RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	TRAV41	A0A0B4J266	112 aa		10.28	□□□□□ -0.76
SUPT20H-222	ENST00000495071	CEND1	Q8N111	149 aa		10.28	□□□□□ -0.76
SUPT20H-222	ENST00000495071	NRAC	Q8N912	160 aa		10.28	□□□□□ -0.76
SUPT20H-222	ENST00000495071	PIFO	Q8TCI5	191 aa		10.28	□□□□□ -0.76
SUPT20H-222	ENST00000495071	IGF1	P05019	195 aa		10.28	□□□□□ -0.76
SUPT20H-222	ENST00000495071	C9orf47	Q6ZRZ4	202 aa		10.28	□□□□□ -0.76
SUPT20H-222	ENST00000495071	IGLV2-18	A0A075B6J9	118 aa		10.27	□□□□□ -0.76
SUPT20H-222	ENST00000495071	C14orf178	Q8N769	122 aa	Predicted RBP	10.27	□□□□□ -0.76
SUPT20H-222	ENST00000495071	GLMP	Q8WWB7	406 aa		10.27	□□□□□ -0.76
SUPT20H-222	ENST00000495071		A0A087WX48	190 aa		10.27	□□□□□ -0.77
SUPT20H-222	ENST00000495071	LINC01546	A6NGU7	62 aa		10.27	□□□□□ -0.77
SUPT20H-222	ENST00000495071	DEFB1	P60022	68 aa		10.27	□□□□□ -0.77
SUPT20H-222	ENST00000495071	C9orf139	Q6ZV77	190 aa		10.27	□□□□□ -0.77
SUPT20H-222	ENST00000495071	MRPL53	Q96EL3	112 aa	Known RBP	10.27	□□□□□ -0.77
SUPT20H-222	ENST00000495071	SMIM2	Q9BVW6	85 aa		10.27	□□□□□ -0.77
SUPT20H-222	ENST00000495071		A0A1W2PPR1	153 aa		10.27	□□□□□ -0.77
SUPT20H-222	ENST00000495071	OR11H12	B2RN74	326 aa		10.27	□□□□□ -0.77
SUPT20H-222	ENST00000495071	PLN	P26678	52 aa		10.27	□□□□□ -0.77
SUPT20H-222	ENST00000495071	MAPKAPK5-AS1	Q8N8E1	139 aa		10.27	□□□□□ -0.77
SUPT20H-222	ENST00000495071	OR11H1	Q8NG94	326 aa		10.27	□□□□□ -0.77
SUPT20H-222	ENST00000495071	OR11H2	Q8NH07	326 aa		10.27	□□□□□ -0.77
SUPT20H-222	ENST00000495071	IGHV3-11	P01762	117 aa		10.26	□□□□□ -0.77
SUPT20H-222	ENST00000495071	ASH1L	Q9NR48	2969 aa	Known RBP	10.26	□□□□□ -0.77
SUPT20H-222	ENST00000495071	ASIP	P42127	132 aa		10.26	□□□□□ -0.77
SUPT20H-222	ENST00000495071	PRR9	Q5T870	116 aa		10.26	□□□□□ -0.77
SUPT20H-222	ENST00000495071		G3V4G9	280 aa		10.26	□□□□□ -0.77
SUPT20H-222	ENST00000495071	C5orf56	Q8N8D9	126 aa		10.26	□□□□□ -0.77
SUPT20H-222	ENST00000495071	MRAP2	Q96G30	205 aa		10.26	□□□□□ -0.77
SUPT20H-222	ENST00000495071	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.26	□□□□□ -0.77
SUPT20H-222	ENST00000495071	TRAV21	A0A0B4J279	112 aa		10.25	□□□□□ -0.77
SUPT20H-222	ENST00000495071		H7C1H1	209 aa		10.25	□□□□□ -0.77
SUPT20H-222	ENST00000495071	RNASE4	P34096	147 aa	Known RBP	10.25	□□□□□ -0.77
SUPT20H-222	ENST00000495071	ZNF479	Q96JC4	524 aa		10.25	□□□□□ -0.77
SUPT20H-222	ENST00000495071	SUMO2	P61956	95 aa	Known RBP	10.25	□□□□□ -0.77
SUPT20H-222	ENST00000495071	LY6E	Q16553	131 aa		10.25	□□□□□ -0.77
SUPT20H-222	ENST00000495071	ORMDL2	Q53FV1	153 aa		10.25	□□□□□ -0.77
SUPT20H-222	ENST00000495071	BRD3OS	Q6XYD6	125 aa		10.25	□□□□□ -0.77
SUPT20H-222	ENST00000495071	C20orf173	Q96LM9	149 aa		10.25	□□□□□ -0.77
SUPT20H-222	ENST00000495071	MOB4	Q9Y3A3	225 aa		10.25	□□□□□ -0.77
SUPT20H-222	ENST00000495071		F8VRH5	84 aa		10.24	□□□□□ -0.77
SUPT20H-222	ENST00000495071	RPL39L	Q96EH5	51 aa	Known RBP	10.24	□□□□□ -0.77
SUPT20H-222	ENST00000495071	UNQ9165/PRO28630	Q6UXU0	137 aa		10.24	□□□□□ -0.77
SUPT20H-222	ENST00000495071	DEFB104A	Q8WTQ1	72 aa		10.24	□□□□□ -0.77
SUPT20H-222	ENST00000495071	LINC00477	Q96M19	166 aa		10.24	□□□□□ -0.77
SUPT20H-222	ENST00000495071	NEGR1	Q7Z3B1	354 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	AJUBA	Q96IF1	538 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	PSMG3-AS1	Q96PY0	264 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	DPH3P1	Q9H4G8	78 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	HIVEP3	Q5T1R4	2406 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	TRBV12-3	P01733	135 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	UCN	P55089	124 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	TM2D2	Q9BX73	214 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	TEX48	A0A1B0GUV7	120 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071		F6UB75	175 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	PF4V1	P10720	104 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	ANXA2R	Q3ZCQ2	193 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	SCGB1D4	Q6XE38	83 aa		10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	HRNR	Q86YZ3	2850 aa	Predicted RBP	10.23	□□□□□ -0.77
SUPT20H-222	ENST00000495071	FAM223B	A6NKX1	122 aa		10.22	□□□□□ -0.77
SUPT20H-222	ENST00000495071	LMO4	P61968	165 aa		10.22	□□□□□ -0.77
SUPT20H-222	ENST00000495071	FAM223A	Q8IWN6	122 aa		10.22	□□□□□ -0.77
SUPT20H-222	ENST00000495071	CYSLTR1	Q9Y271	337 aa		10.22	□□□□□ -0.77
SUPT20H-222	ENST00000495071	OVOL1	O14753	267 aa		10.22	□□□□□ -0.77
SUPT20H-222	ENST00000495071	C12orf74	Q32Q52	190 aa		10.22	□□□□□ -0.77
SUPT20H-222	ENST00000495071	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.22	□□□□□ -0.77	2e-7	■■■■■ 28.7
SUPT20H-222	ENST00000495071	C2orf66	Q6UXQ4	117 aa		10.22	□□□□□ -0.77
SUPT20H-222	ENST00000495071		U3KQE9	123 aa		10.22	□□□□□ -0.77
SUPT20H-222	ENST00000495071	AGRN	O00468	2067 aa		10.22	□□□□□ -0.77
SUPT20H-222	ENST00000495071	ZFHX3	Q15911	3703 aa		10.21	□□□□□ -0.77
SUPT20H-222	ENST00000495071	IGHV4-4	A0A075B6R2	117 aa		10.21	□□□□□ -0.77
SUPT20H-222	ENST00000495071	IGLL5	B9A064	214 aa		10.21	□□□□□ -0.77
SUPT20H-222	ENST00000495071	SRD5A1	P18405	259 aa		10.21	□□□□□ -0.77
SUPT20H-222	ENST00000495071	GNRH2	O43555	120 aa		10.21	□□□□□ -0.77
SUPT20H-222	ENST00000495071	AMTN	Q6UX39	209 aa		10.21	□□□□□ -0.77
SUPT20H-222	ENST00000495071	LCNL1	Q6ZST4	164 aa		10.21	□□□□□ -0.77
SUPT20H-222	ENST00000495071	LENEP	Q9Y5L5	61 aa		10.21	□□□□□ -0.77
SUPT20H-222	ENST00000495071	HLA-DRB4	P13762	266 aa		10.21	□□□□□ -0.78
SUPT20H-222	ENST00000495071	MTURN	Q8N3F0	131 aa		10.21	□□□□□ -0.78
SUPT20H-222	ENST00000495071	RASL10A	Q92737	203 aa		10.21	□□□□□ -0.78
SUPT20H-222	ENST00000495071	HLA-DRB4	X5D2U9	266 aa		10.21	□□□□□ -0.78
SUPT20H-222	ENST00000495071	SPG11	Q96JI7	2443 aa		10.21	□□□□□ -0.78
SUPT20H-222	ENST00000495071		F5H697	171 aa		10.2	□□□□□ -0.78
SUPT20H-222	ENST00000495071		H3BMG7	143 aa		10.2	□□□□□ -0.78
SUPT20H-222	ENST00000495071	ZFAND2A	Q8N6M9	145 aa		10.2	□□□□□ -0.78
SUPT20H-222	ENST00000495071	SPOCK3	Q9BQ16	436 aa		10.2	□□□□□ -0.78
SUPT20H-222	ENST00000495071	MYMX	A0A1B0GTQ4	84 aa		10.2	□□□□□ -0.78
SUPT20H-222	ENST00000495071	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
SUPT20H-222	ENST00000495071	TAL2	Q16559	108 aa		10.2	□□□□□ -0.78
SUPT20H-222	ENST00000495071	WFDC12	Q8WWY7	111 aa		10.2	□□□□□ -0.78
SUPT20H-222	ENST00000495071	PRSS47	A8MTI9	375 aa		10.2	□□□□□ -0.78
SUPT20H-222	ENST00000495071		J3QR89	54 aa		10.19	□□□□□ -0.78
SUPT20H-222	ENST00000495071	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.19	□□□□□ -0.78
SUPT20H-222	ENST00000495071	C20orf78	Q9BR46	151 aa		10.19	□□□□□ -0.78
SUPT20H-222	ENST00000495071	NCOR2	Q9Y618	2525 aa		10.19	□□□□□ -0.78
SUPT20H-222	ENST00000495071	TRAV12-1	A0A0B4J245	112 aa		10.19	□□□□□ -0.78
SUPT20H-222	ENST00000495071	ZNF815P	A8K554	130 aa		10.19	□□□□□ -0.78
SUPT20H-222	ENST00000495071	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.19	□□□□□ -0.78
SUPT20H-222	ENST00000495071	TOMM6	Q96B49	74 aa		10.19	□□□□□ -0.78
SUPT20H-222	ENST00000495071		E9PLD3	99 aa		10.19	□□□□□ -0.78
SUPT20H-222	ENST00000495071	WFDC2	Q14508	124 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms