RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 TSHBP01222 138 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 GATA1P15976 413 aaPredicted RBP3.65□□□□□ -1.83
PRKD3-210ENST00000494667 PSMB8P28062 276 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 TSPEAR-AS2P59090 65 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 TMEM155Q4W5P6 130 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 C10orf55Q5SWW7 151 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 DUX5Q96PT3 197 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 LITAFQ99732 161 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 ZFAND3Q9H8U3 227 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 IGKV3D-20A0A0C4DH25 116 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 F5H768 121 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 H3BTX0 84 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 NTN3O00634 580 aaPredicted RBP3.65□□□□□ -1.83
PRKD3-210ENST00000494667 TRIAP1O43715 76 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 TIMM17BO60830 172 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 SCGB2A1O75556 95 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 C2orf82Q6UX34 121 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 C2orf66Q6UXQ4 117 aa3.65□□□□□ -1.83
PRKD3-210ENST00000494667 TMSB15BA0A087X1C1 80 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 A0A0J9YXY3 114 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 ZNF56Q15929 161 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 RNF7Q9UBF6 113 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 MYO9BQ13459 2157 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 LY6LH3BQJ8 138 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 J3QQQ9 107 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 ZNF22P17026 224 aaPredicted RBP3.64□□□□□ -1.83
PRKD3-210ENST00000494667 MAGEA5P43359 124 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 MFAP4P55083 255 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 GAGE2AQ6NT46 116 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 VKORC1Q9BQB6 163 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 BRWD1Q9NSI6 2320 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 FREM1Q5H8C1 2179 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 M0R3E3 92 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 TRGV3P03979 118 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 DUX4L9Q6RFH8 374 aaPredicted RBP3.64□□□□□ -1.83
PRKD3-210ENST00000494667 ICOSQ9Y6W8 199 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 SEC16AO15027 2179 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 MED12Q93074 2177 aa3.64□□□□□ -1.83
PRKD3-210ENST00000494667 MALP21145 153 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 MDS2Q8NDY4 140 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 TRBV6-5A0A0K0K1A5 114 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 C9orf47Q6ZRZ4 202 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 APRG1Q8IVJ8 170 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 SMCR5Q8TEV8 140 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 CFHR4Q92496 578 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 UBTD1Q9HAC8 227 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 SMAD5-AS1Q9Y6J3 95 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 DSCAMO60469 2012 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 IGKV2-40A0A087WW87 121 aaPredicted RBP3.63□□□□□ -1.83
PRKD3-210ENST00000494667 IGHV1-18A0A0C4DH31 117 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 B9A039 149 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 BUB3O43684 328 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 IGKV2D-40P01614 121 aaPredicted RBP3.63□□□□□ -1.83
PRKD3-210ENST00000494667 CCL8P80075 99 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 TCF15Q12870 199 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 GPHB5Q86YW7 130 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 DYNLRB1Q9NP97 96 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 F8W735 103 aaPredicted RBP3.63□□□□□ -1.83
PRKD3-210ENST00000494667 BCE1O60756 84 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 TRACP01848 142 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 ZNF415Q09FC8 603 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 CEMP1Q6PRD7 247 aaPredicted RBP3.63□□□□□ -1.83
PRKD3-210ENST00000494667 DPH3P1Q9H4G8 78 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 LINC00527Q9UJ94 153 aa3.63□□□□□ -1.83
PRKD3-210ENST00000494667 OXTP01178 125 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 COX6CP09669 75 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 POLR2KP53803 58 aaKnown RBP3.62□□□□□ -1.83
PRKD3-210ENST00000494667 BEAN1Q3B7T3 259 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 KLHL30-AS1Q8NEE0 82 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 C11orf21Q9P2W6 132 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 PCNX2A6NKB5 2137 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 RPL18AQ02543 176 aaKnown RBP3.62□□□□□ -1.83
PRKD3-210ENST00000494667 MSMPQ1L6U9 139 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 NSUN5P1Q3KNT7 163 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 MUSTN1Q8IVN3 82 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 SERP2Q8N6R1 65 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 MSRB2Q9Y3D2 182 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 TRBV7-1A0A0A6YYK4 115 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 IGHV3-48P01763 117 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 EMP1P54849 157 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 HCP5Q6MZN7 132 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 Q6ZS52 159 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 C14orf178Q8N769 122 aaPredicted RBP3.62□□□□□ -1.83
PRKD3-210ENST00000494667 SAP25Q8TEE9 199 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 PRORYQ9H606 182 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 KAAG1Q9UBP8 84 aa3.62□□□□□ -1.83
PRKD3-210ENST00000494667 IGLV11-55A0A075B6I3 123 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 LINC01565O15544 149 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 ZNF883P0CG24 379 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 LGALS3P17931 250 aaKnown RBP3.61□□□□□ -1.83
PRKD3-210ENST00000494667 RHOHQ15669 191 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 HES3Q5TGS1 186 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 Q6JHZ5 121 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 GFRALQ6UXV0 394 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 TIMM21Q9BVV7 248 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 EDA2RQ9HAV5 297 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 SLC25A15Q9Y619 301 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 KIF25-AS1Q9Y6Z4 181 aa3.61□□□□□ -1.83
PRKD3-210ENST00000494667 TNCP24821 2201 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms