Q9NV35 164 aa8.73□□□□□ -1.01
COL1A1-209ENST00000495677 TRAV21A0A0B4J279 112 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 UBE2L5PA0A1B0GUS4 154 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 FAM240BA0A1B0GVZ2 78 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 DIRC3C9JPN6 131 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 UPK1BO75841 260 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 SEC11BP0C7V7 166 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 HBG1P69891 147 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 HBG2P69892 147 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 ZNF876PQ49A33 203 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 GCSAMLQ5JQS6 135 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 MZT2BQ6NZ67 158 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 MIR17HGQ75NE6 70 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 ENKURQ8TC29 256 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 PHYHIPLQ96FC7 376 aa8.72□□□□□ -1.01
COL1A1-209ENST00000495677 A0A087WWC5 75 aa8.71□□□□□ -1.02
COL1A1-209ENST00000495677 TCRBP04435 133 aa8.71□□□□□ -1.02
COL1A1-209ENST00000495677 OR10J4P0C629 311 aa8.71□□□□□ -1.02
COL1A1-209ENST00000495677 FGF7P21781 194 aa8.71□□□□□ -1.02
COL1A1-209ENST00000495677 DPPA3Q6W0C5 159 aa8.71□□□□□ -1.02
COL1A1-209ENST00000495677 LINC00299Q6ZSB3 139 aa8.71□□□□□ -1.02
COL1A1-209ENST00000495677 TMEM252Q8N6L7 170 aa8.71□□□□□ -1.02
COL1A1-209ENST00000495677 ARL6IP6Q8N6S5 226 aa8.71□□□□□ -1.02
COL1A1-209ENST00000495677 SEC22CQ9BRL7 303 aa8.71□□□□□ -1.02
COL1A1-209ENST00000495677 NPCDR1Q9BY65 106 aa8.71□□□□□ -1.02
COL1A1-209ENST00000495677 SDF2L1Q9HCN8 221 aa8.71□□□□□ -1.02
COL1A1-209ENST00000495677 LYRM2Q9NU23 88 aaPredicted RBP8.71□□□□□ -1.02
COL1A1-209ENST00000495677 NAGKQ9UJ70 344 aa8.71□□□□□ -1.02
COL1A1-209ENST00000495677 LSM5Q9Y4Y9 91 aaKnown RBP8.71□□□□□ -1.02
COL1A1-209ENST00000495677 LINC00694P0DN24 101 aa8.7□□□□□ -1.02
COL1A1-209ENST00000495677 PVALBP20472 110 aaPredicted RBP8.7□□□□□ -1.02
COL1A1-209ENST00000495677 RANP62826 216 aaKnown RBP8.7□□□□□ -1.02
COL1A1-209ENST00000495677 ATRAIDQ6UW56 229 aa8.7□□□□□ -1.02
COL1A1-209ENST00000495677 TNXBP22105 4242 aa8.69□□□□□ -1.02
COL1A1-209ENST00000495677 CCSO14618 274 aa8.69□□□□□ -1.02
COL1A1-209ENST00000495677 H2AFB2P0C5Z0 115 aa8.69□□□□□ -1.02
COL1A1-209ENST00000495677 C14orf177Q52M58 125 aa8.69□□□□□ -1.02
COL1A1-209ENST00000495677 STX12Q86Y82 276 aa8.69□□□□□ -1.02
COL1A1-209ENST00000495677 CYB561D1Q8N8Q1 229 aa8.69□□□□□ -1.02
COL1A1-209ENST00000495677 OR10G9Q8NGN4 311 aa8.69□□□□□ -1.02
COL1A1-209ENST00000495677 IGKV2D-24A0A075B6R9 120 aa8.68□□□□□ -1.02
COL1A1-209ENST00000495677 IGSF23A1L1A6 192 aa8.68□□□□□ -1.02
COL1A1-209ENST00000495677 C5orf51A6NDU8 294 aa8.68□□□□□ -1.02
COL1A1-209ENST00000495677 FAM25EA8MYX2 175 aa8.68□□□□□ -1.02
COL1A1-209ENST00000495677 IFITM3Q01628 133 aa8.68□□□□□ -1.02
COL1A1-209ENST00000495677 IL15RAQ13261 267 aa8.68□□□□□ -1.02
COL1A1-209ENST00000495677 ASB13Q8WXK3 278 aa8.68□□□□□ -1.02
COL1A1-209ENST00000495677 C2orf50Q96LR7 162 aa8.68□□□□□ -1.02
COL1A1-209ENST00000495677 C9orf85Q96MD7 179 aa8.68□□□□□ -1.02
COL1A1-209ENST00000495677 IGHV3-73A0A0B4J1V6 119 aa8.67□□□□□ -1.02
COL1A1-209ENST00000495677 DEFA1P59665 94 aa8.67□□□□□ -1.02
COL1A1-209ENST00000495677 DEFA3P59666 94 aa8.67□□□□□ -1.02
COL1A1-209ENST00000495677 ZFP2Q6ZN57 461 aa8.67□□□□□ -1.02
COL1A1-209ENST00000495677 NIT1Q86X76 327 aa8.67□□□□□ -1.02
COL1A1-209ENST00000495677 TVP23CQ96ET8 276 aa8.67□□□□□ -1.02
COL1A1-209ENST00000495677 CHCHD7Q9BUK0 85 aa8.67□□□□□ -1.02
COL1A1-209ENST00000495677 PGPEP1LA6NFU8 196 aa8.66□□□□□ -1.02
COL1A1-209ENST00000495677 FGF8P55075 233 aaPredicted RBP8.66□□□□□ -1.02
COL1A1-209ENST00000495677 PIK3CD-AS1Q5SR53 167 aa8.66□□□□□ -1.02
COL1A1-209ENST00000495677 LINC00479Q96M42 142 aa8.66□□□□□ -1.02
COL1A1-209ENST00000495677 TREM1Q9NP99 234 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms